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1.
Clin J Gastroenterol ; 14(4): 1020-1026, 2021 Aug.
Article in English | MEDLINE | ID: mdl-33844129

ABSTRACT

Worldwide, 5-10% of soft tissue sarcoma cases in adults have been attributed to synovial sarcoma. It is often reported to occur near the joints of the arm, neck, and leg but rarely in the gastrointestinal tract. In this study, we report a case of synovial sarcoma arising in the stomach of a 59-year-old woman. Gastrointestinal endoscopy revealed an ulcerative and hemorrhagic tumor with marginal elevation in the fundus. Histological study showed that the tumor was composed of tightly packed spindle cells in bundles, and one of its component demonstrated significant mitotic activity (> 40/10 high-power fields) in several areas. The diagnosis was confirmed by the evidence of SS18 gene rearrangement, according to immunohistochemistry study, (including a novel SS18-SSX fusion-specific antibody), fluorescent in situ hybridization, and the identification of the SS18-SSX1 and SS18-SSX1/2/4 fusion transcripts using reverse-transcript polymerase chain reaction. No evidence of local recurrence or distant metastasis has been found in the more than 5 years since. Distinguishing synovial sarcoma in the digestive tract from other mesenchymal neoplasms, such as gastrointestinal stromal tumor, may be difficult, especially when spindle-shaped cell proliferation is predominant, as in our patient. Therefore, morphological, immunohistological, and molecular evaluations are important for a comprehensive diagnosis.


Subject(s)
Sarcoma, Synovial , Adult , Biomarkers, Tumor , Female , Humans , In Situ Hybridization, Fluorescence , Middle Aged , Neoplasm Recurrence, Local , Oncogene Proteins, Fusion/genetics , Sarcoma, Synovial/diagnosis , Sarcoma, Synovial/genetics , Stomach
2.
Appl Microbiol Biotechnol ; 103(15): 6297-6308, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31165226

ABSTRACT

The oleaginous yeast Lipomyces starkeyi is an attractive organism for the industrial production of lipids; however, the amount of lipid produced by wild-type L. starkeyi is insufficient. The study aims to obtain L. starkeyi mutants that rapidly accumulate large amounts of triacylglycerol (TAG). Mutagenized yeast cells at the early stages of cultivation were subjected to Percoll density gradient centrifugation; cells with increased production of TAG were expected to be enriched in the resultant upper fraction because of their lower density. Among 120 candidates from the upper fractions, five mutants were isolated that accumulated higher amounts of TAG. Moreover, when omitting cells with mucoid colony morphology, 11 objective mutants from 11 candidates from the upper fraction were effectively (100%) isolated. Of total 16 mutants obtained, detailed characterization of five mutants was performed to reveal that five mutants achieved about 1.5-2.0 times TAG concentration (4.7-6.0 g/L) as compared with the wild-type strain (3.6 g/L) at day 5. Among these five mutants, strain E15 was the best for industrial use because only strain E15 showed significantly higher TAG concentration as well as significantly higher degree of lipid to glucose and biomass to glucose yields than the wild-type strain. Thus, Percoll density gradient centrifugation is an effective method to isolate mutant cells that rapidly accumulate large amounts of TAG. It is expected that by repeating this procedure as part of a yeast-breeding program, L. starkeyi mutants suitable for industrial lipid production can be easily and effectively obtained.


Subject(s)
Lipomyces/genetics , Lipomyces/metabolism , Metabolic Networks and Pathways/genetics , Mutation , Triglycerides/metabolism , Industrial Microbiology/methods , Lipomyces/isolation & purification , Metabolic Engineering/methods , Mutagenesis
3.
Phytochemistry ; 84: 40-6, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23009878

ABSTRACT

Two of the most agriculturally important cereal crop plants are wheat (Triticum aestivum) and rice (Oryza sativa). Rice has been shown to produce a number of diterpenoid natural products as phytoalexins and/or allelochemicals--specifically, labdane-related diterpenoids, whose biosynthesis proceeds via formation of an eponymous labdadienyl/copalyl diphosphate (CPP) intermediate (e.g., the ent-CPP of gibberellin phytohormone biosynthesis). Similar to rice, wheat encodes a number of CPP synthases (CPS), and the three CPS characterized to date (TaCPS1-3) all have been suggested to produce ent-CPP. However, several of the downstream diterpene synthases will only react with CPP intermediate of normal or syn, but not ent, stereochemistry, as described in the accompanying report. Investigation of additional CPS did not resolve this issue, as the only other functional synthase (TaCPS4) also produced ent-CPP. Chiral product characterization of all the TaCPS then established that TaCPS2 uniquely produces normal, rather than ent-, CPP, thus, providing a suitable substrate source for the downstream diterpene synthases. Notably, TaCPS2 is most homologous to the similarly stereochemically differentiated syn-CPP synthase from rice (OsCPS4), while the non-inducible TaCPS3 and TaCPS4 cluster with the rice OsCPS1 required for gibberellin phytohormone biosynthesis, as well as with a barley (Hordeum vulgare) CPS (HvCPS1) that also is characterized here as similarly producing ent-CPP. These results suggest that diversification of labdane-related diterpenoid metabolism beyond the ancestral gibberellins occurred early in cereal evolution, and included the type of stereochemical variation demonstrated here.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Diterpenes/metabolism , Edible Grain/metabolism , Plant Proteins/metabolism , Triticum/enzymology , Algorithms , Alkyl and Aryl Transferases/genetics , Amino Acid Sequence , Computational Biology , Diterpenes/chemistry , Phylogeny , Plant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Alignment
4.
Biosci Biotechnol Biochem ; 73(3): 772-5, 2009 Mar 23.
Article in English | MEDLINE | ID: mdl-19270400

ABSTRACT

In vitro assays using recombinant enzymes enabled three cDNAs encoding ent-copalyl diphosphate synthases to be identified in wheat (Triticum aestivum): TaCPS1, TaCPS2, and TaCPS3. The phylogenetic tree and expression analyses suggest that TaCPS3 is responsible for gibberellin biosynthesis, while TaCPS1 and TaCPS2 are possible functional homologs of diterpene cyclase genes OsCPS2 and OsCPS4 involved in phytoalexin biosynthesis in rice.


Subject(s)
Alkyl and Aryl Transferases/genetics , DNA, Complementary/genetics , Evolution, Molecular , Oryza/genetics , Oryza/metabolism , Plant Proteins/genetics , Terpenes/metabolism , Triticum/enzymology , Cloning, Molecular , Genes, Plant/genetics , Phylogeny , Sesquiterpenes , Triticum/genetics , Phytoalexins
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