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1.
Nat Commun ; 14(1): 7404, 2023 11 16.
Article in English | MEDLINE | ID: mdl-37973878

ABSTRACT

Understanding how tropical systems have responded to large-scale climate change, such as glacial-interglacial oscillations, and how human impacts have altered those responses is key to current and future ecology. A sedimentary record recovered from Lake Junín, in the Peruvian Andes (4085 m elevation) spans the last 670,000 years and represents the longest continuous and empirically-dated record of tropical vegetation change to date. Spanning seven glacial-interglacial oscillations, fossil pollen and charcoal recovered from the core showed the general dominance of grasslands, although during the warmest times some Andean forest trees grew above their modern limits near the lake. Fire was very rare until the last 12,000 years, when humans were in the landscape. Here we show that, due to human activity, our present interglacial, the Holocene, has a distinctive vegetation composition and ecological trajectory compared with six previous interglacials. Our data reinforce the view that modern vegetation assemblages of high Andean grasslands and the presence of a defined tree line are aspects of a human-modified landscape.


Subject(s)
Forests , Trees , Humans , Trees/physiology , Pollen , Fossils , Climate Change , Ecosystem
2.
Nature ; 607(7918): 301-306, 2022 07.
Article in English | MEDLINE | ID: mdl-35831604

ABSTRACT

Our understanding of the climatic teleconnections that drove ice-age cycles has been limited by a paucity of well-dated tropical records of glaciation that span several glacial-interglacial intervals. Glacial deposits offer discrete snapshots of glacier extent but cannot provide the continuous records required for detailed interhemispheric comparisons. By contrast, lakes located within glaciated catchments can provide continuous archives of upstream glacial activity, but few such records extend beyond the last glacial cycle. Here a piston core from Lake Junín in the uppermost Amazon basin provides the first, to our knowledge, continuous, independently dated archive of tropical glaciation spanning 700,000 years. We find that tropical glaciers tracked changes in global ice volume and followed a clear approximately 100,000-year periodicity. An enhancement in the extent of tropical Andean glaciers relative to global ice volume occurred between 200,000 and 400,000 years ago, during sustained intervals of regionally elevated hydrologic balance that modified the regular approximately 23,000-year pacing of monsoon-driven precipitation. Millennial-scale variations in the extent of tropical Andean glaciers during the last glacial cycle were driven by variations in regional monsoon strength that were linked to temperature perturbations in Greenland ice cores1; these interhemispheric connections may have existed during previous glacial cycles.

3.
Proc Natl Acad Sci U S A ; 103(24): 8937-42, 2006 Jun 13.
Article in English | MEDLINE | ID: mdl-16740660

ABSTRACT

The underlying causes of late-Holocene climate variability in the tropics are incompletely understood. Here we report a 1,500-year reconstruction of climate history and glaciation in the Venezuelan Andes using lake sediments. Four glacial advances occurred between anno Domini (A.D.) 1250 and 1810, coincident with solar-activity minima. Temperature declines of -3.2 +/- 1.4 degrees C and precipitation increases of approximately 20% are required to produce the observed glacial responses. These results highlight the sensitivity of high-altitude tropical regions to relatively small changes in radiative forcing, implying even greater probable responses to future anthropogenic forcing.


Subject(s)
Climate , Sunlight , Temperature , Tropical Climate , Geologic Sediments , Ice Cover , Models, Theoretical , Venezuela
6.
FEBS Lett ; 506(1): 51-4, 2001 Sep 28.
Article in English | MEDLINE | ID: mdl-11591369

ABSTRACT

We have investigated the binding of bepridil to calcium-saturated cardiac troponin C in a cardiac troponin C/troponin I complex. Nuclear magnetic resonance spectroscopy and [(15)N,(2)H]cardiac troponin C permitted the mapping of bepridil-induced amide proton chemical shifts. A single bepridil-binding site in the regulatory domain was found with an affinity constant of approximately 140 microM(-1). In the presence of cardiac troponin I, bepridil binding to the C domain of cardiac troponin C was not detected. The pattern of bepridil-induced chemical shifts is consistent with stabilization of more open regulatory domain conformational states. A similar pattern of chemical shift perturbations was observed for interaction of the troponin I cardiac-specific amino-terminus with the cardiac troponin C regulatory domain. These results suggest that both bepridil and the cardiac-specific amino-terminus may mediate an increase in calcium affinity by interacting with and stabilizing open regulatory domain conformations. Chemical shift mapping suggests a possible role for inactive calcium-binding site I in the modulation of calcium affinity.


Subject(s)
Bepridil/metabolism , Myocardium/metabolism , Troponin C/metabolism , Troponin I/metabolism , Calcium/metabolism , Nuclear Magnetic Resonance, Biomolecular , Protein Binding , Protein Conformation , Troponin C/chemistry , Troponin I/chemistry
7.
Pediatrics ; 108(1): E2, 2001 Jul.
Article in English | MEDLINE | ID: mdl-11433081

ABSTRACT

OBJECTIVE: To describe types of injuries, mechanisms of injury, and treatment of injuries caused by scooter use in children, and to discuss issues of injury prevention in children who use scooters. STUDY DESIGN: Data were collected from 14 children seen by a general pediatrician and an orthopedic surgeon over a 3-month period in the summer of 2000. Detailed histories were obtained from patients and their families, and medical records were reviewed. RESULTS: Eleven of the 14 patients suffered fractures. The injuries in the other 3 patients were a large abrasion, a laceration, and a septic knee. Half (7) of the children were injured within the first day of riding their scooter, and 13 of the 14 injuries occurred within the first month of scooter use. Only 5 patients used protective gear at the time of their injuries, and those patients were injured in unprotected parts of their bodies. CONCLUSIONS: The popularity of scooters presents a new cause of pediatric injuries and a significant health hazard to children. In our study, most injuries occurred shortly after children began scooter use, and younger children suffered the most severe injuries. Additional studies are needed to determine how scooter-related injuries can be prevented or minimized. scooters, injuries.


Subject(s)
Fractures, Bone/etiology , Lacerations/etiology , Play and Playthings , Adolescent , California , Child , Child, Preschool , Female , Fractures, Bone/prevention & control , Fractures, Bone/surgery , Humans , Lacerations/prevention & control , Lacerations/surgery , Male , Protective Devices , Skin/injuries
8.
Biochemistry ; 40(20): 5992-6001, 2001 May 22.
Article in English | MEDLINE | ID: mdl-11352734

ABSTRACT

Multidimensional heteronuclear magnetic resonance studies of the cardiac troponin C/troponin I(1-80)/troponin I(129-166) complex demonstrated that cardiac troponin I(129-166), corresponding to the adjacent inhibitory and regulatory regions, interacts with and induces an opening of the cardiac troponin C regulatory domain. Chemical shift perturbation mapping and (15)N transverse relaxation rates for intact cardiac troponin C bound to either cardiac troponin I(1-80)/troponin I(129-166) or troponin I(1-167) suggested that troponin I residues 81-128 do not interact strongly with troponin C but likely serve to modulate the interaction of troponin I(129-166) with the cardiac troponin C regulatory domain. Chemical shift perturbations due to troponin I(129-166) binding the cardiac troponin C/troponin I(1-80) complex correlate with partial opening of the cardiac troponin C regulatory domain previously demonstrated by distance measurements using fluorescence methodologies. Fluorescence emission from cardiac troponin C(F20W/N51C)(AEDANS) complexed to cardiac troponin I(1-80) was used to monitor binding of cardiac troponin I(129-166) to the regulatory domain of cardiac troponin C. The apparent K(d) for cardiac troponin I(129-166) binding to cardiac troponin C/troponin I(1-80) was 43.3 +/- 3.2 microM. After bisphosphorylation of cardiac troponin I(1-80) the apparent K(d) increased to 59.1 +/- 1.3 microM. Thus, phosphorylation of the cardiac-specific N-terminus of troponin I reduces the apparent binding affinity of the regulatory domain of cardiac troponin C for cardiac troponin I(129-166) and provides further evidence for beta-adrenergic modulation of troponin Ca(2+) sensitivity through a direct interaction between the cardiac-specific amino-terminus of troponin I and the cardiac troponin C regulatory domain.


Subject(s)
Myocardium/metabolism , Peptide Fragments/chemistry , Troponin C/metabolism , Troponin I/chemistry , Troponin I/metabolism , Amino Acid Sequence , Energy Transfer , Molecular Sequence Data , Muscle Contraction/physiology , Nitrogen Isotopes , Nuclear Magnetic Resonance, Biomolecular/methods , Peptide Fragments/metabolism , Phosphorylation , Protein Binding , Protein Conformation , Protein Structure, Tertiary , Protons , Spectrometry, Fluorescence , Thermodynamics , Troponin C/chemistry
10.
J Biol Chem ; 276(12): 9337-43, 2001 Mar 23.
Article in English | MEDLINE | ID: mdl-11113122

ABSTRACT

Levosimendan is an inodilatory drug that mediates its cardiac effect by the calcium sensitization of contractile proteins. The target protein of levosimendan is cardiac troponin C (cTnC). In the current work, we have studied the interaction of levosimendan with Ca(2+)-saturated cTnC by heteronuclear NMR and small angle x-ray scattering. A specific interaction between levosimendan and the Ca(2+)-loaded regulatory domain of recombinant cTnC(C35S) was observed. The changes in the NMR spectra of the N-domain of full-length cTnC(C35S), due to the binding of levosimendan to the primary site, were indicative of a slow conformational exchange. In contrast, no binding of levosimendan to the regulatory domain of cTnC(A-Cys), where all the cysteine residues are mutated to serine, was detected. Moreover, it was shown that levosimendan was in fast exchange on the NMR time scale with a secondary binding site in the C-domain of both cTnC(C35S) and cTnC(A-Cys). The small angle x-ray scattering experiments confirm the binding of levosimendan to Ca(2+)-saturated cTnC but show no domain-domain closure. The experiments were run in the absence of the reducing agent dithiothreitol and the preservative sodium azide (NaN(3)), since we found that levosimendan reacts with these chemicals, commonly used for preparation of NMR protein samples.


Subject(s)
Calcium/metabolism , Hydrazones/metabolism , Myocardium/metabolism , Pyridazines/metabolism , Troponin C/metabolism , Magnetic Resonance Spectroscopy , Protein Binding , Simendan , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
11.
J Biol Chem ; 275(27): 20610-7, 2000 Jul 07.
Article in English | MEDLINE | ID: mdl-10801883

ABSTRACT

Previously, we utilized (15)N transverse relaxation rates to demonstrate significant mobility in the linker region and conformational exchange in the regulatory domain of Ca(2+)-saturated cardiac troponin C bound to the isolated N-domain of cardiac troponin I (Gaponenko, V., Abusamhadneh, E., Abbott, M. B., Finley, N., Gasmi-Seabrook, G., Solaro, R.J., Rance, M., and Rosevear, P.R. (1999) J. Biol. Chem. 274, 16681-16684). Here we show a large decrease in cardiac troponin C linker flexibility, corresponding to residues 85-93, when bound to intact cardiac troponin I. The addition of 2 m urea to the intact cardiac troponin I-troponin C complex significantly increased linker flexibility. Conformational changes in the regulatory domain of cardiac troponin C were monitored in complexes with troponin I-(1-211), troponin I-(33-211), troponin I-(1-80) and bisphosphorylated troponin I-(1-80). The cardiac specific N terminus, residues 1-32, and the C-domain, residues 81-211, of troponin I are both capable of inducing conformational changes in the troponin C regulatory domain. Phosphorylation of the cardiac specific N terminus reversed its effects on the regulatory domain. These studies provide the first evidence that the cardiac specific N terminus can modulate the function of troponin C by altering the conformational equilibrium of the regulatory domain.


Subject(s)
Myocardium/metabolism , Troponin C/chemistry , Troponin I/metabolism , Animals , Calcium/metabolism , Fluorescence , Macromolecular Substances , Magnetic Resonance Spectroscopy , Naphthalenesulfonates , Phosphorylation , Protein Binding , Protein Conformation , Urea/pharmacology
12.
FEBS Lett ; 469(2-3): 168-72, 2000 Mar 10.
Article in English | MEDLINE | ID: mdl-10713265

ABSTRACT

Cardiac troponin I(129-149) binds to the calcium saturated cardiac troponin C/troponin I(1-80) complex at two distinct sites. Binding of the first equivalent of troponin I(129-149) was found to primarily affect amide proton chemical shifts in the regulatory domain, while the second equivalent perturbed amide proton chemical shifts within the D/E linker region. Nitrogen-15 transverse relaxation rates showed that binding the first equivalent of inhibitory peptide to the regulatory domain decreased conformational exchange in defunct calcium binding site I and that addition of the second equivalent of inhibitory peptide decreased flexibility in the D/E linker region. No interactions between the inhibitory peptide and the C-domain of cardiac troponin C were detected by these methods demonstrating that the inhibitory peptide cannot displace cTnI(1-80) from the C-domain.


Subject(s)
Myocardium/chemistry , Peptide Fragments/chemistry , Troponin C/chemistry , Troponin I/chemistry , Amino Acid Sequence , Animals , Binding Sites , Calcium/chemistry , Calcium/metabolism , Magnetic Resonance Spectroscopy , Mice , Models, Biological , Molecular Sequence Data , Peptide Fragments/metabolism , Peptide Mapping , Protein Conformation , Protein Structure, Tertiary , Troponin C/metabolism , Troponin I/metabolism
13.
FEBS Lett ; 453(1-2): 107-12, 1999 Jun 18.
Article in English | MEDLINE | ID: mdl-10403385

ABSTRACT

Phosphorylation of the cardiac specific amino-terminus of troponin I has been demonstrated to reduce the Ca2+ affinity of the cardiac troponin C regulatory site. Recombinant N-terminal cardiac troponin I proteins, cardiac troponin I(33-80), cardiac troponin I(1-80), cardiac troponin I(1-80)DD and cardiac troponin I(1-80)pp, phosphorylated by protein kinase A, were used to form stable binary complexes with recombinant cardiac troponin C. Cardiac troponin I(1-80)DD, having phosphorylated Ser residues mutated to Asp, provided a stable mimetic of the phosphorylated state. In all complexes, the N-terminal domain of cardiac troponin I primarily makes contact with the C-terminal domain of cardiac troponin C. The nonphosphorylated cardiac specific amino-terminus, cardiac troponin I(1-80), was found to make additional interactions with the N-terminal domain of cardiac troponin C.


Subject(s)
Myocardium/chemistry , Phosphoproteins/chemistry , Troponin C/chemistry , Troponin I/chemistry , Amino Acid Sequence , Molecular Sequence Data , Nuclear Magnetic Resonance, Biomolecular , Phosphoproteins/metabolism , Phosphorylation , Protein Binding , Protein Structure, Secondary , Troponin C/metabolism , Troponin I/metabolism
14.
J Biol Chem ; 274(24): 16681-4, 1999 Jun 11.
Article in English | MEDLINE | ID: mdl-10358006

ABSTRACT

Conformational exchange has been demonstrated within the regulatory domain of calcium-saturated cardiac troponin C when bound to the NH2-terminal domain of cardiac troponin I-(1-80), and cardiac troponin I-(1-80)DD, having serine residues 23 and 24 mutated to aspartate to mimic the phosphorylated form of the protein. Binding of cardiac troponin I-(1-80) decreases conformational exchange for residues 29, 32, and 34. Comparison of average transverse cross correlation rates show that both the NH2- and COOH-terminal domains of cardiac troponin C tumble with similar correlation times when bound to cardiac troponin I-(1-80). In contrast, the NH2- and COOH-terminal domains in free cardiac troponin C and cardiac troponin C bound cardiac troponin I-(1-80)DD tumble independently. These results suggest that the nonphosphorylated cardiac specific NH2 terminus of cardiac troponin I interacts with the NH2-terminal domain of cardiac troponin C.


Subject(s)
Myocardium , Troponin C/metabolism , Troponin I/metabolism , Aspartic Acid/genetics , Computer Simulation , Mutation , Nuclear Magnetic Resonance, Biomolecular , Phosphorylation , Protein Binding , Protein Conformation , Serine/genetics , Solutions , Troponin C/chemistry
15.
West J Med ; 166(5): 337, 1997 May.
Article in English | MEDLINE | ID: mdl-18751076
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