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1.
J Med Virol ; 80(2): 365-71, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18098140

ABSTRACT

As a consequence of the high prevalence of TorqueTeno virus (TTV) in blood donors, thalassemia patients frequently acquire various genotypes of this virus through therapeutic blood transfusions. At present, the clinical consequences of TTV infection remain indeterminate for these patients. Here, several hundred thalassemia patients were tested for the presence of TTV and its genotypes using a combination of PCR and clone-based DNA sequencing. Approximately 10% (12/118) of the patients aged 2-20 years remained negative for TTV including eight genotypes of SENV. Ferritin, aspartate-aminotransferase (AST) and alanine-aminotransferase (ALT) levels were invariably lower in TTV-negative patients (P = 0.02, <0.01, and 0.06, respectively) than in TTV-positive patients. Patients with TTV-HCV co-infection showed elevated ferritin and ALT levels compared with patients with TTV infection alone (P < 0.02 and P < 0.01). AST and ALT levels were within the normal range for all TTV-negative patients, whereas abnormal levels of AST and ALT were seen in a significant proportion of TTV-positive patients (30.7% and 33.6%, respectively) and patients with TTV-HCV co-infections (70.0% and 56.6%, respectively). Only TTV-positive patients (28.0%) and patients with TTV-HCV co-infections (36.3%) had hyper-ferritin levels (> or =3,000 ng/ml). The genotype(s) of TTV responsible for the liver dysfunction could not be determined. However, high levels of AST and ALT were found to be correlated with detection of a higher number of TTV genotypes in the patients. The data suggests that frequent and persistent TTV infection through blood transfusion is associated with hepatic dysfunction and/or damage in transfusion dependent thalassemia patients.


Subject(s)
DNA Virus Infections/virology , Thalassemia/complications , Torque teno virus/isolation & purification , Transfusion Reaction , Adolescent , Adult , Alanine Transaminase/blood , Aspartate Aminotransferases/blood , Child , Child, Preschool , DNA, Viral/chemistry , DNA, Viral/genetics , Female , Ferritins/blood , Humans , Liver/physiopathology , Male , Middle Aged , Polymerase Chain Reaction , Sequence Analysis, DNA , Thalassemia/therapy , Torque teno virus/classification , Torque teno virus/genetics
2.
J Med Virol ; 79(2): 188-91, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17177296

ABSTRACT

Torque Teno Virus (TTV) species-cross infection has been documented. However, the genetic relationship between human and animal TTV remains uncertain. In this study, genotypic characterization of TTV in different Camel specimens from the United Arab Emirates (UAE) was undertaken for comparison with human UAE TTV. A total of 56 specimens: 34 sera, 14 raw, and 8 pasteurized milk samples were tested for TTV. The results showed that the rate of infection was, 38.2% (13/34), 35.7% (5/14), and 100% (8/8), for the samples of sera, raw, and pasteurized milk respectively. The 5'untranslated region (5'UTR) of 23 clones that were generated from PCR products amplified from Camel samples (three sera, three raw, and two pasteurized milk samples) were subjected to sequence analysis. The camel TTV clones were classified as genotype 11 (47.8%), group 5 (43.5%), and SENV-H or genotype 16 (8.7%) which are among the predominant genotypes found in humans in the UAE. Phylogenetic analysis of representative sequences revealed that the similarity between isolates from camels and humans is 92%-97% for the same genotypes. The data lead to the conclusion that camels and humans share a common source of TTV infection in the UAE.


Subject(s)
Camelus/virology , DNA Virus Infections/epidemiology , DNA Virus Infections/virology , Torque teno virus/classification , Torque teno virus/genetics , Animals , DNA, Viral/analysis , DNA, Viral/blood , DNA, Viral/isolation & purification , Genotype , Humans , Milk/virology , Phylogeny , Sequence Analysis, DNA , United Arab Emirates/epidemiology
4.
J Med Virol ; 76(4): 534-40, 2005 Aug.
Article in English | MEDLINE | ID: mdl-15977226

ABSTRACT

GB virus-C/Hepatitis G virus (GBV-C/HGV), collectively known as GBV-C, is spread widely and has been reported to be associated with non A-E hepatitis. The aim of the current project was to determine the rate of infection and genotypic characteristics of GBV-C in the United Arab Emirates (UAE). A total of 379 plasma/serum samples representing different populations in the UAE and comprising healthy as well as patients positive for HBV and HCV were screened using RT-PCR/nested PCR of the 5'-untranslated region (UTR). National subjects (n=168) and non-nationals residing in the UAE (n=211) were tested. The results obtained showed that the rate of GBV-C infection in healthy nationals, and those positive for HCV or HBV were 11.1%, 14.3%, and 5.7%, respectively, compared to 8.3%, 33.3%, and 8.6%, respectively, in non-nationals. No statistically significant correlation between infection with GBV-C and HCV or HBV (P>0.05) was found. Sequence analysis of the 5'-UTR using 37 and 46 clones from 8 and 6 healthy nationals and non-nationals, respectively, revealed the prevalence of the European/North American genotype 2 when compared to the five reference genotypes in GenBank.


Subject(s)
Flaviviridae Infections/epidemiology , Flaviviridae Infections/virology , GB virus C/classification , GB virus C/isolation & purification , 5' Untranslated Regions/genetics , GB virus C/genetics , Genotype , Hepatitis B/virology , Hepatitis C/virology , Humans , Polymerase Chain Reaction , Prevalence , RNA, Viral/blood , Reverse Transcriptase Polymerase Chain Reaction , Risk Factors , Sequence Analysis, DNA , United Arab Emirates/epidemiology
5.
J Med Virol ; 72(3): 502-8, 2004 Mar.
Article in English | MEDLINE | ID: mdl-14748076

ABSTRACT

TT virus (TTV) and TTV-like viruses (TTVLs) have been reported to be associated with non-A-E hepatitis. To determine the rate of infection and genotypic characteristics of TTV in the United Arab Emirates (UAE), a total of 449 serum samples representing different populations in the UAE and comprising healthy as well as patients positive for HBsAg and HCV were screened. National subjects (n = 200) and non-nationals residing in the UAE (n = 249) were tested by PCR. The results obtained showed that the rate of TTV infection in healthy nationals, and those with HBsAg or antibody to HCV were 34.9, 97.9, and 95.7, respectively, compared to 89.1% (115/129), 89.2% (66/74), and 84.8% (39/46), respectively, in non-nationals. Sequence analysis of the untranslated region (UTR) using 71 clones generated from the PCR products of eight serum samples from healthy individuals (four nationals and four non-nationals) showed that 83.1% of the TTV clones were classified into groups 1-4, whereas 16.9% into possibly new genotype(s). The analysis also revealed that healthy national subjects carried multiple viruses. Phylogenetic analysis of representative sequences revealed clustering of clones into at least five major groups. Also, when compared to reference genotypes (from GenBank), two of our clones belonged to two previously identified genotypes. Non-significant gender differences were seen in all ethnic groups studied (P > 0.05). In conclusion, the rate of TTV infection in the UAE nationals is significantly lower (P < 0.05) than that of the non-nationals and several genotypes were isolated with common multi-infections.


Subject(s)
DNA Virus Infections/epidemiology , DNA Virus Infections/virology , Torque teno virus/classification , Torque teno virus/isolation & purification , Adolescent , Adult , DNA Virus Infections/diagnosis , DNA, Viral/genetics , DNA, Viral/isolation & purification , Female , Genotype , Hepatitis B/virology , Hepatitis B Surface Antigens/blood , Hepatitis C/virology , Hepatitis C Antibodies/blood , Humans , Male , Middle Aged , Phylogeny , Polymerase Chain Reaction , Prevalence , Sequence Analysis, DNA , Torque teno virus/genetics , United Arab Emirates , Untranslated Regions
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