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Raman spectroscopy-based detection of RNA viruses in saliva: A preliminary report.
Desai, Sanket; Mishra, Saket V; Joshi, Asim; Sarkar, Debashmita; Hole, Arti; Mishra, Rohit; Dutt, Shilpee; Chilakapati, Murali K; Gupta, Sudeep; Dutt, Amit.
  • Desai S; Integrated Cancer Genomics Laboratory, Navi Mumbai, India.
  • Mishra SV; Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, India.
  • Joshi A; Shilpee Dutt Laboratory, Navi Mumbai, India.
  • Sarkar D; Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, India.
  • Hole A; Integrated Cancer Genomics Laboratory, Navi Mumbai, India.
  • Mishra R; Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, India.
  • Dutt S; Shilpee Dutt Laboratory, Navi Mumbai, India.
  • Chilakapati MK; Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, India.
  • Gupta S; Chilkapati Laboratory, Navi Mumbai, India.
  • Dutt A; Integrated Cancer Genomics Laboratory, Navi Mumbai, India.
J Biophotonics ; 13(10): e202000189, 2020 10.
Article in English | MEDLINE | ID: covidwho-627369
ABSTRACT
Several non-invasive Raman spectroscopy-based assays have been reported for rapid and sensitive detection of pathogens. We developed a novel statistical model for the detection of RNA viruses in saliva, based on an unbiased selection of a set of 65 Raman spectral features that mostly attribute to the RNA moieties, with a prediction accuracy of 91.6% (92.5% sensitivity and 88.8% specificity). Furthermore, to minimize variability and automate the downstream analysis of the Raman spectra, we developed a GUI-based analytical tool "RNA Virus Detector (RVD)." This conceptual framework to detect RNA viruses in saliva could form the basis for field application of Raman Spectroscopy in managing viral outbreaks, such as the ongoing COVID-19 pandemic. (http//www.actrec.gov.in/pi-webpages/AmitDutt/RVD/RVD.html).
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Full text: Available Collection: International databases Database: MEDLINE Main subject: RNA Viruses / Saliva / Spectrum Analysis, Raman Type of study: Diagnostic study / Prognostic study Limits: Humans Language: English Journal: J Biophotonics Journal subject: Biophysics Year: 2020 Document Type: Article Affiliation country: Jbio.202000189

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Full text: Available Collection: International databases Database: MEDLINE Main subject: RNA Viruses / Saliva / Spectrum Analysis, Raman Type of study: Diagnostic study / Prognostic study Limits: Humans Language: English Journal: J Biophotonics Journal subject: Biophysics Year: 2020 Document Type: Article Affiliation country: Jbio.202000189