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1.
Prep Biochem Biotechnol ; 52(7): 835-844, 2022.
Article in English | MEDLINE | ID: mdl-34762005

ABSTRACT

The purpose of this study was to examine the biochemical properties of African bush mango (Irvingia gabonensis) pulp PPO. PPO was purified from I. gabonensis fruit pulp in three steps and characterized. A purification fold of 343 with specific activity of 216 U/mg and 13% recovery were obtained as well as molecular weight of 32.67 kDa was observed. The optimum pH and temperature were found to be pH 7.0 and 50 °C respectively while the enzyme showed instability at low pH 2-4 with total inactivation at pH 2 but maximal at pH 5-9 with remaining residual activity of 60-90%, whereas, total enzyme activity inactivation was observed at 90 °C. However, Cu2+, Fe2+ and Mg2+ enhanced the PPO activity but inhibited by Ca2+, Ba2+, K+ and Na+. Notably, purified PPO was inactivated completely by urea at concentration above 10 mM while Km and Vmax values were estimated to be 7.34 mM and 0.36 U/min for catechol, 10.76 mM and 0.30 U/min for L-DOPA, and 14.90 mM and 0.26 U/min for tyrosine, respectively. The activity of PPO in I. gabonensis fruit and its juicy product could be controlled at high temperature in acidified medium.


Subject(s)
Fruit , Mangifera , Catechol Oxidase , Cellulose , Fruit/chemistry
2.
J Biomol Struct Dyn ; 39(16): 6195-6217, 2021 Oct.
Article in English | MEDLINE | ID: mdl-32686993

ABSTRACT

The novel coronavirus of 2019 (nCoV-19) has become a pandemic, affecting over 205 nations with over 7,410,000 confirmed cases which has resulted to over 418,000 deaths worldwide. This study aimed to identify potential therapeutic compounds and phytochemicals of medicinal plants that have potential to modulate the expression network of genes that are involve in SARS-CoV-2 pathology in human host and to understand the dynamics key proteins involved in the virus-host interactions. The method used include gene network analysis, molecular docking, and sequence and structure dynamics simulations. The results identified DNA-dependent protein kinase (DNA-PK) and Protein kinase CK2 as key players in SARS-CoV-2 lifecycle. Among the predicted drugs compounds, clemizole, monorden, spironolactone and tanespimycin showed high binding energies; among the studied repurposing compounds, remdesivir, simeprevir and valinomycin showed high binding energies; among the predicted acidic compounds, acetylursolic acid and hardwickiic acid gave high binding energies; while among the studied anthraquinones and glycosides compounds, ellagitannin and friedelanone showed high binding energies against 3-Chymotrypsin-like protease (3CLpro), Papain-like protease (PLpro), helicase (nsp13), RNA-dependent RNA polymerase (nsp12), 2'-O-ribose methyltransferase (nsp16) of SARS-CoV-2 and DNA-PK and CK2alpha in human. The order of affinity for CoV proteins is 5Y3E > 6NUS > 6JYT > 2XYR > 3VB6. Finally, medicinal plants with phytochemicals such as caffeine, ellagic acid, quercetin and their derivatives could possibly remediate COVID-19.Communicated by Ramaswamy H. Sarma.


Subject(s)
COVID-19 , Plants, Medicinal , Humans , Molecular Docking Simulation , Molecular Dynamics Simulation , Phytochemicals , SARS-CoV-2 , Sequence Analysis
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