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1.
medRxiv ; 2023 May 05.
Article in English | MEDLINE | ID: mdl-37205423

ABSTRACT

Familial concordance of nutritional status is an emerging field of study that may guide the development of interventions that operate beyond the individual and within the family context. Little published data exist for concordance of nutritional status within Pakistani households. We assessed the associations between weight status of mothers and their children in a nationally representative sample of households in Pakistan using Demographic and Health Survey data. Our analysis included 3465 mother-child dyads, restricting to children under-five years of age with body mass index (BMI) information on their mothers. We used linear regression models to assess the associations between maternal BMI category (underweight, normal weight, overweight, obese) and child's weight-for-height z-score (WHZ), accounting for socio-demographic characteristics of mothers and children. We assessed these relationships in all children under-five and also stratified by age of children (younger than 2 years and 2 to 5 years). In all children under-five and in children 2 to 5 years, maternal BMI was positively associated with child's WHZ, while there was no association between maternal BMI and child WHZ for children under-two. The findings indicate that the weight status of mother's is positively associated with that of their children. These associations have implications for interventions aimed at healthy weights of families.

2.
Comput Intell Neurosci ; 2023: 8585839, 2023.
Article in English | MEDLINE | ID: mdl-36909970

ABSTRACT

Describing the processes leading to deforestation is essential for the development and implementation of the forest policies. In this work, two different learning models were developed in order to identify the best possible model for the assessment of the deforestation causes and trends. We developed autoregressive integrated moving average (ARIMA) model and long short-term memory (LSTM) independently in order to see the trend between tree cover loss and carbon dioxide emission. This study includes the twenty-year data of Pakistan on tree cover loss and carbon emission from the Global Forest Watch (GFW) platform, a known platform to get numerical data. Minimum mean absolute error (MAE) for the prediction of tree cover loss and carbon emission obtained through ARIMA model is 0.89 and 0.95, respectively. The minimum MAE given by LSTM model is 0.33 and 0.43, respectively. There is no such kind of study conducted in order to identify the increase in carbon emission due to tree cover loss most specifically in Pakistan. The results endorsed that one of the main causes of increase in the pollution in the environment in terms of carbon emission is due to tree cover loss.


Subject(s)
Trees , Pakistan , Forecasting
3.
Microorganisms ; 11(2)2023 Feb 20.
Article in English | MEDLINE | ID: mdl-36838497

ABSTRACT

Coastal sediments in the proximity of wastewater and emergency outfalls are often sinks of pharmaceutical compounds and other organic and inorganic contaminants that are likely to affect the microbial community. The metabolites of these contaminants affect microbial diversity and their metabolic processes, resulting in undesirable effects on ecosystem functioning, thus necessitating the need to understand their composition and functions. In the present investigation, we studied the metagenomes of 12 coastal surface sediments through whole genome shot-gun sequencing. Taxonomic binning of the genes predicted about 86% as bacteria, 1% as archaea, >0.001% as viruses and Eukaryota, and 12% as other communities. The dominant bacterial, archaeal, and fungal genera were Woeseia, Nitrosopumilus, and Rhizophagus, respectively. The most prevalent viral families were Myoviridae and Siphoviridae, and the T4 virus was the most dominant bacteriophage. The unigenes further aligned to 26 clusters of orthologous genes (COGs) and five carbohydrate-active enzymes (CAZy) classes. Glycoside hydrolases (GH) and glycoside transferase (GT) were the highest-recorded CAzymes. The Kyoto Encyclopedia of Genes and Genomes (KEGG) level 3 functions were subjugated by purine metabolism > ABC transporters > oxidative phosphorylation > two-component system > pyrimidine metabolism > pyruvate metabolism > quorum sensing > carbon fixation pathways > ribosomes > and glyoxalate and dicarboxylate metabolism. Sequences allying with plasmids, integrons, insertion sequences and antibiotic-resistance genes were also observed. Both the taxonomies and functional abundances exhibited variation in relative abundances, with limited spatial variability (ANOVA p > 0.05; ANOSIM-0.05, p > 0.05). This study underlines the dominant microbial communities and functional genes in the marine sediments of Kuwait as a baseline for future biomonitoring programs.

4.
Front Microbiol ; 13: 955913, 2022.
Article in English | MEDLINE | ID: mdl-35966680

ABSTRACT

The airborne transmission of COVID-19 has drawn immense attention to bioaerosols. The topic is highly relevant in the indoor hospital environment where vulnerable patients are treated and healthcare workers are exposed to various pathogenic and non-pathogenic microbes. Knowledge of the microbial communities in such settings will enable precautionary measures to prevent any hospital-mediated outbreak and better assess occupational exposure of the healthcare workers. This study presents a baseline of the bacterial and fungal population of two major hospitals in Kuwait dealing with COVID patients, and in a non-hospital setting through targeted amplicon sequencing. The predominant bacteria of bioaerosols were Variovorax (9.44%), Parvibaculum (8.27%), Pseudonocardia (8.04%), Taonella (5.74%), Arthrospira (4.58%), Comamonas (3.84%), Methylibium (3.13%), Sphingobium (4.46%), Zoogloea (2.20%), and Sphingopyxis (2.56%). ESKAPEE pathogens, such as Pseudomonas, Acinetobacter, Staphylococcus, Enterococcus, and Escherichia, were also found in lower abundances. The fungi were represented by Wilcoxinia rehmii (64.38%), Aspergillus ruber (9.11%), Penicillium desertorum (3.89%), Leptobacillium leptobactrum (3.20%), Humicola grisea (2.99%), Ganoderma sichuanense (1.42%), Malassezia restricta (0.74%), Heterophoma sylvatica (0.49%), Fusarium proliferatum (0.46%), and Saccharomyces cerevisiae (0.23%). Some common and unique operational taxonomic units (OTUs) of bacteria and fungi were also recorded at each site; this inter-site variability shows that exhaled air can be a source of this variation. The alpha-diversity indices suggested variance in species richness and abundance in hospitals than in non-hospital sites. The community structure of bacteria varied spatially (ANOSIM r 2 = 0.181-0.243; p < 0.05) between the hospital and non-hospital sites, whereas fungi were more or less homogenous. Key taxa specific to the hospitals were Defluvicoccales, fungi, Ganodermataceae, Heterophoma, and H. sylvatica compared to Actinobacteria, Leptobacillium, L. leptobacillium, and Cordycipitaceae at the non-hospital site (LefSe, FDR q ≤ 0.05). The hospital/non-hospital MD index > 1 indicated shifts in the microbial communities of indoor air in hospitals. These findings highlight the need for regular surveillance of indoor hospital environments to prevent future outbreaks.

5.
Biomed Microdevices ; 20(3): 67, 2018 08 09.
Article in English | MEDLINE | ID: mdl-30090952

ABSTRACT

A microfluidic chip is described that facilitates research and quality control analysis of zebrafish sperm which, due to its miniscule (i.e., 2-5 µl) sample volume and short duration of motility (i.e., <1 min), present a challenge for traditional manual assessment methods. A micromixer molded in polydimethylsiloxane (PDMS) bonded to a glass substrate was used to activate sperm samples by mixing with water, initiated by the user depressing a transfer pipette connected to the chip. Sample flow in the microfluidic viewing chamber was able to be halted within 1 s, allowing for rapid analysis of the sample using established computer-assisted sperm analysis (CASA) methods. Zebrafish sperm cell activation was consistent with manual hand mixing and yielded higher values of motility at earlier time points, as well as more subtle time-dependent trends in motility, than those processed by hand. Sperm activation curves, which indicate sample quality by evaluating percentage and duration of motility at various solution osmolalities, were generated with on-chip microfabricated gold floor electrodes interrogated by impedance spectroscopy. The magnitude of admittance was linearly proportional to osmolality and was not affected by the presence of sperm cells in the vicinity of the electrodes. This device represents a pivotal step in streamlining methods for consistent, rapid assessment of sperm quality for aquatic species. The capability to rapidly activate sperm and consistently measure motility with CASA using the microfluidic device described herein will help improve the reproducibility of studies on sperm and assist development of germplasm repositories.


Subject(s)
Lab-On-A-Chip Devices , Sperm Motility , Animals , Equipment Design , Male , Osmolar Concentration , Reproducibility of Results , Spermatozoa/physiology , Surface Properties , Zebrafish
6.
Mar Pollut Bull ; 133: 861-864, 2018 Aug.
Article in English | MEDLINE | ID: mdl-30041387

ABSTRACT

Copepods are the most abundant metazoans, forming a vital food chain link between the primary producers the phytoplankton and fish. This study presents baseline information on the concentration of 210Po among calanoid copepods isolated from the Kuwait marine area. The concentration of 210Po in six species of copepod, including Subeucalanus flemingeri, Parvocalanus crassirostis, Acartia pacifica, Calanopia elliptica, Acrocalanus gibber, and Euterpina acutifrons were 151.3-158.8 Bq kg-1 wwt, 121.1-129.5 Bq kg-1 wwt, 51.23-54.91 Bq kg-1 wwt, 38.88-40.09 Bq kg-1 wwt, 38.07-38.29 Bq kg-1 wwt, and 33.46-36.50 Bq kg-1 wwt, respectively. The 210Po concentration in seawater shows a seasonal variation, with a higher concentration range of 0.58-0.70 mBq L-1 during summer and autumn, while a lower concentration is found (0.30-0.38 mBq L-1) during winter and spring. The concentration factor among the copepods varies between 8 ∗ 104 and 5 ∗ 105 that is an order of magnitude higher than the diatoms and dinoflagellates.


Subject(s)
Copepoda/chemistry , Polonium/analysis , Water Pollutants, Radioactive/analysis , Animals , Copepoda/classification , Copepoda/growth & development , Diatoms/chemistry , Dinoflagellida/chemistry , Food Chain , Kuwait , Phytoplankton/chemistry , Phytoplankton/classification , Phytoplankton/growth & development , Seasons , Seawater/chemistry
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