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1.
Curr Genomics ; 21(1): 46-55, 2020 Jan.
Article in English | MEDLINE | ID: mdl-32655298

ABSTRACT

AIM: The aim of this study was to explore the expression of exosomal non-coding RNAs (ncRNAs) in the sera of patients with HCC versus control. METHODS: Firstly, Bioinformatics analysis was conducted to retrieve ncRNAs specific to HCC (hsa-miRNA-1298 and lncRNA-RP11-583F2.2). Afterwards, extraction and characterization of exosomes were performed. We measured the expression of the chosen exosomal RNAs by reverse transcriptase quantitative real-time PCR in sera of 60 patients with HCC, 42 patients with chronic hepatitis C (CHC) infection and 18 healthy normal volunteers. RESULTS: The exosomal ncRNAs [hsa-miRNA-1298, lncRNA-RP11-583F2.2] had better sensitivity and specificity than alpha-fetoprotein (AFP) in HCC diagnosis. CONCLUSION: The exosomal hsa-miRNA-1298, lncRNA-RP11-583F2.2 can be potential biomarkers for HCC diagnosis.

2.
Trop Biomed ; 35(2): 321-329, 2018 Jun 01.
Article in English | MEDLINE | ID: mdl-33601806

ABSTRACT

This study aimed first to estimate the prevalence of subclinical mastitis (SCM) among dairy cows and buffaloes of smallholders who sell milk directly to consumers through bulk tanks of milk distributors. The second aim is to estimate the prevalence of Escherichia coli in milk of SCM cases and identify its virulence genes and to emphasize the public health risk form drinking this milk. A total of 227 and 174 dairy cows and buffaloes, respectively from Kafrelsheikh Governorate, Egypt were examined with California Mastitis Test (CMT) to estimate the prevalence of SCM. Samples were also screened for E. coli using classical bacteriological and molecular methods. The prevalence of CMT-positive cows and buffaloes samples examined was 47.4% (49.9% and 44.3% for cows and buffaloes, respectively). Cows were found to be at a higher risk of getting high CMT score than buffaloes. E. coli was detected bacteriologically in 16.4% and in 27.2% of the CMT-positive cows and buffalo samples, respectively. A total of 83.1% and 75.6% of isolates were confirmed as E. coli using PCR technique. A multiplex PCR assay was used to identify five virulence genes in the E. coli isolates; the eae gene for enteropathogenic E. coli, stx for Shiga toxin-producing E. coli, elt and est for enterotoxigenic E. coli, and the hlyA of the enterohemolysin gene for enterohemorrhagic E. coli. Only one E. coli strain identified carried two virulence genes (eae and est). The high prevalence of SCM among dairy cows and buffaloes in the study area indicated that there is high risk to consumers who consume milk of these animals. Also, control of SCM is a prerequisite among smallholders in Egypt in order to minimize its deleterious effects such as microbial antibiotic resistance and public health hazards. To our knowledge, this is the first study that highlights the ecology of virulence by E. coli causing SCM in Kafrelsheikh governorate, Egypt. This study offers the basis for further phenotypic and molecular characterization of E. coli found in raw milk in order to guarantee safe consumption of raw milk and milk products.

3.
Expert Rev Gastroenterol Hepatol ; 10(7): 869-77, 2016 Jul.
Article in English | MEDLINE | ID: mdl-27215316

ABSTRACT

BACKGROUND: Long noncoding RNAs(lncRNAs) have emerged as key elements in modulating gene expression in different biological contexts. PATIENTS AND METHODS: We used quantitative real-time PCR (Qpcr) to evaluate the expression of lncRNA-UCA1 and C-JUN in serum of 70 patients with hepatocellular carcinoma (HCC), 32 patients chronic hepatitis C (CHC) and 38 healthy subjects and their correlation with different clinicopathological factors. RESULTS: The expression of lncRNA-UCA1 and C-JUN was positive in 91.4%HCC patients with strong discriminating power between HCC and healthy subjects and CHC patients as well. The median follow up period was 29 months. The survival analysis showed that both lncRNA-UCA1 and C-JUN were independent prognostic factors. Of note, we identified C-JUN expression changes consistent with the lncRNA-UCA1 target regulation. CONCLUSION: This information sheds light on the possible role of lncRNA-UCA1 and C-JUN mRNA as promising diagnostic and prognostic markers as well as potential therapeutic targets in HCC.


Subject(s)
Biomarkers, Tumor/genetics , Carcinoma, Hepatocellular/genetics , Liver Neoplasms/genetics , Proto-Oncogene Proteins c-jun/genetics , RNA, Long Noncoding/genetics , Area Under Curve , Biomarkers, Tumor/blood , Carcinoma, Hepatocellular/blood , Carcinoma, Hepatocellular/mortality , Carcinoma, Hepatocellular/pathology , Case-Control Studies , Disease Progression , Disease-Free Survival , Female , Gene Expression Regulation, Neoplastic , Humans , Kaplan-Meier Estimate , Liver Neoplasms/blood , Liver Neoplasms/mortality , Liver Neoplasms/pathology , Male , Middle Aged , Neoplasm Recurrence, Local , Predictive Value of Tests , Proportional Hazards Models , Proto-Oncogene Proteins c-jun/blood , RNA, Long Noncoding/blood , RNA, Messenger/blood , RNA, Messenger/genetics , ROC Curve , Real-Time Polymerase Chain Reaction , Risk Factors , Time Factors
4.
Transl Res ; 168: 134-145, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26551349

ABSTRACT

There is an increasing interest in using long noncoding RNAs (lncRNAs) as biomarkers in cancer. Predictive biomarkers in hepatocellular carcinoma (HCC) have great benefit in the choice of therapeutic modality for HCC. The aim of this study is to assess lncRNA-urothelial carcinoma associated-1 (lncRNA-UCA1) and WD repeat containing, antisense to TP53 (WRAP53) expression as novel noninvasive biomarkers for diagnosis of HCC in sera of HCC patients compared with chronic hepatitis C virus (HCV) patients and healthy volunteers and to analyze their relationship with respect to the clinicopathologic features. We retrieved HCC characteristic lncRNAs, lncRNA-UCA1 and lncRNA-WRAP53, based on the microarray signature profiling (released by LncRNADisease database). Quantitative reverse-transcriptase polymerase chain reaction assay (RT-qPCR) was then used to evaluate the expression of selected lncRNAs in the serum of 160 participants. Furthermore, in 20 of 82 HCC cases involved in the study, we examined the expression of lncRNA-UCA1 and lncRNA-WRAP53 in 20 HCC tissues and adjacent nontumor tissues and analyzed its correlation with the serum level of these lncRNAs. The prognostic significance of the investigated parameters in HCC patients was explored. We found that lncRNA-UCA1 and lncRNA-WRAP53 were significantly higher in sera of HCC than those with chronic HCV infection or healthy volunteers. Our data suggested that the increased expression of UCA1 and WRAP53 was associated with advanced clinical parameters in HCC. Of note, tissue levels of the chosen lncRNAs strongly correlate with their sera level. The combination of both lncRNAs with serum alpha fetoprotein resulted in improved sensitivity to 100%. The median follow-up period was 21.5 months. LncRNA-WRAP53 was significant independent prognostic markers in relapse-free survival. LncRNA-UCA1 and lncRNA-WRAP53 upregulation may serve as novel serum biomarkers for HCC diagnosis and prognosis.


Subject(s)
Carcinoma, Hepatocellular/metabolism , Gene Expression Regulation, Neoplastic/physiology , Liver Neoplasms/metabolism , RNA, Long Noncoding/metabolism , Telomerase/metabolism , Transcriptome , Biomarkers, Tumor/blood , Carcinoma, Hepatocellular/blood , Carcinoma, Hepatocellular/genetics , Female , Humans , Liver Neoplasms/blood , Liver Neoplasms/genetics , Male , Middle Aged , Molecular Chaperones , RNA, Long Noncoding/blood , RNA, Long Noncoding/genetics , Telomerase/blood , Telomerase/genetics
6.
Hum Pathol ; 29(7): 743-9, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9670833

ABSTRACT

The reported high incidence of anti-HCV seropositivity in the Egyptian population seems surprising. Some suggest that schistosomiasis is the responsible factor, either by producing false positivity for HCV antibodies or by predisposing to actual HCV infection in some way. In an attempt to investigate this unclear relationship on a histological level, we performed a thorough semiquantitative morphological study of liver biopsy specimens from 44 anti-HCV-positive Egyptian patients with chronic liver disease. More than half of these patients (23) had serological evidence of schistosomiasis. The results have shown that all 44 liver biopsy specimens demonstrated the histopathological features known to be characteristic of chronic HCV hepatitis. Statistical analysis showed no significant difference between the schistosomal and nonschistosomal groups regarding the semiquantitative histological scores of these features. This study confirms the presence of definite HCV-induced hepatic pathology in all anti-HCV seropositive cases. More importantly, it shows the lack of enhancement of this pathology in the schistosomal patients.


Subject(s)
Hepacivirus/immunology , Hepatitis C/pathology , Liver/pathology , Schistosomiasis haematobia/pathology , Schistosomiasis mansoni/pathology , Adult , Animals , Antibodies, Helminth/analysis , Female , Hepatitis B Surface Antigens/analysis , Hepatitis B virus/immunology , Hepatitis C/complications , Hepatitis C/immunology , Hepatitis C Antibodies/analysis , Humans , Immunoenzyme Techniques , Liver/parasitology , Liver/virology , Male , Middle Aged , Schistosoma haematobium/immunology , Schistosoma mansoni/immunology , Schistosomiasis haematobia/complications , Schistosomiasis haematobia/immunology , Schistosomiasis mansoni/complications , Schistosomiasis mansoni/immunology
7.
Am J Clin Oncol ; 21(2): 177-9, 1998 Apr.
Article in English | MEDLINE | ID: mdl-9537207

ABSTRACT

In patients who have esophageal cancer with a tracheoesophageal fistula, chemotherapy and radiotherapy are usually contraindicated because it is thought to enlarge the fistula. The records of 50 patients who had esophageal cancer and received simultaneous chemotherapy and radiotherapy from January 1992 to January 1997 were evaluated in the Medical Oncology Section of the Veterans Administration Medical Center, Washington, D.C. All patients were staged radiographically and endoscopically. Four patients developed a tracheoesophageal fistula while receiving treatment. One patient developed a fistula before treatment and another patient developed a fistula after treatment. Closure of the tracheoesophageal fistulas was achieved in 4 of 5 patients who responded to therapy and in those who developed fistulas before or during therapy. One of the patients whose fistula did not close died during therapy, whereas the other who developed a fistula after therapy underwent stenting. This finding indicates that development of a tracheoesophageal fistula is not a contraindication to chemotherapy and radiotherapy, and patients who are responsive to therapy may have closure of their fistulas.


Subject(s)
Esophageal Neoplasms/complications , Esophageal Neoplasms/therapy , Tracheoesophageal Fistula/etiology , Tracheoesophageal Fistula/therapy , Adult , Aged , Antineoplastic Agents/therapeutic use , Esophageal Neoplasms/drug therapy , Esophageal Neoplasms/radiotherapy , Humans , Middle Aged , Tracheoesophageal Fistula/drug therapy , Tracheoesophageal Fistula/radiotherapy
8.
Int J Clin Pract ; 51(7): 468-70, 1997 Oct.
Article in English | MEDLINE | ID: mdl-9536589

ABSTRACT

We describe two type 2 diabetic patients with unilateral emphysematous pyelonephritis who responded to medical treatment alone. Escherichia coli was isolated in both patients. The presence of gas was confirmed early by ultrasound and CT scan of abdomen. Following treatment, good functional recovery was demonstrable in the affected kidneys by isotope renogram. We stress the need for early diagnosis of this condition and aggressive treatment with broad spectrum antibiotics.


Subject(s)
Diabetes Complications , Emphysema/etiology , Escherichia coli Infections/complications , Escherichia coli/isolation & purification , Pyelonephritis/etiology , Humans , Male , Middle Aged , Pyelonephritis/diagnosis , Tomography, X-Ray Computed
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