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Development and validation of risk prediction models for COVID-19 positivity in a hospital setting.
Ng, Ming-Yen; Wan, Eric Yuk Fai; Wong, Ho Yuen Frank; Leung, Siu Ting; Lee, Jonan Chun Yin; Chin, Thomas Wing-Yan; Lo, Christine Shing Yen; Lui, Macy Mei-Sze; Chan, Edward Hung Tat; Fong, Ambrose Ho-Tung; Fung, Sau Yung; Ching, On Hang; Chiu, Keith Wan-Hang; Chung, Tom Wai Hin; Vardhanbhuti, Varut; Lam, Hiu Yin Sonia; To, Kelvin Kai Wang; Chiu, Jeffrey Long Fung; Lam, Tina Poy Wing; Khong, Pek Lan; Liu, Raymond Wai To; Chan, Johnny Wai Man; Wu, Alan Ka Lun; Lung, Kwok-Cheung; Hung, Ivan Fan Ngai; Lau, Chak Sing; Kuo, Michael D; Ip, Mary Sau-Man.
  • Ng MY; Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong Special Administrative Region; Department of Medical Imaging, The University of Hong Kong-Shenzhen Hospital, Shenzhen, Hong Kong Special Administrative Region. Electronic address: myng2@hku.hk.
  • Wan EYF; Department of Family Medicine and Primary Care, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Wong HYF; Department of Radiology, Queen Mary Hospital, Hong Kong Special Administrative Region.
  • Leung ST; Department of Radiology, Pamela Youde Nethersole Eastern Hospital, Hong Kong Special Administrative Region.
  • Lee JCY; Department of Radiology and Imaging, Queen Elizabeth Hospital, Hong Kong Special Administrative Region.
  • Chin TW; Department of Radiology and Imaging, Queen Elizabeth Hospital, Hong Kong Special Administrative Region.
  • Lo CSY; Department of Radiology, Queen Mary Hospital, Hong Kong Special Administrative Region.
  • Lui MM; Department of Medicine, Queen Mary Hospital, Hong Kong Special Administrative Region.
  • Chan EHT; Department of Medical Imaging, The University of Hong Kong-Shenzhen Hospital, Shenzhen, Hong Kong Special Administrative Region.
  • Fong AH; Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Fung SY; Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Ching OH; Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Chiu KW; Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Chung TWH; Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong Special Administrative Region.
  • Vardhanbhuti V; Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Lam HYS; Department of Radiology, Queen Mary Hospital, Hong Kong Special Administrative Region.
  • To KKW; Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong Special Administrative Region.
  • Chiu JLF; Department of Radiology and Imaging, Queen Elizabeth Hospital, Hong Kong Special Administrative Region.
  • Lam TPW; Department of Radiology, Queen Mary Hospital, Hong Kong Special Administrative Region.
  • Khong PL; Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Liu RWT; Department of Medicine, Ruttonjee Hospital, Hong Kong Special Administrative Region.
  • Chan JWM; Department of Medicine, Queen Elizabeth Hospital, Hong Kong Special Administrative Region.
  • Wu AKL; Department of Clinical Pathology, Pamela Youde Nethersole Eastern Hospital, Hong Kong Special Administrative Region.
  • Lung KC; Department of Medicine, Pamela Youde Nethersole Eastern Hospital, Hong Kong Special Administrative Region.
  • Hung IFN; Department of Medicine, Queen Mary Hospital, Hong Kong Special Administrative Region; Department of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Lau CS; Department of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Kuo MD; Medical Artificial Intelligence Laboratory (MAIL) Program, Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong Special Administrative Region.
  • Ip MS; Department of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region; Division of Respiratory & Critical Care Medicine, The University of Hong Kong-Shenzhen Hospital, Shenzhen, China.
Int J Infect Dis ; 101: 74-82, 2020 Dec.
Article in English | MEDLINE | ID: covidwho-758909
ABSTRACT

OBJECTIVES:

To develop (1) two validated risk prediction models for coronavirus disease-2019 (COVID-19) positivity using readily available parameters in a general hospital setting; (2) nomograms and probabilities to allow clinical utilisation.

METHODS:

Patients with and without COVID-19 were included from 4 Hong Kong hospitals. The database was randomly split into 21 for model development database (n = 895) and validation database (n = 435). Multivariable logistic regression was utilised for model creation and validated with the Hosmer-Lemeshow (H-L) test and calibration plot. Nomograms and probabilities set at 0.1, 0.2, 0.4 and 0.6 were calculated to determine sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV).

RESULTS:

A total of 1330 patients (mean age 58.2 ± 24.5 years; 50.7% males; 296 COVID-19 positive) were recruited. The first prediction model developed had age, total white blood cell count, chest x-ray appearances and contact history as significant predictors (AUC = 0.911 [CI = 0.880-0.941]). The second model developed has the same variables except contact history (AUC = 0.880 [CI = 0.844-0.916]). Both were externally validated on the H-L test (p = 0.781 and 0.155, respectively) and calibration plot. Models were converted to nomograms. Lower probabilities give higher sensitivity and NPV; higher probabilities give higher specificity and PPV.

CONCLUSION:

Two simple-to-use validated nomograms were developed with excellent AUCs based on readily available parameters and can be considered for clinical utilisation.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: SARS-CoV-2 / COVID-19 Type of study: Diagnostic study / Experimental Studies / Prognostic study / Randomized controlled trials Limits: Adult / Aged / Female / Humans / Male / Middle aged Language: English Journal: Int J Infect Dis Journal subject: Communicable Diseases Year: 2020 Document Type: Article

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Full text: Available Collection: International databases Database: MEDLINE Main subject: SARS-CoV-2 / COVID-19 Type of study: Diagnostic study / Experimental Studies / Prognostic study / Randomized controlled trials Limits: Adult / Aged / Female / Humans / Male / Middle aged Language: English Journal: Int J Infect Dis Journal subject: Communicable Diseases Year: 2020 Document Type: Article