Cleaning up after the Party: Removing the Byproducts of On-Surface Ullmann Coupling.

Ullmann coupling is one of the most frequently employed methodologies for producing π-conjugated surface-confined polymers. One unfortunate side product of the reaction is the creation of metal halide islands formed from liberated halogen atoms. Following the coupling reaction, these halide islands can account for a large proportion of the substrate surface area and thus inhibit domain growth and effectively poison the catalyst. Here, we describe an efficient and reliable methodology for removing the halogen byproduct at room temperature by exposure to a beam of atomic hydrogen; this action removes the halogen atoms in a matter of minutes, with minimal impact to the polymer structure. We also find that it is possible under certain circumstances to preserve the pre-exposure epitaxy after removal of the halogen. This finding provides a convenient and straightforward technique for addressing the most often-cited drawback of the on-surface Ullman coupling methodology and provides access to a previously inaccessible parameter space for these types of experiments.

Adsorption, Deprotonation, and Decarboxylation of Isophthalic Acid on Cu(111).

The surface-assisted reaction of rationally designed organic precursors is an emerging approach toward fabricating atomically precise nanostructures. Recently, on-surface decarboxylation has attracted attention due to its volatile by-products, which tend to leave the surface during the reaction means only the desired products are retained on the surface. However, in addition to acting as the reactive site, the carboxylic acid groups play a vital role in the adsorption configuration of small-molecule molecular precursors and therefore in the reaction pathways. Here, scanning tunnelling microscopy (STM), synchrotron radiation photoelectron spectroscopy (SRPES), and near-edge X-ray absorption fine structure (NEXAFS) spectroscopy have been employed to characterize the monodeprotonated, fully deprotonated, and decarboxylated products of isophthalic acid (IPA) on Cu(111). IPA is partially reacted (monodeprotonated) upon adsorption on Cu(111) at room temperature. Angular-dependent X-ray photoelectron spectroscopy reveals that IPA initially anchors to the surface via the carboxylate group. After annealing, the molecule fully deprotonates and reorients so that it anchors to the surface via both carboxylate groups in a bipodal configuration. NEXAFS confirms that the molecule is tilted upon adsorption and after full deprotonation. Following decarboxylation, the flat-lying molecule forms into oligomeric motifs on the surface. This work demonstrates the importance of molecular adsorption geometry for on-surface reactions.

Periodic and nonperiodic chiral self-assembled networks from 1,3,5-benzenetricarboxylic acid on Ag(111).

Surface-catalyzed reactions provide a versatile route to synthesizing new 2D materials. Here, we show that the statistical nature of an activated reaction can lead to a diversity of intermolecular bonding motifs through partially-reacted molecules. With increasing annealing, we observe different periodic, well-defined phases of 1,3,5-benzenetricarboxylic acid on Ag(111), where the surface structure in each case is defined by the degree of deprotonation of the carboxylic groups. Over a wide range of deprotonation levels (∼50% to near 100%), we observe a granular alloy comprising two distinct phases in a continuous network. This ordered phase lacks well-defined translational symmetry, is stabilized through both intermolecular interactions and epitaxy, and demonstrates a design approach to creating non-crystalline phases by capitalizing on the chemical diversity of partially reacted molecules on a surface.

On-surface synthesis of polyethylenedioxythiophene.

On-surface synthesis of conjugated polymers is made challenging by the need to promote the desired reaction while preventing or minimizing unwanted ancillary reactions that compromise the product integrity. We perform a comprehensive study of the reactions of 2,5-dichloro-3,4-ethylenedioxythiophene on coinage metal surfaces, and demonstrate that only on Ag(111) can we obtain a planar polymer product, polyethylenedioxythiophene (PEDOT).