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1.
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
Int J Mol Sci
; 21(16)2020 Aug 08.
Artículo
en Inglés
| MEDLINE | ID: mdl-32784459
2.
Strain-level characterization of foodborne pathogens without culture enrichment for outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling.
Front Microbiol
; 15: 1330814, 2024.
Artículo
en Inglés
| MEDLINE | ID: mdl-38495515
3.
Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study.
Foods
; 11(21)2022 Oct 25.
Artículo
en Inglés
| MEDLINE | ID: mdl-36359961
4.
Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies.
Front Microbiol
; 12: 738284, 2021.
Artículo
en Inglés
| MEDLINE | ID: mdl-34803953
5.
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products.
Food Chem (Oxf)
; 2: 100023, 2021 Jul 30.
Artículo
en Inglés
| MEDLINE | ID: mdl-35415629
6.
Application of a strain-level shotgun metagenomics approach on food samples: resolution of the source of a Salmonella food-borne outbreak.
Microb Genom
; 7(4)2021 04.
Artículo
en Inglés
| MEDLINE | ID: mdl-33826490
7.
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
Microorganisms
; 8(8)2020 Aug 05.
Artículo
en Inglés
| MEDLINE | ID: mdl-32764329
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