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1.
J Biomol Struct Dyn ; : 1-15, 2023 Sep 28.
Article in English | MEDLINE | ID: mdl-37768055

ABSTRACT

A series of arylcoumarin derivatives and two novel biscoumarin derivatives were investigated for their human recombinant glutathione S-transferase P1-1 (GSTP1-1) enzyme inhibitory activities for the first time. 4-(3,4-Dihydroxyphenyl)-6,7-dihydroxycoumarin (compound 24) was observed to be the most active coumarin derivative (IC50: 0.14 µM). The inhibition was found to be time-dependent and irreversible. Hypothetical binding modes of the ten most active compounds were calculated by molecular docking. Ligand efficiency indices (LEI) were estimated to better understand the binding performance of the coumarin derivatives. Extensive structure-activity relationship studies showed that hydroxy substitution on both the coumarin and the aryl ring enhanced the biological activity and the position of hydroxy group on the coumarin ring is critical for the binding pose and the activity. Top three ligands were subjected to molecular dynamics simulations and MM/PBSA for further investigation. Binding mode of compound 24 suggested that its high inhibitory activity might be attributed to its position between Tyr7 and the cofactor, glutathione (GS-DNB). Exhibiting favorable druglikeness profiles and pharmacokinetics based on ADME studies, compound 5 and 24 can be considered as potential drug leads in future studies for further development.Communicated by Ramaswamy H. Sarma.

2.
ACS Omega ; 7(27): 23332-23341, 2022 Jul 12.
Article in English | MEDLINE | ID: mdl-35847292

ABSTRACT

Pressure from environmental nongovernmental organizations and the public has accelerated research on the development of innovative and renewable polymers and additives. Recently, biobased "green" plasticizers that can be covalently attached to replace toxic and migratory phthalate-based plasticizers have gained a lot of attention from researchers. In this work, we prepared an azide-functionalized soybean oil derivative (AzSBO) and investigated whether it can be used as a plasticizer. We covalently attached AzSBO to an electron-deficient triple-bond-containing polyester via a metal-free azide-alkyne click reaction. The thermal, mechanical, and solvent absorption behaviors of different amounts of azidated oil-containing polyesters were determined. Moreover, the plasticization efficiency of AzSBO was compared with the commercial plasticizers bis(2-ethylhexyl) phthalate and epoxidized soybean oil. At relatively lower AzSBO ratios, the degree of cross-linking was higher and thus the plasticization was less pronounced but the solvent resistance was significantly improved. As the ratio of AzSBO was increased, the glass transition temperature of the pristine polymer decreased up to 31 °C from 57 °C. Furthermore, the incorporation of AzSBO also improved the thermal properties and 20% AzSBO addition led to a 60 °C increase in the maximum weight loss temperature.

3.
Colloids Surf B Biointerfaces ; 170: 122-128, 2018 Oct 01.
Article in English | MEDLINE | ID: mdl-29894832

ABSTRACT

The modification of magnetic nanoparticles (MNPs) via different routes for biomolecule binding is an attractive area of research. Waterborne thiol-ene suspension photopolymerization (TESP) can be a useful method for preparing functional MNPs. In this study, for the very first time waterborne TESP was performed in the presence of MNPs. Neat MNPs were coated and in situ functionalized with amine groups by using thiol-ene chemistry. Engrailed-2 (EN2) protein, a potential biomarker for various cancers such as prostate cancer, bladder cancer, breast cancer and ovarian cancer, is known to be a strong binder to a specific DNA sequence (50-TAATTA-30) to regulate transcription. Anti-EN2 antibodies were immobilized onto these MNPs by physical adsorption and covalent bonding methods, respectively. The amount of the physically immobilized antibodies (0.54 mg/g) were found to be lower than the loading of the covalently bonded antibodies (1.775 mg/g). The biomarker level in the artificial solutions prepared was determined by enzyme-linked immunosorbent assay. Coated MNPs were characterized by FTIR, TGA, SEM and STEM. After TESP, the average diameter of the neat magnetite nanoparticles increased from ∼15 nm to ∼32 nm.


Subject(s)
Amines/chemistry , Antibodies/chemistry , Magnetite Nanoparticles/chemistry , Sulfhydryl Compounds/chemistry , Antibodies/immunology , Homeodomain Proteins/immunology , Humans , Nerve Tissue Proteins/immunology , Particle Size , Photochemical Processes , Polymerization , Surface Properties , Water/chemistry
4.
Chem Biol Drug Des ; 91(1): 153-161, 2018 01.
Article in English | MEDLINE | ID: mdl-28667670

ABSTRACT

The ability of Archaea to adapt their membrane lipid compositions to extreme environments has brought in archaeosomes into consideration for the development of drug delivery systems overcoming the physical, biological blockades that the body exhibits against drug therapies. In this study, we prepared unilamellar archaeosomes, from the polar lipid fraction extracted from Haloarcula 2TK2 strain, and explored its potential as a drug delivery vehicle. Rifampicin and isoniazid which are conventional drugs in tuberculosis medication were loaded separately and together in the same archaeosome formulation for the benefits of the combined therapy. Particle size and zeta potential of archaeosomes were measured by photon correlation spectroscopy, and the morphology was assessed by with an atomic force microscope. Encapsulation efficiency and loading capacities of the drugs were determined, and in vitro drug releases were monitored spectrophotometrically. Our study demonstrates that rifampicin and isoniazid could be successfully loaded separately and together in archaeosomes with reasonable drug-loading and desired vesicle-specific characters. Both of the drugs had greater affinity for archaeosomes than a conventional liposome formulation. The results imply that archaeosomes prepared from extremely halophilic archaeon were compatible with the liposomes for the development of stable and sustained release of antituberculosis drugs.


Subject(s)
Archaea/metabolism , Isoniazid/chemistry , Rifampin/chemistry , Unilamellar Liposomes/chemistry , Calorimetry, Differential Scanning , Drug Liberation , Hydrogen-Ion Concentration , Isoniazid/metabolism , Microscopy, Atomic Force , Particle Size , Rifampin/metabolism
5.
Appl Biochem Biotechnol ; 181(3): 1030-1047, 2017 Mar.
Article in English | MEDLINE | ID: mdl-27704477

ABSTRACT

In this study, amine groups containing thiol-ene photocurable coating material for lipase immobilization were prepared. Lipase (EC 3.1.1.3) from Candida rugosa was immobilized onto the photocured coatings by physical adsorption and glutaraldehyde-activated covalent bonding methods, respectively. The catalytic efficiency of the immobilized and free enzymes was determined for the hydrolysis of p-nitrophenyl palmitate and also for the synthesis of p-nitrophenyl linoleate. The storage stability and the reusability of the immobilized enzyme and the effect of temperature and pH on the catalytic activities were also investigated. The optimum pH for free lipase and physically immobilized lipase was determined as 7.0, while it was found as 7.5 for the covalent immobilization. After immobilization, the optimum temperature increased from 37 °C (free lipase) to 50-55 °C. In the end of 15 repeated cycles, covalently bounded enzyme retained 60 and 70 % of its initial activities for hydrolytic and synthetic assays, respectively. While the physically bounded enzyme retained only 56 % of its hydrolytic activity and 67 % of its synthetic activity in the same cycle period. In the case of hydrolysis V max values slightly decreased after immobilization. For synthetic assay, the V max value for the covalently immobilized lipase was found as same as free lipase while it decreased dramatically for the physically immobilized lipase. Physically immobilized enzyme was found to be superior over covalent bonding in terms of enzyme loading capacity and optimum temperature and exhibited comparable re-use values and storage stability. Thus, a fast, easy, and less laborious method for lipase immobilization was developed.


Subject(s)
Candida/enzymology , Enzymes, Immobilized/chemistry , Fungal Proteins/chemistry , Lipase/chemistry , Enzyme Stability , Hot Temperature , Hydrogen-Ion Concentration , Photochemical Processes
6.
Extremophiles ; 19(2): 515-24, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25663452

ABSTRACT

Halophilic archaea offer a potential source for production of polyhydroxyalkanoates (PHAs). Hence, the experiments were carried out with five extremely halophilic archaeal isolates to determine the highest PHA-producing strain. PHA production of each isolates was separately examined in cheap carbon sources such as corn starch, sucrose, whey, apple, melon and tomato wastes. Corn starch was found to be a fairly effective substrate for PHA production. Among the strains studied here, the strain with the highest capability for PHA biosynthesis was found to be 1KYS1. Phylogenetic analysis based on 16S rRNA gene sequence comparison showed that 1KYS1 closely related to species of the genus Natrinema. The closest phylogenetic similarity was with the strain of Natrinema pallidum JCM 8980 (99 %). PHA content of 1KYS1 was about 53.14 % of the cell dry weight when starch was used as a carbon source. The formation of large and uniform PHA granules was confirmed by transmission electron microscopy and the biopolymer was identified as poly(3-hydroxybutyrate-co-hydroxyvalerate) (PHBV). PHBV produced by 1KYS1 was blended with low molar mass polyethylene glycol (PEG 300) to prepare biocompatible films for drug delivery. Rifampicin was used as a model drug and its release from PHBV films was investigated at pH 7.4, 37 °C. It was found that PHBV films obtained from 1KYS1 were very effective for drug delivery. In conclusion, PHBV of 1KYS1 may have a potential usage in drug delivery applications.


Subject(s)
Archaea/metabolism , Polyesters/metabolism , Archaea/genetics , Archaea/ultrastructure , Starch/metabolism
7.
J Microbiol Biotechnol ; 23(2): 205-10, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23412063

ABSTRACT

Thiol-ene polymerization is a versatile tool for several applications. Here we report the preparation of epoxide groups containing thiol-ene photocurable polymeric support and the covalent immobilization of alpha-amylase onto these polymeric materials. The morphology of the polymeric support was characterized by scanning electron microscopy (SEM), and energy dispersive spectroscopy (EDS) coupled with SEM was used to explore the chemical composition. The polymeric support and the immobilization of the enzyme were characterized by FTIR analysis. SEM-EDS and FTIR results showed that the enzyme was successfully covalently attached to the polymeric support. The immobilization efficiency and enzyme activity of alpha-amylase were examined at various pH (5.0-8.0) and temperature (30-80 degrees C) values. The storage stability and reusability of immobilized alpha-amylase were investigated. The immobilization yield was 276 +/- 1.6 mg per gram of polymeric support. Enzyme assays demonstrated that the immobilized enzyme exhibited better thermostability than the free one. The storage stability and reusability were improved by the immobilization on this enzyme support. Free enzyme lost its activity completely within 15 days. On the other hand, the immobilized enzyme retained 86.7% of its activity after 30 days. These results confirm that alpha-amylase was successfully immobilized and gained a more stable character compared with the free one.


Subject(s)
Biotechnology/methods , Enzymes, Immobilized/metabolism , Epoxy Compounds/metabolism , Polymers/metabolism , Sulfhydryl Compounds/metabolism , alpha-Amylases/metabolism , Enzyme Stability , Enzymes, Immobilized/chemistry , Microscopy, Electron, Scanning , Protein Binding , Spectroscopy, Fourier Transform Infrared , Temperature , Time Factors , alpha-Amylases/chemistry
8.
J Biomater Sci Polym Ed ; 23(7): 887-99, 2012.
Article in English | MEDLINE | ID: mdl-21457618

ABSTRACT

In this study, electrospinning was combined with UV curing technology for producing in situ photo cross-linked fibers from methacrylated cellulose acetate butyrate (CABIEM). ECV304 and 3T3 cells were seeded on electrospun fibrous scaffolds. Collagen modified CABIEM fibers were also prepared for improving cell adhesion and proliferation. Cross-linking and the morphology of the fibers were characterized by ATR-FTIR spectrometry and environmental scanning electron microscopy (ESEM). The cytotoxicity of the fibers was examined using the MTT cytotoxicity assay. According to the results, electrospun fibrous scaffolds are non-toxic and cell viability depends on the amount of collagen. It was found that cell adhesion and cell growth were enhanced as the collagen percentage was increased.


Subject(s)
Cell Survival , Cellulose/analogs & derivatives , Tissue Engineering/methods , Tissue Scaffolds , 3T3 Cells , Animals , Cell Adhesion , Cell Line , Cell Movement , Cellulose/chemistry , Cellulose/radiation effects , Endothelial Cells/physiology , Humans , Materials Testing , Methacrylates/chemistry , Mice , Microscopy, Electron, Scanning , Polyethylene Glycols/chemistry , Spectroscopy, Fourier Transform Infrared , Tissue Scaffolds/chemistry , Ultraviolet Rays
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