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1.
Ecology ; 102(9): e03449, 2021 09.
Article in English | MEDLINE | ID: mdl-34166532

ABSTRACT

The way resource availability predictably alters interspecific interactions and may favor one resource-acquisition strategy over another is critical for understanding context dependency. The ubiquity of nitrogen (N) limitation across terrestrial environments is a driver of plant competition and the association of some plants with N-fixing bacteria (rhizobia) may alleviate competition with nonfixing plants. Conversely, when available soil N is elevated, competitive advantages imparted by rhizobia are hypothesized to decline because nonfixing species are able to acquire those nutrients readily. We manipulated competition, soil N, and soil microbial inoculation, employing the ground bean Amphicarpaea bracteata, a native annual N-fixing legume, and jewelweed Impatiens capensis, a native co-occurring nonfixing annual. We found that legume performance was negatively impacted by interspecific competition, but less so under lower soil N in both the greenhouse and field. The legume invested a greater proportion of resources in rhizobia when competing, but only under low N. Also consistent with predictions, a competition-by-microbial-inoculation interaction demonstrated that negative effects of competition were alleviated by rhizobia. Finally, we detected an interaction between inoculation and fertilization, whereby N addition resulted in increased performance for uninoculated legumes, but a small decline in performance for inoculated plants, the latter likely representing a cost of mutualism. Thus, several lines of evidence point to the legume-rhizobia mutualism being more beneficial under competition and limited soil N. Competing I. capensis, in contrast, benefited from N addition regardless of the addition of soil microbes. In a survey of natural populations, legume and rhizobia growth were positively correlated at population edges (where interspecific competition is expected to be higher, the mutualism is stronger), whereas at population centers we found no association. Isotopic evidence confirmed a higher degree of rhizobial N-fixation at population edges compared to centers. Taken together, our results demonstrate an important role for the largely private channel of nitrogen in legume competitive performance, but with the benefits imparted by rhizobia being predictably weaker at higher soil fertility. We speculate that alleviation of competitive impacts through resource partitioning is an important and yet largely overlooked aspect of the evolutionary ecology of legume-rhizobia interactions.


Subject(s)
Fabaceae , Ecology , Nitrogen
2.
Leukemia ; 31(3): 720-727, 2017 03.
Article in English | MEDLINE | ID: mdl-27604819

ABSTRACT

Heterozygous somatic mutations affecting the spliceosome gene SF3B1 drive age-related clonal hematopoiesis, myelodysplastic syndromes (MDS) and other neoplasms. To study their role in such disorders, we generated knock-in mice with hematopoietic-specific expression of Sf3b1-K700E, the commonest type of SF3B1 mutation in MDS. Sf3b1K700E/+ animals had impaired erythropoiesis and progressive anemia without ringed sideroblasts, as well as reduced hematopoietic stem cell numbers and host-repopulating fitness. To understand the molecular basis of these observations, we analyzed global RNA splicing in Sf3b1K700E/+ hematopoietic cells. Aberrant splicing was associated with the usage of cryptic 3' splice and branchpoint sites, as described for human SF3B1 mutants. However, we found a little overlap between aberrantly spliced mRNAs in mouse versus human, suggesting that anemia may be a consequence of globally disrupted splicing. Furthermore, the murine orthologues of genes associated with ring sideroblasts in human MDS, including Abcb7 and Tmem14c, were not aberrantly spliced in Sf3b1K700E/+ mice. Our findings demonstrate that, despite significant differences in affected transcripts, there is overlap in the phenotypes associated with SF3B1-K700E between human and mouse. Future studies should focus on understanding the basis of these similarities and differences as a means of deciphering the consequences of spliceosome gene mutations in MDS.


Subject(s)
Anemia, Sideroblastic/etiology , Anemia, Sideroblastic/pathology , Hematopoiesis/genetics , Myelodysplastic Syndromes/complications , Myelodysplastic Syndromes/genetics , Phosphoproteins/genetics , RNA Splicing Factors/genetics , RNA Splicing , Anemia, Sideroblastic/mortality , Animals , Disease Models, Animal , Gene Targeting , Humans , Mice , Mice, Transgenic , Mutation , Phenotype , RNA Splicing Factors/metabolism
3.
Biomaterials ; 31(20): 5408-17, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20398927

ABSTRACT

Porous nanocrystalline silicon (pnc-Si) is new type of silicon nanomaterial with potential uses in lab-on-a-chip devices, cell culture, and tissue engineering. The pnc-Si material is a 15 nm thick, freestanding, nanoporous membrane made with scalable silicon manufacturing. Because pnc-Si membranes are approximately 1000 times thinner than any polymeric membrane, their permeability to small solutes is orders-of-magnitude greater than conventional membranes. As cell culture substrates, pnc-Si membranes can overcome the shortcomings of membranes used in commercial transwell devices and enable new devices for the control of cellular microenvironments. The current study investigates the feasibility of pnc-Si as a cell culture substrate by measuring cell adhesion, morphology, growth and viability on pnc-Si compared to conventional culture substrates. Results for immortalized fibroblasts and primary vascular endothelial cells are highly similar on pnc-Si, polystyrene and glass. Significantly, pnc-Si dissolves in cell culture media over several days without cytotoxic effects and stability is tunable by modifying the density of a superficial oxide. The results establish pnc-Si as a viable substrate for cell culture and a degradable biomaterial. Pnc-Si membranes should find use in the study of molecular transport through cell monolayers, in studies of cell-cell communication, and as biodegradable scaffolds for three-dimensional tissue constructs.


Subject(s)
Cell Culture Techniques/methods , Membranes, Artificial , Nanoparticles/chemistry , Silicon/pharmacology , Animals , Cell Adhesion/drug effects , Cell Movement/drug effects , Cell Proliferation/drug effects , Cell Survival/drug effects , Cells, Cultured , Coculture Techniques , Culture Media , Glass , Humans , Mice , Permeability/drug effects , Porosity/drug effects , Solubility/drug effects , Temperature
4.
J Evol Biol ; 22(6): 1295-307, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19490388

ABSTRACT

This study explored genetic variation and co-variation in multiple functional plant traits. Our goal was to characterize selection, heritabilities and genetic correlations among different types of traits to gain insight into the evolutionary ecology of plant populations and their interactions with insect herbivores. In a field experiment, we detected significant heritable variation for each of 24 traits of Oenothera biennis and extensive genetic covariance among traits. Traits with diverse functions formed several distinct groups that exhibited positive genetic covariation with each other. Genetic variation in life-history traits and secondary chemistry together explained a large proportion of variation in herbivory (r(2) = 0.73). At the same time, selection acted on lifetime biomass, life-history traits and two secondary compounds of O. biennis, explaining over 95% of the variation in relative fitness among genotypes. The combination of genetic covariances and directional selection acting on multiple traits suggests that adaptive evolution of particular traits is constrained, and that correlated evolution of groups of traits will occur, which is expected to drive the evolution of increased herbivore susceptibility. As a whole, our study indicates that an examination of genetic variation and covariation among many different types of traits can provide greater insight into the evolutionary ecology of plant populations and plant-herbivore interactions.


Subject(s)
Genetic Variation , Multifactorial Inheritance , Oenothera biennis/physiology , Quantitative Trait, Heritable , Selection, Genetic , Food Chain , Oenothera biennis/anatomy & histology , Oenothera biennis/genetics , Phenols/metabolism
5.
Ecology ; 89(8): 2187-96, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18724729

ABSTRACT

Coexistence of host-specific herbivores on plants is believed to be governed by interspecific interactions, but few empirical studies have systematically unraveled these dynamics. We investigated the role of several factors in promoting coexistence among the aphids Aphis nerii, Aphis asclepiadis, and Myzocallis asclepiadis that all specialize on common milkweed (Asclepias syriaca). Competitive exclusion is thought to occur when interspecific competition is stronger than intraspecific competition. Consequently, we investigated whether predators, mutualists, or resource quality affected the strength of intra- vs. interspecific competition among aphids in factorial manipulations of competition with exposure to predation, ants, and variable plant genotypes in three separate experiments. In the predation x competition experiment, predators reduced aphid per capita growth by 66%, but the strength of intra- and interspecific competition did not depend on predators. In the ants x competition experiment, ants reduced per capita growth of A. nerii and M. asclepiadis (neither of which were mutualists with ants) by approximately one-half. In so doing, ants ameliorated the negative effects of these competitors on ant-tended A. asclepiadis by two-thirds, representing a novel benefit of ant-aphid mutualism. Nevertheless, ants alone did not explain the persistence of competitively inferior A. asclepiadis as, even in the presence of ants, interspecific competition remained stronger than intraspecific competition. In the plant genotype x competition experiment, both A. asclepiadis and M. asclepiadis were competitively inferior to A. nerii, with the strength of interspecific competition exceeding that of intraspecific competition by 83% and 23%, respectively. Yet these effects differed among milkweed genotypes, and there were one or more plant genotypes for each aphid species where coexistence was predicted. A synthesis of our results shows that predators play little or no role in preferentially suppressing competitively dominant A. nerii. Nonetheless, A. asclepiadis benefits from ants, and A. asclepiadis and M. asclepiadis may escape competitive exclusion by A. nerii on select milkweed genotypes. Taken as a whole, the coexistence of three host-specific aphid species sharing the same resource was promoted by the dual action of ants as antagonists and mutualists and by genetic diversity in the plant population itself.


Subject(s)
Aphids/physiology , Asclepias/parasitology , Animals , Ants/physiology , Asclepias/genetics , Feeding Behavior , Host-Parasite Interactions , Predatory Behavior , Species Specificity , Spiders
6.
Mol Ecol Resour ; 8(2): 434-6, 2008 Mar.
Article in English | MEDLINE | ID: mdl-21585813

ABSTRACT

We developed nine polymorphic microsatellite loci for evening primrose (Oenothera biennis). These loci have two to 18 alleles per locus and observed heterozygosities ranging from 0 to 0.879 in a sample of 34 individuals. In a pattern consistent with the functionally asexual reproductive system of this species, 17/36 pairs of loci revealed significant linkage disequilibrium and three loci showed significant deviations from Hardy-Weinberg equilibrium. The loci will be informative in identifying genotypes in multigenerational field studies to assess changes in genotype frequencies.

7.
J Evol Biol ; 18(1): 238-42, 2005 Jan.
Article in English | MEDLINE | ID: mdl-15669980

ABSTRACT

The evolutionary mechanisms underlying the maintenance of invariant traits are poorly understood, partly because the lack of variance makes these mechanisms difficult to study. Although the number of cotyledons that plant species produce is highly canalized, populations of plants frequently contain individuals with abnormal cotyledon numbers. In a garden study with 1857 wild radish plants from 75 paternal half-sibling families, 89 (almost 5%) had cotyledon numbers less or greater than two. We found evidence for direct selection on cotyledon number, but no evidence for additive genetic variation for cotyledon number. In spite of the very large sample size, our power to detect variation and selection was hampered by the small number of individuals (10) producing more than two cotyledons. Thus, our results provide support for both a lack of genetic variation and selection as reasons for the current lack of variation in wild radish cotyledon number.


Subject(s)
Genetic Variation , Raphanus/genetics , Selection, Genetic , Biological Evolution , Plant Leaves/anatomy & histology
8.
Science ; 294(5541): 321-6, 2001 Oct 12.
Article in English | MEDLINE | ID: mdl-11598291

ABSTRACT

When individuals of two species interact, they can adjust their phenotypes in response to their respective partner, be they antagonists or mutualists. The reciprocal phenotypic change between individuals of interacting species can reflect an evolutionary response to spatial and temporal variation in species interactions and ecologically result in the structuring of food chains. The evolution of adaptive phenotypic plasticity has led to the success of organisms in novel habitats, and potentially contributes to genetic differentiation and speciation. Taken together, phenotypic responses in species interactions represent modifications that can lead to reciprocal change in ecological time, altered community patterns, and expanded evolutionary potential of species.


Subject(s)
Biological Evolution , Ecosystem , Phenotype , Animals , Environment , Food Chain , Genetic Variation , Genotype , Mutation , Plant Physiological Phenomena , Predatory Behavior , Symbiosis
9.
Trends Ecol Evol ; 16(3): 123-124, 2001 Mar 01.
Article in English | MEDLINE | ID: mdl-11179571
10.
Am Nat ; 157(5): 555-69, 2001 May.
Article in English | MEDLINE | ID: mdl-18707262

ABSTRACT

Herbivory has many effects on plants, ranging from shifts in primary processes such as photosynthesis, growth, and phenology to effects on defense against subsequent herbivores and other species interactions. In this study, I investigated the effects of herbivory on seed and seedling characteristics of several families of wild radish (Raphanus raphanistrum) to test the hypothesis that herbivory may affect the quality of offspring and the resistance of offspring to plant parasites. Transgenerational effects of herbivory may represent adaptive maternal effects or factors that constrain or amplify natural selection on progeny. Caterpillar (Pieris rapae) herbivory to greenhouse-grown plants caused plants in some families to produce smaller seeds and those in other families to produce larger seeds compared with undamaged controls. Seed mass was positively associated with probability of emergence in the field. The number of setose trichomes, a putative plant defense, was higher in the progeny of damaged plants in some families and lower in the progeny of damaged plants in other families. In a field experiment, plant families varied in their resistance to several herbivores and pathogens as well as in growth rate and time to flowering. Seeds from damaged parent plants were more likely to become infested with a plant virus. Although herbivory on maternal plants did not directly affect interactions of offspring with other plant parasites, seed mass influenced plant resistance to several attackers. Thus, herbivory affected seed characters, which mediated interactions between plants and their parasites. Finally, irrespective of seed mass, herbivory on maternal plants influenced components of progeny fitness, which was dependent on plant family. Natural selection may act on plant responses to herbivory that affect seedling-parasite interactions and, ultimately, fitness.

11.
Proc Biol Sci ; 267(1455): 1857-61, 2000 Sep 22.
Article in English | MEDLINE | ID: mdl-11052536

ABSTRACT

Indirect defences involve the protection of a host organism by a mutualistic partner. Threat of predation to the host organism may induce the production of rewards and/or signals that attract the mutualistic partner. In laboratory and field experiments we show that threatened lycaenid butterfly larvae (Plebejus acmon) produce more nectar rewards from their gland and were tended by protective ants twice as much as controls. Ant attendance did not affect the leaf consumption or feeding behaviour of larvae in the absence of predators. Inducible nectar production and indirect defence in this system may be a mechanism by which larvae provide rewards for services when they are needed the most. Such a system may stabilize the mutualistic association between lycaenid larvae and ants by preventing exploitation by either partner.


Subject(s)
Ants/physiology , Butterflies/physiology , Symbiosis , Animals , Feeding Behavior , Larva/physiology
12.
Trends Plant Sci ; 5(7): 309-13, 2000 Jul.
Article in English | MEDLINE | ID: mdl-10871904

ABSTRACT

Plants that overcompensate for herbivory are relatively healthier when damaged. In this mutualistic association, the herbivore benefits from the plant, and the plant benefits from the herbivore's actions. As long as the benefit to the plant outweighs the costs imposed by browsing herbivores, this interaction should remain stable. Many apparently parasitic associations can be mutually beneficial under some environmental conditions.


Subject(s)
Plant Physiological Phenomena , Animals
13.
Curr Opin Plant Biol ; 3(4): 329-35, 2000 Aug.
Article in English | MEDLINE | ID: mdl-10873845

ABSTRACT

Recent research bridging mechanistic and ecological approaches demonstrates that plant attributes can affect herbivores, natural enemies of herbivores, and their interaction. Such effects may be genetically variable among plants and/or induced in individual plants by herbivore attack, and are mediated by primary plant attributes (i.e. nutritional quality and physical structure) and defense-related products (i.e. secondary chemicals and plant volatiles), and may be modified by human activity (e.g. by the introduction of Bacillus thuringiensis). The study of tri-trophic interactions is important in order to understand natural species interactions and to manipulate these interactions in pest control.


Subject(s)
Crops, Agricultural/parasitology , Ecology , Host-Parasite Interactions , Plant Diseases/parasitology , Animals , Bacillus thuringiensis/genetics , Bacillus thuringiensis/physiology , Biotechnology , Crops, Agricultural/drug effects , Crops, Agricultural/growth & development , Crops, Agricultural/microbiology , Host-Parasite Interactions/drug effects , Insecta/physiology , Pest Control, Biological , Plant Diseases/genetics , Plant Diseases/microbiology , Plant Growth Regulators/pharmacology , Plant Growth Regulators/physiology
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