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1.
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
J Clin Microbiol
; 62(5): e0157623, 2024 May 08.
Artículo
en Inglés
| MEDLINE | ID: mdl-38441926
2.
Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteria.
BMC Genomics
; 24(1): 438, 2023 Aug 04.
Artículo
en Inglés
| MEDLINE | ID: mdl-37537550
3.
Development of Digital Droplet PCR Targeting the Influenza H3N2 Oseltamivir-Resistant E119V Mutation and Its Performance through the Use of Reverse Genetics Mutants.
Curr Issues Mol Biol
; 45(3): 2521-2532, 2023 Mar 17.
Artículo
en Inglés
| MEDLINE | ID: mdl-36975535
4.
Noninvasive integrative approach applied to children in the context of recent air pollution exposure demonstrates association between fractional exhaled nitric oxide (FeNO) and urinary CC16.
Environ Res
; 216(Pt 1): 114441, 2023 01 01.
Artículo
en Inglés
| MEDLINE | ID: mdl-36191620
5.
Urinary CC16, a potential indicator of lung integrity and inflammation, increases in children after short-term exposure to PM2.5/PM10 and is driven by the CC16 38GG genotype.
Environ Res
; 212(Pt B): 113272, 2022 09.
Artículo
en Inglés
| MEDLINE | ID: mdl-35439460
6.
A systematic review and meta-analysis of host genetic factors associated with influenza severity.
BMC Genomics
; 22(1): 912, 2021 Dec 20.
Artículo
en Inglés
| MEDLINE | ID: mdl-34930124
7.
A Bioinformatics Whole-Genome Sequencing Workflow for Clinical Mycobacterium tuberculosis Complex Isolate Analysis, Validated Using a Reference Collection Extensively Characterized with Conventional Methods and In Silico Approaches.
J Clin Microbiol
; 59(6)2021 05 19.
Artículo
en Inglés
| MEDLINE | ID: mdl-33789960
8.
Large diversity of linezolid-resistant isolates discovered in food-producing animals through linezolid selective monitoring in Belgium in 2019.
J Antimicrob Chemother
; 77(1): 49-57, 2021 12 24.
Artículo
en Inglés
| MEDLINE | ID: mdl-34673924
9.
Evaluation of the added value of viral genomic information for predicting severity of influenza infection.
BMC Infect Dis
; 21(1): 785, 2021 Aug 10.
Artículo
en Inglés
| MEDLINE | ID: mdl-34376182
10.
First detection of a plasmid-encoded New-Delhi metallo-beta-lactamase-1 (NDM-1) producing Acinetobacter baumannii using whole genome sequencing, isolated in a clinical setting in Benin.
Ann Clin Microbiol Antimicrob
; 20(1): 5, 2021 Jan 06.
Artículo
en Inglés
| MEDLINE | ID: mdl-33407536
11.
A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay.
Food Microbiol
; 87: 103394, 2020 May.
Artículo
en Inglés
| MEDLINE | ID: mdl-31948635
12.
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
Int J Mol Sci
; 21(16)2020 Aug 08.
Artículo
en Inglés
| MEDLINE | ID: mdl-32784459
13.
Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection.
Int J Mol Sci
; 21(15)2020 Aug 04.
Artículo
en Inglés
| MEDLINE | ID: mdl-32759818
14.
The genetic structure of the Belgian population.
Hum Genomics
; 12(1): 6, 2018 02 02.
Artículo
en Inglés
| MEDLINE | ID: mdl-29394955
15.
Development and validation of an integrated DNA walking strategy to detect GMO expressing cry genes.
BMC Biotechnol
; 18(1): 40, 2018 06 27.
Artículo
en Inglés
| MEDLINE | ID: mdl-29945581
16.
A novel genotoxin-specific qPCR array based on the metabolically competent human HepaRG™ cell line as a rapid and reliable tool for improved in vitro hazard assessment.
Arch Toxicol
; 92(4): 1593-1608, 2018 Apr.
Artículo
en Inglés
| MEDLINE | ID: mdl-29411056
17.
A multiplex oligonucleotide ligation-PCR as a complementary tool for subtyping of Salmonella Typhimurium.
Appl Microbiol Biotechnol
; 99(19): 8137-49, 2015 Oct.
Artículo
en Inglés
| MEDLINE | ID: mdl-26205523
18.
Strain-level characterization of foodborne pathogens without culture enrichment for outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling.
Front Microbiol
; 15: 1330814, 2024.
Artículo
en Inglés
| MEDLINE | ID: mdl-38495515
19.
Pilot market surveillance of GMM contaminations in alpha-amylase food enzyme products: A detection strategy strengthened by a newly developed qPCR method targeting a GM Bacillus licheniformis producing alpha-amylase.
Food Chem (Oxf)
; 8: 100186, 2024 Jul 30.
Artículo
en Inglés
| MEDLINE | ID: mdl-38179151
20.
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes.
Front Microbiol
; 15: 1336532, 2024.
Artículo
en Inglés
| MEDLINE | ID: mdl-38659981