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1.
Int J Phytoremediation ; 24(13): 1385-1394, 2022.
Article in English | MEDLINE | ID: mdl-35166609

ABSTRACT

The dreaded weed ipomea (Ipomea carnea), has shown promise as a versatile phytoremediator. But I. carnea plants exude several alkaloids and phenols which are harmful to plants as well as animals. Due to this, the weed imparts as much or more toxicity to the soil as it remediates. These authors have earlier found that upon being vermicomposted by Eisenia fetida ipomea loses its toxicity and becomes a benign organic fertilizer with pest repellant attributes. These findings open up the possibility of using earthworms in those segments of land which are sought to be phytoremediated by ipomea so that the earthworms can keep converting the dead ipomea plants and the debris of live plants to fertilizer. The present work has aimed to determine whether the extent and nature of earthworm impact differs from species to species or is similar across different species. It has revealed that the action of each of the four different earthworm species deployed by the authors caused the C:N ratio of ipomea to change drastically ̶ from 28.20 to 15.95 ± 0.75, bringing the vermicomposts to the category of fertilizers fit for horticulture. The Fourier transform infrared (FTIR) spectra revealed that all the species caused a breakdown of the alkaloids and the phenolic compounds present in ipomea, resulting in the weed's detoxification. The earthworms also effected partial degradation of the lignocellulosic content of ipomea to simpler and more soil-friendly constituents like humic acids. Thermogravimetry, differential scanning calorimetry and scanning electron microscopy corroborated these findings. The influence exerted by the four species of earthworms was similarly beneficial in nature and extent.


First-ever study which establishes the general applicability of earthworms in nullifying the toxic impacts caused by ipomea during its use in phytoremediation, thereby greatly enhancing ipomea's value as a phytoremediator. The studies also provide an avenue for the utilization of the otherwise worthless ipomea harvested after phytoremediation or from natural stands.


Subject(s)
Ipomoea , Oligochaeta , Animals , Fertilizers , Humic Substances , Biodegradation, Environmental , Soil/chemistry
2.
Future Microbiol ; 13: 1225-1246, 2018 09.
Article in English | MEDLINE | ID: mdl-29938540

ABSTRACT

AIM: A DNA microarray-based assay for the detection of antimicrobial resistance (AMR) genes was used to study carbapenemase-producing organisms at the Kidney Center of Rawalpindi, Pakistan. METHODS: The evaluation of this assay was performed using 97 reference strains with confirmed AMR genes. Testing of 7857 clinical samples identified 425 Gram-negative bacteria out of which 82 appeared carbapenem resistant. These isolates were analyzed using VITEK-2 for phenotyping and the described AMR assay for genotyping. RESULTS: The most prevalent carbapenemase gene was blaNDM and in 12 isolates we detected two carbapenemase genes (e.g., blaNDM/blaOXA-48). CONCLUSION: Our prevalence data from Pakistan show that - as in other parts of the world - carbapenemase-producing organisms with different underlying resistance mechanisms are emerging, and this warrants intensified and constant surveillance.


Subject(s)
Bacterial Proteins/genetics , Drug Resistance, Bacterial/genetics , Gram-Negative Bacteria/genetics , Gram-Negative Bacteria/isolation & purification , Oligonucleotide Array Sequence Analysis , beta-Lactamases/genetics , DNA, Bacterial/genetics , Genotype , Gram-Negative Bacteria/enzymology , Humans , Kidney Transplantation , Microbial Sensitivity Tests , Pakistan , Phenotype , Tertiary Care Centers
3.
Front Microbiol ; 7: 330, 2016.
Article in English | MEDLINE | ID: mdl-27047457

ABSTRACT

Frequent incidents of antibiotic-resistant biofilm forming pathogens in community-associated and hospital-acquired infections have become a global concern owing to failure of conventional therapies. Nano-antibiotics (NABs) are de novo tools to overcome the multi-drug resistant mechanisms employed by the superbugs. Inhibition of biofilm formation is one of those strategies to curb multi drug resistance phenomenon. In the current study, the anti-biofilm and antibacterial potential of newly synthesized cefotaxime loaded chitosan based NABs have been investigated. Both bare and cefotaxime loaded NABs were prepared by ionotropic gelation method. They were found carrying positive zeta potential of more than +50 mV, indicating highly stable nano-dispersion. Moreover, microscopic studies revealed their size as less than 100 nm. NABs were tested against clinical isolates of multi drug resistant Klebsiella pneumoniae, Pseudomonas aeruginosa, Escherichia coli, and methicillin resistant Staphylococcus aureus and wherein they demonstrated broad-spectrum anti-biofilm and anti-pathogenic activity. Thus, in vitro synergistic action of cephalosporin drugs and chitosan polymer at nano-scale in contrast to free antibiotics can be an improved broad-spectrum strategy to thwart resistance mechanisms in both Gram-positive and Gram-negative resistant pathogens.

4.
Antimicrob Agents Chemother ; 58(9): 5589-93, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24982081

ABSTRACT

The molecular epidemiology of 66 NDM-producing isolates from 2 Pakistani hospitals was investigated, with their genetic relatedness determined using repetitive sequence-based PCR (Rep-PCR). PCR-based replicon typing and screening for antibiotic resistance genes encoding carbapenemases, other ß-lactamases, and 16S methylases were also performed. Rep-PCR suggested a clonal spread of Enterobacter cloacae and Escherichia coli. A number of plasmid replicon types were identified, with the incompatibility A/C group (IncA/C) being the most common (78%). 16S methylase-encoding genes were coharbored in 81% of NDM-producing Enterobacteriaceae.


Subject(s)
Acinetobacter baumannii/genetics , Bacterial Proteins/genetics , Enterobacteriaceae/genetics , Methyltransferases/genetics , beta-Lactamases/genetics , Acinetobacter baumannii/isolation & purification , Acinetobacter baumannii/metabolism , Amdinocillin/pharmacology , Anti-Bacterial Agents/pharmacology , Carbapenems/pharmacology , Cross Infection/epidemiology , DNA, Bacterial/genetics , Doripenem , Enterobacteriaceae/isolation & purification , Enterobacteriaceae/metabolism , Fosfomycin/pharmacology , Humans , Meropenem , Microbial Sensitivity Tests , Molecular Epidemiology , Multilocus Sequence Typing , Pakistan , Thienamycins/pharmacology , beta-Lactamases/biosynthesis
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