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1.
Cells Tissues Organs ; 210(3): 195-217, 2021.
Article in English | MEDLINE | ID: mdl-34280918

ABSTRACT

Sepsis-associated acute lung injury (ALI) is a critical condition characterized by severe inflammatory response and mitochondrial dysfunction. Coenzyme Q10 (CoQ10) and aescin (AES) are well-known for their anti-inflammatory activities. However, their effects on lipopolysaccharide (LPS)-induced lung injury have not been explored yet. Here, we asked whether combined pretreatment with CoQ10 and AES synergistically prevents LPS-induced lung injury. Fifty male rats were randomized into 5 groups: (1) control; (2) LPS-treated, rats received a single i.p. injection of LPS (8 mg/kg); (3) CoQ10-pretreated, (4) AES-pretreated, or (5) combined-pretreated; animals received CoQ10 (100 mg/kg), AES (5 mg/kg), or both orally for 7 days before LPS injection. Combined CoQ10 and AES pretreatment significantly reduced lung injury markers; 52.42% reduction in serum C-reactive protein (CRP), 53.69% in alkaline phosphatase (ALKP) and 60.26% in lactate dehydrogenase (LDH) activities versus 44.58, 37.38, and 48.6% in CoQ10 and 33.81, 34.43, and 39.29% in AES-pretreated groups, respectively. Meanwhile, combination therapy significantly reduced interleukin (IL)-1ß and tumor necrosis factor (TNF)-α expressions compared to monotherapy (p < 0.05). Additionally, combination therapy prevented LPS-induced histological and mitochondrial abnormalities greater than separate drugs. Western blotting indicated that combination therapy significantly suppressed nucleotide-binding oligomerization domain (NOD)-like receptors-3 (NLRP-3) inflammasome compared to separate drugs (p < 0.05). Further, combination therapy significantly decreased the expression of signaling cascades, p38 mitogen-activated protein kinases (p38 MAPK), nuclear factor kappa B (NF-κB)-p65, and extracellular-regulated kinases 1/2 (ERK1/2) versus monotherapy (p < 0.05). Interestingly, combined pretreatment significantly downregulated high mobility group box-1 (HMGB1) by 72.93%, and toll-like receptor 4 (TLR4) by -0.93-fold versus 61.92%, -0.83-fold in CoQ10 and 38.67%, -0.70-fold in AES pretreatment, respectively. Our results showed for the first time that the enhanced anti-inflammatory effect of combined CoQ10 and AES pretreatment prevented LPS-induced ALI via suppression of NLRP-3 inflammasome through regulation of HMGB1/TLR4 signaling pathway and mitochondrial stabilization.


Subject(s)
Acute Lung Injury , Sepsis , Acute Lung Injury/drug therapy , Acute Lung Injury/etiology , Animals , Escin , Lipopolysaccharides , Male , NF-kappa B , Rats , Sepsis/complications , Sepsis/drug therapy , Ubiquinone/analogs & derivatives
2.
Int J Occup Environ Health ; 24(1-2): 55-60, 2018.
Article in English | MEDLINE | ID: mdl-30222073

ABSTRACT

Background Occupational hazards are the leading cause of morbidity and mortality among abattoirs personnel and animal workers. These hazards result from direct or indirect exposure to potential infection and several distressing events during routine procedures. Objectives To serologically investigate the potential occupational brucellosis hazard at Egyptian abattoirs. To provide an insight on the needed biosafety practices that should be implemented to mitigate the spread of occupational brucellosis among abattoir workers. Methods Two hundred and thirty (n = 230) blood samples were collected from animals in two Egyptian abattoirs. The rose Bengal test was used to evaluate the seroprevalence of Brucella in abattoir animals. A questionnaire was distributed among abattoir personnel to address biosafety gaps and deficiencies as a cause of occupational brucellosis. Results The overall seroprevalence of Brucella using the rose Bengal test was 75.2% in the two targeted abattoirs. It was obvious that there are gaps of malpractices and inconvenient behavior among individuals of the targeted community. Conclusions The current findings reveal the missing role of concerned authorities and lack of written safety policy. The data highlights the need for further research, including isolation and characterization of the causative agents, and reliable epidemiological studies.


Subject(s)
Abattoirs , Brucellosis/epidemiology , Occupational Exposure , Organizational Culture , Safety Management/organization & administration , Animals , Brucellosis/blood , Brucellosis/veterinary , Cattle , Egypt , Humans , Male , Occupational Diseases , Occupational Exposure/prevention & control , Personal Protective Equipment , Risk Factors , Seroepidemiologic Studies , Surveys and Questionnaires
3.
Libyan J Med ; 9(1): 25497, 2014.
Article in English | MEDLINE | ID: mdl-25216211

ABSTRACT

INTRODUCTION: Aeromonads of medical importance have been reported from numerous clinical, food, and water sources, but identification of genospecies and virulence factors of Aeromonas species from countries in North Africa and the Middle East are few. METHODS: In total 99 Aeromonas species isolates from different sources (diarrheal children [n=23], non-diarrheal children [n=16], untreated drinking water from wells [n=32], and chicken carcasses [n=28]) in Tripoli, Libya, were included in the present investigation. Genus identification was confirmed by biochemical analysis, and genospecies were determined using a combination of 16S rDNA variable region and gyrB sequence analysis. Polymerase chain reaction (PCR) was used to detect genes encoding toxins from 52 of the isolates. RESULTS: We identified 44 isolates (44%) as A. hydrophila (3 [3.0%] subspecies anaerogenes, 23 [23%] subspecies dhakensis, and 18 [18%] subspecies ranae); 27 isolates (27%) as A. veronii; 23 isolates (23%) as A. caviae; and 5 isolates (5.0%) as other genospecies. The genes encoding aerolysin (aer), cytolytic enterotoxin (act), and A. hydrophila isolate SSU enterotoxin (ast) were detected in 45 (87%), 4 (7.7%), and 9 (17%) of the 52 isolates tested, respectively. The gene encoding an extracellular lipase (alt) was not detected. CONCLUSION: The majority of aeromonads from Libya fall within three genospecies (i.e. A. hydrophila, A. veronii, and A. caviae), and genes coding for toxin production are common among them.


Subject(s)
Aeromonas/isolation & purification , Diarrhea/microbiology , Feces/microbiology , Meat/microbiology , Water Microbiology , Aeromonas/pathogenicity , Child , Child, Preschool , DNA, Ribosomal , Diarrhea/epidemiology , Humans , Infant , Libya/epidemiology , Phylogeny , Polymerase Chain Reaction , Virulence Factors
4.
J Trop Pediatr ; 60(5): 397-400, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25122630

ABSTRACT

A total of 220 enteroadherent Escherichia coli were identified from 729 Egyptian children with diarrhea using the HEp-2 adherence assay. Enteropathogenic E.coli (EPEC = 38) was common among children <6 months old and provoked vomiting, while diffuse-adhering E.coli (DAEC = 109) induced diarrheal episodes of short duration, and enteroaggregative E.coli (EAEC = 73) induced mild non-persistent diarrhea. These results suggest that EPEC is associated with infantile diarrhea in Egyptian children.


Subject(s)
Diarrhea, Infantile/epidemiology , Diarrhea, Infantile/microbiology , Enteropathogenic Escherichia coli/isolation & purification , Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Escherichia coli/classification , Child , Child, Preschool , Diarrhea, Infantile/diagnosis , Egypt/epidemiology , Enteropathogenic Escherichia coli/genetics , Enzyme-Linked Immunosorbent Assay , Escherichia coli/isolation & purification , Escherichia coli Infections/diagnosis , Feces/microbiology , Female , Humans , Infant , Male , Phenotype , Prevalence
5.
Pediatr Infect Dis J ; 33 Suppl 1: S62-8, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24343617

ABSTRACT

BACKGROUND: Before the introduction of rotavirus vaccine in Egypt, information on the burden of disease and the circulating rotavirus genotypes is critical to monitor vaccine effectiveness. METHODS: A cohort of 348 Egyptian children was followed from birth to 2 years of age with twice-weekly home visits to detect diarrheal illness. VP7 and VP4 genes were genotyped by reverse-transcription polymerase chain reaction and DNA sequencing. RESULTS: Forty percentage of children had rotavirus-associated diarrhea at least once by their second birthday. One hundred and twelve children experienced a single rotavirus diarrheal episodes (RDE) at a median age of 9 months; while 27 infants had their second RDE at a median age of 15 months and 1 infant had 3 RDE at the age of 2, 16 and 22 months. Of the 169 RDE, 82% could be assigned a G-type, while 58% had been identified a P-type. The most prevalent genotype was G2 (32%), followed by G1 (24%) and G9 (19%). G2P[4] rotavirus episodes were significantly associated with fever (P = 0.03) and vomiting (P = 0.06) when compared with other genotypes. G2 strains were the predominant genotype causing 50% of the second RDE while G9 represented 25% of the second RDE. CONCLUSIONS: Genotypes identified are similar to those detected globally except for absence of G4. Our finding that 75% of the second RDE were due to G2 and G9 indicates a possible reduction in natural protection afforded by these types compared with G1, where 90% of G1 cases did not experience a second xposure, indicating greater protection against recurrent symptomatic infection.


Subject(s)
Diarrhea/virology , Rotavirus Infections/virology , Rotavirus/genetics , Cohort Studies , Diarrhea/epidemiology , Egypt/epidemiology , Feces/virology , Humans , Infant , Rotavirus Infections/epidemiology , Seasons
6.
Ann Clin Microbiol Antimicrob ; 12: 16, 2013 Jul 18.
Article in English | MEDLINE | ID: mdl-23866018

ABSTRACT

BACKGROUND: Klebsiella pneumoniae outbreaks possessing extended-spectrum ß-lactamase- (ESBL) mediated resistance to third-generation cephalosporins have increased significantly in hospital and community settings worldwide. The study objective was to characterize prevalent genetic determinants of TEM, SHV and CTX-M types ESBL activity in K. pneumoniae isolates from Egypt. METHODS: Sixty five ESBL-producing K. pneumoniae strains, isolated from nosocomial and community-acquired infections from 10 Egyptian University hospitals (2000-2003), were confirmed with double disc-synergy method and E-test. blaTEM, blaSHV and blaCTX-m genes were identified by PCR and DNA sequencing. Pulsed-field gel electrophoresis (PFGE) was conducted for genotyping. RESULTS: All isolates displayed ceftazidime and cefotaxime resistance. blaTEM and blaSHV genes were detected in 98% of the isolates' genomes, while 11% carried blaCTX-m. DNA sequencing revealed plasmid-borne SHV-12,-5,-2a (17%), CTX-m-15 (11%), and TEM-1 (10%) prevalence. Among SHV-12 (n=8), one isolate displayed 100% blaSHV-12 amino acid identity, while others had various point mutations: T17G (Leu to Arg, position 6 of the enzyme: n=2); A8T and A10G (Tyr and Ile to Phe and Val, positions 3 and 4, respectively: n=4), and; A703G (Lys to Glu 235: n=1). SHV-5 and SHV-2a variants were identified in three isolates: T17G (n=1); A703G and G705A (Ser and Lys to Gly and Glu: n=1); multiple mutations at A8T, A10G, T17G, A703G and G705A (n=1). Remarkably, 57% of community-acquired isolates carried CTX-m-15. PFGE demonstrated four distinct genetic clusters, grouping strains of different genetic backgrounds. CONCLUSIONS: This is the first study demonstrating the occurrence of SHV-12, SHV-5 and SHV-2a variants in Egypt, indicating the spread of class A ESBL in K. pneumoniae through different mechanisms.


Subject(s)
Drug Resistance, Multiple, Bacterial/genetics , Klebsiella Infections/microbiology , Klebsiella pneumoniae/isolation & purification , beta-Lactamases/genetics , Anti-Bacterial Agents/pharmacology , Bacterial Typing Techniques , Base Sequence , Community-Acquired Infections/microbiology , Cross Infection/microbiology , DNA, Bacterial/analysis , Egypt/epidemiology , Genetic Variation , Humans , Klebsiella Infections/drug therapy , Klebsiella Infections/epidemiology , Klebsiella pneumoniae/enzymology , Klebsiella pneumoniae/genetics , Sequence Analysis, DNA
7.
Ann Clin Microbiol Antimicrob ; 12: 9, 2013 May 02.
Article in English | MEDLINE | ID: mdl-23638855

ABSTRACT

BACKGROUND: Shigella flexneri serotype 1c emerged as a critical isolate from children in Egypt and Pakistan. The pattern of antimicrobial susceptibility (AMS) and resistance genes of this serotype have yet to be characterized. FINDINGS: Sixty nine S. flexneri 1c isolates isolates were identified from both Egypt (n-46) and Pakistan (n = 23) and tested for AMS by disk diffusion method and minimal inhibitory concentrations were also determined. Isolates were genotyped by pulsed field gel electrophoresis (PFGE) and five relevant resistance genes (bla(TEM), bla(SHV), bla(OXA), sulI and sulII) were detected by polymerase chain reaction (PCR) and confirmed by DNA sequencing. High resistance was observed in all isolates for ampicillin (AM >96%); trimethoprim-sulphamethoxazole and tetracycline (>88%). Most AM-resistant isolates from Egypt (70%) harbored bla(TEM) resistance, while 52% of isolates from Pakistan expressed bla(OXA). All isolates were closely related by PFGE, irrespective of source or time of collection. The sulII gene was present in 100% of isolates from pediatric cases in Egypt, 65% of Pakistan isolates, and 53% of isolates from older Egyptian patients. CONCLUSIONS: While different Shigella serotypes gathered in specific genotypic groups, 1c serotype isolates formed multiple clusters. Although AMS was considerably high to most commonly used drugs, genetic determinants were variable between countries over time. The data stress the need for a more careful selection of antibiotics in the treatment of shigellosis.


Subject(s)
Anti-Bacterial Agents/pharmacology , Drug Resistance, Multiple, Bacterial , Shigella flexneri/isolation & purification , Adolescent , Ampicillin/pharmacology , Bacterial Proteins/genetics , Bacterial Typing Techniques , Carrier Proteins/genetics , Child , Child, Preschool , Disk Diffusion Antimicrobial Tests , Dysentery, Bacillary/diagnosis , Egypt , Genes, Bacterial , Humans , Pakistan , Shigella flexneri/classification , Shigella flexneri/drug effects , Shigella flexneri/genetics , Trimethoprim/pharmacology , Young Adult , beta-Lactamases/genetics
8.
Am J Trop Med Hyg ; 87(2): 312-8, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22855764

ABSTRACT

We conducted clinic-based, influenza-like illness and diarrheal disease surveillance among U.S. service members participating in Operation Bright Star 2009. Epidemiologic data and samples were collected. Nasopharyngeal swab specimens were tested for viruses, and feces was tested for microbiologic, immunologic, and molecular diagnostics. A survey was used to collect self-reported data. From 1,529 surveys, 41% reported diarrheal disease and 25% reported respiratory illness (incidence rate = 62 of 100 versus 37 of 100 person-months; incidence rate ratio = 1.7, 95% confidence interval = 1.5-1.9). Enterotoxigenic Escherichia coli was identified in 74% (69 of 93) of fecal samples. In the influenza-like illness case series, 17% (9 of 52) were positive for influenza A; all were positive for pandemic (pH1N1) 2009 virus. Rates of decreased work performance reported by patients with diarrhea and influenza-like illness were similar (46% versus 48%; P = 0.8). Diarrheal diseases and respiratory illness remain common among deployed military personnel, with important operational impact. Despite an ongoing influenza pandemic, diarrheal disease incidence was higher than that of respiratory illness.


Subject(s)
Diarrhea/epidemiology , Disease Outbreaks , Military Personnel , Respiratory Tract Diseases/epidemiology , Adult , Egypt/epidemiology , Feces/microbiology , Feces/parasitology , Female , Humans , Incidence , Influenza A virus/genetics , Male , Poisson Distribution , RNA, Viral/chemistry , RNA, Viral/genetics , Real-Time Polymerase Chain Reaction , United States/ethnology
9.
PLoS One ; 7(5): e35791, 2012.
Article in English | MEDLINE | ID: mdl-22606235

ABSTRACT

The present study demonstrates that multiple NoV genotypes belonging to genogroup II contributed to an acute gastroenteritis outbreak at a US military facility in Turkey that was associated with significant negative operational impact. Norovirus (NoV) is an important pathogen associated with acute gastroenteritis among military populations. We describe the genotypes of NoV outbreak occurred at a United States military facility in Turkey. Stool samples were collected from 37 out of 97 patients presenting to the clinic on base with acute gastroenteritis and evaluated for bacterial and viral pathogens. NoV genogroup II (GII) was identified by RT-PCR in 43% (16/37) stool samples. Phylogenetic analysis of a 260 base pair fragment of the NoV capsid gene from ten stool samples indicated the circulation of multiple and rare genotypes of GII NoV during the outbreak. We detected four GII.8 isolates, three GII.15, two GII.9 and a sole GII.10 NoV. Viral sequences could be grouped into four clusters, three of which have not been previously reported in Turkey. The fact that current NoV outbreak was caused by rare genotypes highlights the importance of norovirus strain typing. While NoV genogroup II is recognized as causative agent of outbreak, circulation of current genotypes has been rarely observed in large number of outbreaks.


Subject(s)
Caliciviridae Infections/virology , Gastroenteritis/virology , Norovirus , Adult , Caliciviridae Infections/epidemiology , Capsid Proteins/genetics , Disease Outbreaks , Female , Gastroenteritis/epidemiology , Genes, Viral , Genotype , Humans , Male , Military Personnel , Norovirus/classification , Norovirus/genetics , Norovirus/isolation & purification , Phylogeny , Turkey/epidemiology , United States/ethnology , Young Adult
10.
Trans R Soc Trop Med Hyg ; 106(5): 309-14, 2012 May.
Article in English | MEDLINE | ID: mdl-22405492

ABSTRACT

To characterize Neisseria meningitidis isolates collected from cerebrospinal fluid of meningitis cases in Egypt (1998-2003) as part of surveillance studies, 67 isolates were serogrouped, tested for antibiotic sensitivity and analyzed using multilocus sequence typing (MLST). Results show that isolates expressing serogroup B (50.7%) and serogroup A (34.3%) antigens were predominant in Egypt during the surveillance period, possibly due to suppression of other serogroups by meningococcal vaccines in current use. Intermediate resistance to penicillin was observed in 71% of the isolates, suggesting a need for physicians to shift to third-generation cephalosporins during the empirical treatment of infection. Recurrent lineages of N. meningitidis in Egypt appear to originate from Europe and other Middle Eastern countries. Of 19 sequence types detected, five were unique to Africa and 10 were not observed previously in the MLST database. The information obtained illustrates the changing dynamics of meningitis after vaccine introduction in Egypt.


Subject(s)
DNA, Bacterial/analysis , Meningitis, Meningococcal/genetics , Meningococcal Infections/genetics , Meningococcal Vaccines/pharmacology , Multilocus Sequence Typing , Neisseria meningitidis/genetics , Egypt/epidemiology , Female , Genetic Variation , Humans , Male , Meningitis, Meningococcal/cerebrospinal fluid , Meningitis, Meningococcal/drug therapy , Meningitis, Meningococcal/epidemiology , Meningococcal Infections/cerebrospinal fluid , Meningococcal Infections/drug therapy , Meningococcal Infections/epidemiology , Molecular Epidemiology , Multilocus Sequence Typing/methods , Neisseria meningitidis/isolation & purification , Sequence Analysis, DNA
12.
World J Hepatol ; 3(6): 147-56, 2011 Jun 27.
Article in English | MEDLINE | ID: mdl-21860674

ABSTRACT

AIM: To evaluate the impact of mass vaccination against the hepatitis B virus (HBV) in Egypt, and to search for vaccinee asymptomatic breakthrough HBV infection and its genotype. METHODS: Seven hundred serum samples from vaccinated children and adults (aged 2-47 years) were used for quantitative and qualitative detection of HBsAb by ELISA. Three hundred and sixty serum samples representing undetectable or low or high HBsAb were screened for markers of active HBV infection (HBsAg, HBcAb (IgG) and HBeAb by ELISA, plus HBsAg by AxSYM) and HBV-DNA genotyping by nested multiplex PCR and by DNA sequencing. RESULTS: It was found that 65% of children aged 2-4 years, and 20.5% aged 4-13 years, as well as 45% adults were good responders to HBV vaccination mounting protective level HBsAb. Poor responders were 28%, 59.5% and 34%, and non-responders were 7%, 20% and 21% respectively, in the three studied groups. Markers of asymptomatic HBV infections were HBsAg detected by ELISA in 2.5% vs 11.39% by AxSYM. Other markers were HBcAb (IgG) in 1.38%, HBeAb in 0.83%, and HBV-DNA in 7.8%. All had HBV genotype E infection. CONCLUSION: It is concluded that HBV vaccine is efficient in controlling HBV infection among children and adults. The vaccine breakthrough infection was by HBV genotype E. A booster dose of vaccine is recommended, probably four years after initial vaccination.

13.
Am J Trop Med Hyg ; 84(1): 59-64, 2011 Jan.
Article in English | MEDLINE | ID: mdl-21212203

ABSTRACT

To better understand the epidemiology of diarrhea in deployed personnel to the Middle East, a prospective cohort study of travelers' diarrhea (TD) was conducted between May 2004 and January 2005 at the Multinational Force and Observers (MFO) camp in the southern Sinai. A baseline entry questionnaire and stool specimen was provided on study entry, and volunteers were followed every 6 weeks. Of 211 volunteers, 145 (68.7%) completed one or more follow-up visits. In total, 416 follow-up surveys were completed, which described an overall incidence of 25.2 episodes per 100 person months (95% confidence interval = 21.2-30.0). Additionally, stools were collected in 72 of 77 diarrhea-associated clinic visits, with bacterial pathogens most commonly isolated (enterotoxigenic Escherichia coli in 30 [42%] samples and Campylobacter jejuni in 7 [10%] samples) Despite modern preventive methods, diarrhea is still a common problem for deployed US military personnel in Egypt, frequently resulting in diminished ability to work.


Subject(s)
Diarrhea/diagnosis , Diarrhea/epidemiology , Military Personnel , Adult , Cohort Studies , Egypt/epidemiology , Feces/microbiology , Feces/parasitology , Humans , Incidence , Male , Middle Aged , Travel , United States , Young Adult
14.
J Infect Dev Ctries ; 4(9): 546-54, 2010 Oct 04.
Article in English | MEDLINE | ID: mdl-21045366

ABSTRACT

INTRODUCTION: Campylobacter spp are the major cause of enteritis in humans and more than 90% of reported infections are caused by Campylobacter jejuni. Fluoroquinolones such as ciprofloxacin are the antibiotics of choice for treatment. An increase in the frequency of ciprofloxacin-resistant Campylobacter has been reported globally due to a single base mutation (C-257 to T) in codon 86 of the quinolone resistance determining region (QRDR) of the gyrA gene altering the amino acid sequence from threonine at position 86 to isoleucine (Thr-86 to Ile). METHODOLOGY: Campylobacter spp (n = 118) were selected from a collection of Egyptian isolates spanning 1998 to 2005. The presence of C. jejuni gyrA gene was confirmed in each isolate by a PCR assay amplifying 368 bp portion of the gyrA gene. C to T alteration was detected by the mismatch amplification mutation assay MAMA PCR. The MIC of nalidixic acid (NA) and ciprofloxacin (CIP) was determined by E-test. RESULTS: C. jejuni gyrA gene was detected in 100 of the Campylobacter spp studied; the other 18 isolates were found to be Campylobacter coli by lpxA PCR. The mutation was detected in 89 C. jejuni resistant isolates with MIC values (NA; 8 - >256 µg/ml) and (CIP; 4 - >32 µg/ml). The other 11 sensitive C. jejuni isolates with MIC values (NA; 0.38 - 3 µg/ml) and (CIP; 0.03 - 0.125 µg/ml) were not amplified by the MAMA primers. There was 100% congruence with MAMA PCR, MIC results and gyrA gene sequence analysis. CONCLUSIONS: In Egypt the main mechanism for resistance to fluoroquinolones is an alteration in the gyrA QRDR. MAMA PCR provides an economical and rapid means for screening fluoroquinolone resistance.


Subject(s)
Campylobacter Infections/microbiology , Campylobacter jejuni/genetics , DNA Gyrase/genetics , Drug Resistance, Bacterial , Mutation, Missense , Polymerase Chain Reaction/methods , Anti-Bacterial Agents/pharmacology , Campylobacter jejuni/isolation & purification , Child, Preschool , Egypt , Humans , Infant , Infant, Newborn , Microbial Sensitivity Tests , Quinolones/pharmacology
15.
J Infect Dev Ctries ; 3(10): 753-61, 2009 Dec 15.
Article in English | MEDLINE | ID: mdl-20009276

ABSTRACT

Typhoid fever is endemic in the Mediterranean North African countries (Morocco, Algeria, Tunisia, Libya, and Egypt) with an estimated incidence of 10-100 cases per 100,000 persons. Outbreaks caused by Salmonella enterica serovar Typhi are common and mainly due to the consumption of untreated or sewage-contaminated water. Salmonella enterica Paratyphi B is more commonly involved in nosocomial cases of enteric fever in North Africa than expected and leads to high mortality rates among infants with congenital anomalies. Prevalence among travellers returning from this region is low, with an estimate of less than one per 100,000. Although multidrug resistant strains of Salmonella Typhi and Paratyphi are prevalent in this region, the re-emergence of chloramphenicol- and ampicillin-susceptible strains has been observed. In order to better understand the epidemiology of enteric fever in the Mediterranean North African region, population-based studies are needed. These will assist the health authorities in the region in preventing and controlling this important disease.


Subject(s)
Typhoid Fever/epidemiology , Africa, Northern/epidemiology , Anti-Bacterial Agents/therapeutic use , Congenital Abnormalities , Cross Infection/epidemiology , Cross Infection/etiology , Cross Infection/therapy , Drug Resistance, Multiple, Bacterial , Humans , Salmonella enterica/physiology , Travel , Typhoid Fever/etiology , Typhoid Fever/therapy , Typhoid-Paratyphoid Vaccines/therapeutic use
16.
J Med Microbiol ; 58(Pt 8): 1006-1014, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19528169

ABSTRACT

Urinary tract infections (UTIs) in patients with diabetes mellitus (DM) are reported mainly from developed countries. In addition to this underreporting from developing countries, there is a lack of information pertaining to the virulence factors (VFs) and phylogenetic grouping of uropathogenic Escherichia coli (UPEC) from DM and non-DM patients in developing countries. Between July 2005 and June 2006, urine specimens were collected from 135 DM and 164 non-DM patients, all with clinically diagnosed UTIs, attending Elkhadra Hospital and the Diabetic Center in Tripoli, Libya. Specimens were examined for different uropathogens using standard microbiological procedures. Isolated uropathogens were tested for their susceptibility to antimicrobial agents by a disc diffusion method. In addition, UPEC was grouped phylogenetically by PCR and subsequently tested for 19 VFs. Uropathogens were isolated from 77 (57 %) of the DM group and from 110 (67 %) of the non-DM group (P >0.05). E. coli was isolated from 18 (13 %) and 29 (18 %), Klebsiella species from 18 (13 %) and 23 (14 %), and Staphylococcus aureus from 12 (9 %) and 12 (7 %) of the DM and non-DM groups, respectively (P >0.05). Age, gender, education level and marital status had no significant influence on the isolation rates of different organisms from the DM group compared with the non-DM group. With very few exceptions, no differences were observed in the antimicrobial resistance profiles of uropathogens from the DM and non-DM patients. In addition, UPEC from the DM patients was significantly less virulent and was associated with phylogenetic group A, whilst UPEC from the non-DM patients was significantly more virulent and was associated with group D. The results of our surveillance of UTI infections in DM patients agree, in general, with observations reported previously from several developed countries.


Subject(s)
Diabetes Mellitus/microbiology , Escherichia coli/genetics , Phylogeny , Urinary Tract Infections/microbiology , Virulence Factors/metabolism , Adolescent , Adult , Aged , Child , Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Escherichia coli Proteins/genetics , Escherichia coli Proteins/metabolism , Female , Genes, Bacterial , Humans , Libya/epidemiology , Male , Middle Aged , Urinary Tract Infections/epidemiology , Virulence Factors/genetics , Young Adult
17.
J Infect Dev Ctries ; 2(2): 81-98, 2008 Apr 01.
Article in English | MEDLINE | ID: mdl-19738331

ABSTRACT

Although their role in gastroenteritis is controversial, Aeromonas species are recognized as etiological agents of a wide spectrum of diseases in man and animals. In developing countries, potentially pathogenic Aeromonas sp. are very common in drinking water and in different types of foods, particularly seafood. Several food-borne and water-borne outbreaks as well nosocomial outbreaks associated with aeromonads have been reported. Significant association of Aeromonas sp. with diarrhoea in children has been reported from several countries. These organisms are important causes of skin and soft-tissue infections and aspiration pneumonia following contact with water and after floods. High incidence of antimicrobial resistance, including to third-generation cephalosporins and the fluoroquinolones, is found among Aeromonas sp. isolated from clinical sources in some developing countries in Asia. Isolating and identifying Aeromonas sp. to genus level is simple and requires resources that are available in most microbiology laboratories for processing common enteric bacteria. The present review will cover the epidemiology, clinical syndromes, low-cost diagnostic methods, and antimicrobial resistance and treatment of Aeromonas infections in developing countries.


Subject(s)
Aeromonas/isolation & purification , Developing Countries/statistics & numerical data , Gram-Negative Bacterial Infections/epidemiology , Aeromonas/classification , Animals , Dysentery/epidemiology , Dysentery/microbiology , Gram-Negative Bacterial Infections/diagnosis , Humans , Incidence , Water Microbiology
18.
Am J Trop Med Hyg ; 74(1): 148-53, 2006 Jan.
Article in English | MEDLINE | ID: mdl-16407360

ABSTRACT

To identify enteropathogens for vaccine development, we implemented clinic-based surveillance for severe pediatric diarrhea in Egypt's Nile River Delta. Over 2 years, a physician clinically evaluated and obtained stool samples for microbiology from patients with diarrhea and less than 6 years of age. In the first (N = 714) and second clinic (N = 561), respectively, 36% (N = 254) and 46% (N = 260) of children were infected with rotavirus, enterotoxigenic Escherichia coli (ETEC), Campylobacter, or Shigella. When excluding mixed rotavirus-bacterial infections, for the first and second clinic, 23% and 10% had rotavirus-associated diarrhea, and 14% and 17% had ETEC-associated diarrhea, respectively. Campylobacter-associated diarrhea was 1% and 3%, and Shigella-associated diarrhea was 2% and 1%, respectively, for the two clinics. Rotavirus-associated diarrhea peaked in late summer to early winter, while bacterial agents were prevalent during summer. Rotavirus-associated cases presented with dehydration, vomiting, and were often hospitalized. Children with Shigella- or Campylobacter-associated diarrhea reported as watery diarrhea and rarely dysentery. ETEC did not have any clinically distinct characteristics. For vaccine development and/or deployment, our study suggests that rotavirus is of principle concern, followed by ETEC, Shigella, and Campylobacter.


Subject(s)
Bacterial Infections/epidemiology , Diarrhea/microbiology , Diarrhea/virology , Population Surveillance , Rotavirus Infections/epidemiology , Bacterial Infections/microbiology , Child, Preschool , Diarrhea/epidemiology , Egypt/epidemiology , Female , Humans , Infant , Infant, Newborn , Male , Seasons
19.
J Trop Pediatr ; 51(3): 154-9, 2005 Jun.
Article in English | MEDLINE | ID: mdl-15831665

ABSTRACT

Over a 2-year period, the prevalence and clinical characteristics of Cryptosporidium-associated diarrhea in the Nile River Delta of Egypt was studied. A stool sample was obtained from children with diarrhea attending one of two study hospitals and of the 1275 children evaluated, 214 (17%) were found to be infected with Cryptosporidium. Younger age was a risk factor for developing Cryptosporidium-associated diarrhea. Children <12 months of age were 2.4 times more likely to be infected with Cryptosporidium (p<0.01) and children 12 to 23 months were 1.9 (p<0.05) times more likely to be infected with the organism as compared to older children. Breastfeeding had a trend towards protection against Cryptosporidium-associated diarrhea (p=0.07). Clinical findings associated with Cryptosporidium diarrhea included vomiting, persistent diarrhea and the need for hospitalization. Our data suggest that Cryptosporidium is common in Egyptian children and may be associated with severe diarrhea.


Subject(s)
Cryptosporidiosis/epidemiology , Cryptosporidium parvum/isolation & purification , Diarrhea/epidemiology , Diarrhea/parasitology , Age Distribution , Animals , Child, Preschool , Cohort Studies , Cryptosporidiosis/diagnosis , Egypt/epidemiology , Feces/parasitology , Female , Humans , Incidence , Infant , Infant, Newborn , Logistic Models , Male , Multivariate Analysis , Probability , Prognosis , Retrospective Studies , Risk Assessment , Severity of Illness Index , Sex Distribution
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