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1.
ACG Case Rep J ; 7(11): e00480, 2020 Nov.
Article in English | MEDLINE | ID: mdl-33299901

ABSTRACT

We describe a case of Catha edulis (Khat) drug-induced liver injury in a 28-year-old man from Yemen. The patient presented with jaundice, fatigue, and anorexia. Extensive workup, including liver biopsy, was performed. This is the first reported case in the United States without definite autoimmune hepatitis. Diagnosis requires high clinical suspicion and extensive workup. Increasing migration and differences in cultural practices lead to the need for an increased awareness of this type of cases, which is underreported.

2.
Fam Cancer ; 18(3): 331-342, 2019 07.
Article in English | MEDLINE | ID: mdl-30989425

ABSTRACT

Many colorectal cancers (CRCs) that exhibit microsatellite instability (MSI) are not explained by MLH1 promoter methylation or germline mutations in mismatch repair (MMR) genes, which cause Lynch syndrome (LS). Instead, these Lynch-like syndrome (LLS) patients have somatic mutations in MMR genes. However, many of these patients are young and have relatives with cancer, suggesting a hereditary entity. We performed germline sequence analysis in LLS patients and determined their tumor's mutational profiles using FFPE DNA. Six hundred and fifty-four consecutive CRC patients were screened for suspected LS using MSI and absence of MLH1 methylation. Suspected LS cases were exome sequenced to identify germline and somatic mutations. Single nucleotide variants were used to characterize mutational signatures. We identified 23 suspected LS cases. Germline sequence analysis of 16 available samples identified five cases with LS mutations and 11 cases without LS mutations, LLS. Most LLS tumors had a combination of somatic MMR gene mutation and loss of heterozygosity. LLS patients were relatively young and had excess first-degree relatives with cancer. Four of the 11 LLS patients had rare likely pathogenic variants in genes that maintain genome integrity. Moreover, tumors from this group had a distinct mutational signature compared to tumors from LLS patients lacking germline mutations in these genes. In summary, more than a third of the LLS patients studied had germline mutations in genes that maintain genome integrity and their tumors had a distinct mutational signature. The possibility of hereditary factors in LLS warrants further studies so counseling can be properly informed.


Subject(s)
Colorectal Neoplasms, Hereditary Nonpolyposis/genetics , DNA Mismatch Repair , Germ-Line Mutation , Adult , Aged , Aged, 80 and over , DNA Methylation , DNA-Binding Proteins/genetics , Female , Heterozygote , Humans , Male , Microsatellite Instability , Middle Aged , Mismatch Repair Endonuclease PMS2/genetics , MutL Protein Homolog 1/genetics , MutS Homolog 2 Protein/genetics , Sequence Analysis, DNA
3.
Carcinogenesis ; 39(11): 1331-1341, 2018 12 13.
Article in English | MEDLINE | ID: mdl-30239619

ABSTRACT

African Americans (AAs) have higher incidence and mortality rates of colorectal cancer (CRC) compared with other US populations. They present with more right-sided, microsatellite stable disease and are diagnosed at earlier ages compared with non-Hispanic Whites (NHWs). To gain insight into these trends, we conducted exome sequencing (n = 45), copy number (n = 33) and methylation analysis (n = 11) of microsatellite stable AA CRCs. Results were compared with data from The Cancer Genome Atlas (TCGA). Two of the 45 tumors contained POLE mutations. In the remaining 43 tumors, only 27 (63%) contained loss-of-function mutations in APC compared with 80% of TCGA NHW CRCs. APC-mutation-negative CRCs were associated with an earlier onset of CRC (P = 0.01). They were also associated with lower overall mutation burden, fewer copy number variants and a DNA methylation signature that was distinct from the CpG island methylator phenotype characterized in microsatellite unstable disease. Three of the APC-mutation-negative CRCs had loss-of-function mutations in BCL9L. Mutations in driver genes identified by TCGA exome analysis were less frequent in AA CRC cases than TCGA NHWs. Genes that regulate the WNT signaling pathway, including SOX9, GATA6, TET1, GLIS1 and FAT1, were differentially hypermethylated in APC-mutation-negative CRCs, suggesting a novel mechanism for cancer development in these tumors. In summary, we have identified a subtype of CRC that is associated with younger age of diagnosis, lack of APC mutation, microsatellite and chromosome stability, lower mutation burden and distinctive methylation changes.


Subject(s)
Adenomatous Polyposis Coli Protein/genetics , Black or African American/genetics , Black or African American/statistics & numerical data , Colorectal Neoplasms/epidemiology , Colorectal Neoplasms/genetics , DNA Methylation/genetics , Microsatellite Repeats/genetics , Cadherins/genetics , Colorectal Neoplasms/pathology , DNA Copy Number Variations/genetics , DNA-Binding Proteins/genetics , Female , GATA6 Transcription Factor/genetics , Humans , Male , Microsatellite Instability , Middle Aged , Mixed Function Oxygenases/genetics , Proto-Oncogene Proteins/genetics , SOX9 Transcription Factor/genetics , Transcription Factors/genetics , Exome Sequencing , Wnt Signaling Pathway/genetics
6.
Clin Cancer Res ; 20(18): 4962-70, 2014 Sep 15.
Article in English | MEDLINE | ID: mdl-25013126

ABSTRACT

PURPOSE: African Americans (AA) have the highest incidence of colorectal cancer compared with other U.S. populations and more proximal colorectal cancers. The objective is to elucidate the basis of these cancer disparities. EXPERIMENTAL DESIGN: Of note, 566 AA and 328 non-Hispanic White (NHW) colorectal cancers were ascertained in five Chicago hospitals. Clinical and exposure data were collected. Microsatellite instability (MSI) and BRAF (V600E) and KRAS mutations were tested. Statistical significance of categorical variables was tested by the Fisher exact test or logistic regression and age by the Mann-Whitney U test. RESULTS: Over a 10-year period, the median age at diagnosis significantly decreased for both AAs (68-61; P < 0.01) and NHWs (64.5- 62; P = 0.04); more AA patients were diagnosed before age 50 than NHWs (22% vs. 15%; P = 0.01). AAs had more proximal colorectal cancer than NHWs (49.5% vs. 33.7%; P < 0.01), but overall frequencies of MSI, BRAF and KRAS mutations were not different nor were they different by location in the colon. Proximal colorectal cancers often presented with lymphocytic infiltrate (P < 0.01) and were diagnosed at older ages (P = 0.02). Smoking, drinking, and obesity were less common in this group, but results were not statistically significant. CONCLUSIONS: Patients with colorectal cancer have gotten progressively younger. The excess of colorectal cancer in AAs predominantly consists of more proximal, microsatellite stable tumors, commonly presenting lymphocytic infiltrate and less often associated with toxic exposures or a higher BMI. Younger AAs had more distal colorectal cancers than older ones. These data suggest two different mechanisms driving younger age and proximal location of colorectal cancers in AAs.


Subject(s)
Colorectal Neoplasms/epidemiology , Colorectal Neoplasms/genetics , Microsatellite Instability , Black or African American/genetics , Age Distribution , Age of Onset , Aged , Colorectal Neoplasms/pathology , Humans , Middle Aged , Mutation , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins B-raf/genetics , Proto-Oncogene Proteins p21(ras) , ras Proteins/genetics
7.
J Pediatr Surg ; 44(11): 2211-5, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19944235

ABSTRACT

Herein is reported case of an otherwise healthy full-term infant girl who presented with numerous spontaneous intestinal perforations with congenital absence of intestinal muscularis mucosae and muscularis propria. Few other cases are reported in the English literature with varying presentations. We review those cases, theories of pathogenesis, embryology, and possible connections to various clinical presentations.


Subject(s)
Intestinal Atresia/pathology , Intestines/abnormalities , Muscle, Smooth/abnormalities , Female , Humans , Ileum/abnormalities , Ileum/pathology , Ileum/surgery , Infant, Newborn , Intestinal Atresia/surgery , Intestinal Perforation/congenital , Intestinal Perforation/pathology , Intestinal Perforation/surgery , Intestines/pathology , Intestines/surgery , Male , Mucous Membrane/abnormalities , Mucous Membrane/pathology , Mucous Membrane/surgery , Muscle, Smooth/pathology , Muscle, Smooth/surgery
9.
Br J Haematol ; 141(1): 80-3, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18324970

ABSTRACT

Changes in spleen size postallogeneic haematopoietic stem cell transplantation (HSCT) in patients with primary myelofibrosis have been poorly characterized. We analysed 10 patients with myelofibrosis and splenomegaly following a reduced-intensity allogeneic HSCT. All patients fully engrafted donor cells including five patients with extensive splenomegaly. Extensive splenomegaly was associated with a prolonged time to neutrophil and platelet recovery. In all 10 patients, a progressive reduction of splenomegaly was documented within 12 months post-transplant and paralleled the reduction of marrow fibrosis. These findings suggest that myelofibrosis patients with extensive splenomegaly may proceed with allogeneic HSCT without prior splenectomy.


Subject(s)
Hematopoietic Stem Cell Transplantation/methods , Primary Myelofibrosis/therapy , Splenomegaly/etiology , Contraindications , Follow-Up Studies , Humans , Leukocyte Count , Middle Aged , Platelet Count , Primary Myelofibrosis/complications , Primary Myelofibrosis/pathology , Prognosis , Retrospective Studies , Splenomegaly/blood , Splenomegaly/pathology , Transplantation Conditioning/methods , Treatment Outcome
13.
Mod Pathol ; 18(11): 1498-503, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16007066

ABSTRACT

Patients with hepatocellular carcinoma who undergo orthotopic liver transplantation (OLT) are at risk for post-transplant tumor recurrence. The aim of this study was to evaluate whether expression of p53 and Ki-67 in hepatocellular carcinoma lesions present in explanted liver tissue was associated with time to tumor recurrence after OLT. Subjects consisted of 20 consecutive patients who underwent OLT and were found to have hepatocellular carcinoma in the liver explant. Immunostaining for p53 and Ki-67 was performed by standard methods. The presence of nuclear immunostaining in >10% of the tumor tissue was considered positive. Time to recurrence of hepatocellular carcinoma after OLT was compared between patients with positive and negative immunostaining by the log rank test. Multivariate analysis was performed using a Cox regression model to control for potentially confounding clinical factors. Time to post-transplant hepatocellular carcinoma recurrence was significantly more rapid in p53+ (P=0.0007) and Ki-67+ cases (P=0.001). These associations remained significant in multivariate analysis. Furthermore, time to recurrent hepatocellular carcinoma was significantly shorter in patients with a serum alpha feto-protein (AFP) level >or=100 ng/ml at time of diagnosis, compared to those with an AFP level <100 ng/ml (P=0.003). In conclusion, expression of p53 and Ki-67 in hepatocellular carcinoma lesions, and a serum AFP level >or=100 ng/ml were associated with more rapid recurrence of hepatocellular carcinoma after OLT. Identification of patients at risk for early post-transplant recurrence could be used to guide surveillance and adjuvant treatment strategies.


Subject(s)
Biomarkers, Tumor/analysis , Carcinoma, Hepatocellular/metabolism , Liver Neoplasms/metabolism , Liver Transplantation , Neoplasm Recurrence, Local/pathology , Carcinoma, Hepatocellular/pathology , Female , Humans , Immunohistochemistry , Ki-67 Antigen/biosynthesis , Liver Neoplasms/pathology , Male , Middle Aged , Prognosis , Tumor Suppressor Protein p53/biosynthesis , alpha-Fetoproteins/analysis
16.
Arch Pathol Lab Med ; 129(2): 241-3, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15679431

ABSTRACT

We describe a rare case of high-grade osteosarcoma with intravascular extension to the right atrium and right ventricle in a 23-year-old woman. Osteosarcomas rarely metastasize to the heart, and only a few cases have been reported in the literature thus far. Diagnoses in some of these cases were made during investigation for severe cardiac failure and in most of these cases at autopsy. We describe a unique case of intravascular extension of the tumor embolus in a cordlike fashion from the left femoral vein to the right side of the heart that morphologically resembled a chondrosarcoma.


Subject(s)
Heart Atria/pathology , Heart Neoplasms/secondary , Osteosarcoma/diagnosis , Osteosarcoma/secondary , Pelvic Neoplasms/diagnosis , Vascular Neoplasms/secondary , Adult , Female , Humans , Pelvic Neoplasms/pathology
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