ABSTRACT
Intra-species discrimination in the highly clonal pathogen Mycobacterium ulcerans was studied in a diverse collection of isolates by PCR amplification of a short sequence repeat locus containing heterogeneous arrays of tri-nucleotide repeats with an ACC consensus pattern. Post-amplification analysis indicated excellent typeability and identified five M. ulcerans alleles, including a unique Angolan type differentiated for the first time among a genetically conserved cluster of African isolates. These results are consistent with previously investigated independent markers, and provide an additional locus for variable number tandem repeat-based typing of M. ulcerans.
Subject(s)
Bacterial Typing Techniques , Minisatellite Repeats/genetics , Mycobacterium Infections, Nontuberculous/diagnosis , Mycobacterium ulcerans/classification , Mycobacterium ulcerans/isolation & purification , Polymerase Chain Reaction/methods , Africa , DNA, Bacterial/analysis , DNA, Bacterial/isolation & purification , Humans , Mycobacterium Infections, Nontuberculous/microbiology , Mycobacterium ulcerans/genetics , Sequence Alignment , Sequence Analysis, DNA , Species SpecificityABSTRACT
SETTING: Public health laboratories in Ghana performing tuberculosis (TB) microscopy. OBJECTIVE: To assess the situation of the laboratories in terms of staff strength, technical skills, documentation, biosafety practices, equipment, supplies and disposal systems. DESIGN: Methods used for data collection were interviews using a structured questionnaire, informal observation of laboratory registers, disposal systems and safety measures for sputum handling. RESULTS: Of 114 laboratories visited between 2000 and 2001, 102 (89.5%) were performing TB microscopy. Of the staff working in the laboratories, 9% were medical technologists, 24% laboratory technicians, 37% laboratory assistants and 30% orderlies. Average false-negative and -positive rates were respectively 13% and 14%. Although most of the centres (85.3%) were using the recommended TB laboratory register for recording, in most cases they were not filled in accurately or completely. The majority of the available microscopes had mechanical or optical faults. Availability of other materials for smear preparation and staining ranged from 44% to 82%. The main methods employed for disposal of laboratory waste were burning and burying, but conditions were poor in most of the facilities visited. CONCLUSION: Training of laboratory personnel in TB microscopy and establishment of a quality assurance system are needed in Ghana.
Subject(s)
Microscopy , Task Performance and Analysis , Tuberculosis, Pulmonary/diagnosis , Bacteriological Techniques , False Negative Reactions , Ghana/epidemiology , Humans , Laboratories, Hospital , Medical Laboratory Personnel , Medical Waste Disposal , Observer Variation , Occupational Health , Registries , Specimen Handling , Sputum/chemistry , Staining and Labeling , Surveys and Questionnaires , Tuberculosis, Pulmonary/epidemiologyABSTRACT
A period of acute diarrhoea in infants is often associated with anorexia and weight loss. Catch-up growth is, therefore, necessary and this depends very much on the type of food, in terms of nutrient density, protein quality and digestibility, given to the child. Fermented (F) and non-fermented (NF) maize-soybean porridges of increased nutrient density were formulated and compared with traditionally fermented maize-only porridge (P) for acceptability using mothers in peri-urban Ghana as well as urban Nigeria as subjects. Subsequently, infants hospitalised in paediatric wards for acute diarrhoea, from the same communities in both countries, were assigned randomly to one or other of the three porridges. Infant subjects in all cases fell within the ages of 6-15 months. Complementary to regular breast-feeding, infants could consume as much porridge as they wanted and their total daily consumption was interpreted as an indication of acceptance. Although mothers in both the environments of Ghana and Nigeria rated P as more acceptable than F and NF, no significant difference was recorded in the quantitative intake by infants of the three formula groups. By adding enzyme-rich cereal malt flour (at the 1-5% level by weight) as a viscosity-thinning agent to F and NF porridges, it was possible to feed these porridges to infants at total solids concentration levels of 20-25% (wet basis) which is approximately double the solid matter content of the P porridge. Consequently, the daily nutrient intake by infants consuming F and NF porridges was considerably higher compared to the P porridge group. It is concluded that the concept of high nutrient density weaning foods is a feasible vehicle for an improvement of nutrient supply to infants.
