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SARS-CoV-2 Epitopes Are Recognized by a Public and Diverse Repertoire of Human T Cell Receptors.
Shomuradova, Alina S; Vagida, Murad S; Sheetikov, Savely A; Zornikova, Ksenia V; Kiryukhin, Dmitry; Titov, Aleksei; Peshkova, Iuliia O; Khmelevskaya, Alexandra; Dianov, Dmitry V; Malasheva, Maria; Shmelev, Anton; Serdyuk, Yana; Bagaev, Dmitry V; Pivnyuk, Anastasia; Shcherbinin, Dmitrii S; Maleeva, Alexandra V; Shakirova, Naina T; Pilunov, Artem; Malko, Dmitry B; Khamaganova, Ekaterina G; Biderman, Bella; Ivanov, Alexander; Shugay, Mikhail; Efimov, Grigory A.
  • Shomuradova AS; National Research Center for Hematology, Moscow, Russia; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Vagida MS; National Research Center for Hematology, Moscow, Russia.
  • Sheetikov SA; National Research Center for Hematology, Moscow, Russia; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Zornikova KV; National Research Center for Hematology, Moscow, Russia; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Kiryukhin D; National Research Center for Hematology, Moscow, Russia.
  • Titov A; National Research Center for Hematology, Moscow, Russia.
  • Peshkova IO; National Research Center for Hematology, Moscow, Russia.
  • Khmelevskaya A; National Research Center for Hematology, Moscow, Russia; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Dianov DV; National Research Center for Hematology, Moscow, Russia; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Malasheva M; National Research Center for Hematology, Moscow, Russia; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Shmelev A; National Research Center for Hematology, Moscow, Russia.
  • Serdyuk Y; National Research Center for Hematology, Moscow, Russia.
  • Bagaev DV; Eindhoven University of Technology, Eindhoven, the Netherlands.
  • Pivnyuk A; Center of Life Sciences, Skolkovo Institute of Science and Technology, Moscow, Russia.
  • Shcherbinin DS; Pirogov Russian Medical State University, Moscow, Russia; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.
  • Maleeva AV; National Research Center for Hematology, Moscow, Russia.
  • Shakirova NT; National Research Center for Hematology, Moscow, Russia.
  • Pilunov A; National Research Center for Hematology, Moscow, Russia; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
  • Malko DB; National Research Center for Hematology, Moscow, Russia.
  • Khamaganova EG; National Research Center for Hematology, Moscow, Russia.
  • Biderman B; National Research Center for Hematology, Moscow, Russia.
  • Ivanov A; Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
  • Shugay M; Center of Life Sciences, Skolkovo Institute of Science and Technology, Moscow, Russia; Pirogov Russian Medical State University, Moscow, Russia; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia. Electronic address: mikhail.shugay@gmail.com.
  • Efimov GA; National Research Center for Hematology, Moscow, Russia. Electronic address: efimov.g@blood.ru.
Immunity ; 53(6): 1245-1257.e5, 2020 12 15.
Article in English | MEDLINE | ID: covidwho-922005
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ABSTRACT
Understanding the hallmarks of the immune response to SARS-CoV-2 is critical for fighting the COVID-19 pandemic. We assessed antibody and T cell reactivity in convalescent COVID-19 patients and healthy donors sampled both prior to and during the pandemic. Healthy donors examined during the pandemic exhibited increased numbers of SARS-CoV-2-specific T cells, but no humoral response. Their probable exposure to the virus resulted in either asymptomatic infection without antibody secretion or activation of preexisting immunity. In convalescent patients, we observed a public and diverse T cell response to SARS-CoV-2 epitopes, revealing T cell receptor (TCR) motifs with germline-encoded features. Bulk CD4+ and CD8+ T cell responses to the spike protein were mediated by groups of homologous TCRs, some of them shared across multiple donors. Overall, our results demonstrate that the T cell response to SARS-CoV-2, including the identified set of TCRs, can serve as a useful biomarker for surveying antiviral immunity.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: CD4-Positive T-Lymphocytes / CD8-Positive T-Lymphocytes / Epitopes, T-Lymphocyte / Spike Glycoprotein, Coronavirus / SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Observational study / Randomized controlled trials Limits: Adolescent / Adult / Female / Humans / Male / Middle aged / Young adult Language: English Journal: Immunity Journal subject: Allergy and Immunology Year: 2020 Document Type: Article Affiliation country: J.immuni.2020.11.004

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Full text: Available Collection: International databases Database: MEDLINE Main subject: CD4-Positive T-Lymphocytes / CD8-Positive T-Lymphocytes / Epitopes, T-Lymphocyte / Spike Glycoprotein, Coronavirus / SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Observational study / Randomized controlled trials Limits: Adolescent / Adult / Female / Humans / Male / Middle aged / Young adult Language: English Journal: Immunity Journal subject: Allergy and Immunology Year: 2020 Document Type: Article Affiliation country: J.immuni.2020.11.004