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Mikrobiol Z ; 64(4): 39-49, 2002.
Article in Ukrainian | MEDLINE | ID: mdl-12436870

ABSTRACT

Computer analysis of listeria genome isolates of sequences from EMBL, GenBank, DDBJ data bases has been made. Variable and highly conservative (homology degree is 90-100% for all known isolates) genes loci iap and listeriolysin (cytolysin) gene locuses have been determined. Primer sets for detection and differentiation of Listeria species by polymerase chain reaction (PCR) were designed by computer and following thermodynamic analysis. Primer sets can provide detection of Listeria monocytogenes, L. ivanovii, L. seeligeri, L. grayi, L. innocua, L. welshimeri and detection of only pathogenic L. monocytogenes and Listeria species with listeriolysin (cytolysin) gene. Differentiation of 6 Listeria species can be done by means of two primer sets for iap and listeriolysin genes. Amplified fragments of listeria species DNA have different amplicon size. Primers melting temperatures selection allows one to carry out listeria species typing by multiplex PCR in a single tube.


Subject(s)
Bacterial Toxins , DNA Primers , Genome, Bacterial , Listeria/genetics , Bacterial Proteins/genetics , Base Sequence , Genes, Intracisternal A-Particle , Genotype , Heat-Shock Proteins/genetics , Hemolysin Proteins , Listeria/chemistry , Listeria/isolation & purification , Molecular Sequence Data , Polymerase Chain Reaction/methods , Sequence Alignment , Sequence Homology
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