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1.
J Mol Evol ; 89(8): 527-543, 2021 10.
Article in English | MEDLINE | ID: mdl-34274981

ABSTRACT

Knowledge on the evolution of antioxidant systems in cyanobacteria is crucial for elucidating the cause and consequence of the rise of atmospheric oxygen in the Earth's history. In this study, to elucidate the origin and evolution of cyanobacterial antioxidant enzymes, we analyzed the occurrence of genes encoding four types of superoxide dismutases and three types of catalases in 85 complete cyanobacterial genomes, followed by phylogenetic analyses. We found that Fe superoxide dismutase (FeSOD), Mn superoxide dismutase (MnSOD), and Mn catalase (MnCat) are widely distributed among modern cyanobacteria, whereas CuZn superoxide dismutase (CuZnSOD), bifunctional catalase (KatG), and monofunctional catalase (KatE) are less common. Ni superoxide dismutase (NiSOD) is distributed among marine Prochlorococcus and Synechococcus species. Phylogenetic analyses suggested that bacterial MnSOD evolved from cambialistic Fe/MnSOD before the diversification of major bacterial lineages. The analyses suggested that FeSOD evolved from MnSOD before the origin of cyanobacteria. MnCat also evolved in the early stages of bacterial evolution, predating the emergence of cyanobacteria. KatG, KatE, and NiSOD appeared 2.3-2.5 billion years ago. Thus, almost all cyanobacterial antioxidant enzymes emerged before or during the rise of atmospheric oxygen. The loss and appearance of these enzymes in marine cyanobacteria may be also related to the change in the metal concentration induced by the increased oxygen concentration in the ocean.


Subject(s)
Antioxidants , Cyanobacteria , Catalase/genetics , Cyanobacteria/genetics , Oxygen , Phylogeny , Superoxide Dismutase/genetics
2.
Brain Res ; 1691: 94-104, 2018 07 15.
Article in English | MEDLINE | ID: mdl-29702083

ABSTRACT

Vitronectin (VN), one of the extracellular matrix proteins, controls the maturation of cerebellar granule cells (CGCs) through the promotion of the initial differentiation stage progress. However, the receptors of VN in the initial differentiation stage of CGC precursors (CGCPs) have not been clarified. In this study, we characterized the receptor candidates for VN in CGCPs. First, we confirmed that αvß3 and αvß5 integrins, which are receptor candidates for VN, were co-localized with VN in the developing cerebellum and primary cultured CGCPs. Next, the knockdown (KD) of αv, ß3, and ß5 integrins with small interference RNA (siRNA) for each integrin reduced the ratio of Tuj1, a final differentiation marker, -positive CGCPs. We further studied whether αvß3 and αvß5 integrins control the initial differentiation stage. The KD of αv and ß5, but not ß3, integrins significantly increased the ratio of transient axonal glycoprotein 1 (TAG1), an initial differentiation marker, -positive CGCPs, whereas the KD of αv and ß3 integrins, not ß5 integrin, stimulated the proliferation of CGCPs. Overexpression of ß5 integrin stimulated the progress of the initial differentiation stage as well. To confirm the interaction between αvß5 integrin and VN, VN was added to ß5 integrin-KD CGCPs. The promotion of the progress of initial differentiation by VN was abrogated by ß5 integrin KD using small hairpin RNA (shRNA). Taken together, our results indicated that αvß5 integrin, as the very receptor of VN, is responsible for the progress of the initial differentiation stage in mouse CGCPs.


Subject(s)
Cerebellum/cytology , Gene Expression Regulation, Developmental/physiology , Neural Stem Cells/physiology , Receptors, Vitronectin/genetics , Receptors, Vitronectin/metabolism , Age Factors , Animals , Animals, Newborn , Cell Differentiation/genetics , Cell Proliferation/genetics , Cells, Cultured , Cerebellum/growth & development , Contactin 2/metabolism , Integrin alphaVbeta3/genetics , Integrin alphaVbeta3/metabolism , Ki-67 Antigen/metabolism , Mice , Mice, Inbred ICR , Organ Culture Techniques , Phosphopyruvate Hydratase/metabolism , RNA, Small Interfering/genetics , RNA, Small Interfering/metabolism , Tubulin/metabolism , Vitronectin/metabolism
3.
Mol Cell Neurosci ; 70: 76-85, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26640242

ABSTRACT

Vitronectin (VN), which is an extracellular matrix protein, is known to be involved in the proliferation and differentiation of primary cultured cerebellar granule cell precursors (CGCPs); however, the effect of VN is not fully understood. In this study, we analyzed the effects of VN loss on the proliferation and differentiation of CGCPs in VN knockout (VNKO) mice in vivo. First, immunohistochemistry showed that VN was distributed in the region from the inner external granule layer (iEGL) through the internal granule layer (IGL) in wild-type (WT) mice. Next, we observed the formation of the cerebellar cortex using sagittal sections of VNKO mice at postnatal days (P) 5, 8 and 11. Loss of VN suppressed the ratio of NeuN, a neuronal differentiation marker, to positive cerebellar granule cells (CGCs) in the external granule layer (EGL) and the ratio of CGCs in the IGL at P8, indicating that the loss of VN suppresses the differentiation into CGCs. However, the loss of VN did not significantly affect the proliferation of CGCPs. Next, the effect of VN loss on the initial differentiation stage of CGCPs was examined. The loss of VN increased the expression levels of Transient axonal glycoprotein 1 (TAG1), a marker of neurons in the initial differentiation stage, in the cerebella of VNKO mice at P5 and 8 and increased the ratio of TAG1-positive cells in the primary culture of VNKO-derived CGCPs, indicating that the loss of VN accumulates the CGCPs in the initial differentiation stage. Taken together, these results demonstrate that VN promotes the progress of the initial differentiation stage of CGCPs.


Subject(s)
Cell Differentiation/physiology , Cerebellum/metabolism , Neurons/metabolism , Vitronectin/metabolism , Animals , Cell Proliferation/physiology , Cerebellum/cytology , Contactin 2/genetics , Contactin 2/metabolism , DNA-Binding Proteins , Mice , Mice, Knockout , Nerve Tissue Proteins/genetics , Nerve Tissue Proteins/metabolism , Neurons/cytology , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Vitronectin/genetics
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