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1.
Acta Crystallogr F Struct Biol Commun ; 72(Pt 5): 386-96, 2016 05.
Article in English | MEDLINE | ID: mdl-27139831

ABSTRACT

The stationary-phase survival protein SurE from Brucella abortus (BaSurE) is a metal-dependent phosphatase that is essential for the survival of this bacterium in the stationary phase of its life cycle. Here, BaSurE has been biochemically characterized and its crystal structure has been determined to a resolution of 1.9 Å. BaSurE was found to be a robust enzyme, showing activity over wide ranges of temperature and pH and with various phosphoester substrates. The active biomolecule is a tetramer and each monomer was found to consist of two domains: an N-terminal domain, which forms an approximate α + ß fold, and a C-terminal domain that belongs to the α/ß class. The active site lies at the junction of these two domains and was identified by the presence of conserved negatively charged residues and a bound Mg(2+) ion. Comparisons of BaSurE with its homologues have revealed both common features and differences in this class of enzymes. The number and arrangement of some of the equivalent secondary structures, which are seen to differ between BaSurE and its homologues, are responsible for a difference in the size of the active-site area and the overall oligomeric state of this enzyme in other organisms. As it is absent in mammals, it has the potential to be a drug target.


Subject(s)
Bacterial Proteins/chemistry , Brucella abortus/chemistry , Virulence , Brucella abortus/pathogenicity , Crystallization , Hydrogen-Ion Concentration , Protein Conformation , Substrate Specificity , Temperature
2.
Acta Crystallogr F Struct Biol Commun ; 72(Pt 4): 338, 2016 Apr.
Article in English | MEDLINE | ID: mdl-27050270

ABSTRACT

A response is published to a Letter to the Editor by Maize [(2016), Acta Cryst. F72, 336-337].


Subject(s)
Crystallography, X-Ray , Helicobacter pylori , Crystallization
3.
Acta Crystallogr F Struct Biol Commun ; 72(Pt 1): 42-8, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26750483

ABSTRACT

Proteins belonging to the histidine triad (HIT) superfamily bind nucleotides and use the histidine triad motif to carry out dinucleotidyl hydrolase, nucleotidyltransferase and phosphoramidite hydrolase activities. Five different branches of this superfamily are known to exist. Defects in these proteins in humans are linked to many diseases such as ataxia, diseases of RNA metabolism and cell-cycle regulation, and various types of cancer. The histidine triad nucleotide protein (HINT) is nearly identical to proteins that have been classified as protein kinase C-interacting proteins (PKCIs), which also have the ability to bind and inhibit protein kinase C. The structure of HINT, which exists as a homodimer, is highly conserved from humans to bacteria and shares homology with the product of fragile histidine triad protein (FHit), a tumour suppressor gene of this superfamily. Here, the structure of HINT from Helicobacter pylori (HpHINT) in complex with AMP is reported at a resolution of 3 Å. The final model has R and Rfree values of 26 and 28%, respectively, with good electron density. Structural comparison with previously reported homologues and phylogenetic analysis shows H. pylori HINT to be the smallest among them, and suggests that it branched out separately during the course of evolution. Overall, this structure has contributed to a better understanding of this protein across the animal kingdom.


Subject(s)
Acid Anhydride Hydrolases/chemistry , Bacterial Proteins/chemistry , Helicobacter pylori/enzymology , Adenosine Monophosphate/chemistry , Catalytic Domain , Crystallography, X-Ray , Hydrogen Bonding , Hydrophobic and Hydrophilic Interactions , Models, Molecular , Protein Binding , Protein Conformation, alpha-Helical , Structural Homology, Protein
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