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1.
J Chem Inf Model ; 63(7): 1999-2013, 2023 04 10.
Article in English | MEDLINE | ID: mdl-36952668

ABSTRACT

We present TopIso3D Viewer, a software with a user-friendly graphical interface, that generates three-dimensional maps to analyze descriptors based on the Quantum Theory of Atoms in Molecules (QTAIM), applied in periodic and nonperiodic systems. The software also automates the launching of topological analysis calculations through the Topond package and generates a report that facilitates the identification of the values of the calculated descriptors, in the Bond Critical Points (BCP) and Critical Points of the Laplacian of the electron density (LCP), facilitating the classification of chemical interactions. The map projects created can be stored in the form of HTML files, for later consultation through any type of browser. For validation of the software, several systems with 0-3D dimensions were studied. In addition, the topology of urea molecular crystal and its isolated molecule were revisited.


Subject(s)
Quantum Theory , Software , Models, Molecular
2.
Int J Biol Macromol ; 164: 4245-4251, 2020 Dec 01.
Article in English | MEDLINE | ID: mdl-32890567

ABSTRACT

The aim of this work consists in the use of cashew gum (Anacardium occidentale), a naturally occurring tropical specie from the Brazilian northeastern coast, for the synthesis of CoFe2O4 (CF) and NiFe2O4 (NF) nanoparticles. The structural, morphological and vibrational properties of nanoparticles were characterized by analytical and spectroscopic techniques such as X-ray diffraction (XRD), FTIR, Raman spectroscopy, TEM, SAED and TG. Magnetic properties were investigated through Mössbauer spectroscopy and DC magnetometry. The XRD results showed single phase nanoparticles with space group Fd-3m and crystallite size of 7.4 and 6.0 for CF and NF, respectively. TEM images showed agglomerated particles with mode sizes of 5.0 and 6.5 nm for CF and NF. SAED confirmed the crystalline spinel structure. The TGA and FTIR showed the presence of a carbonaceous material in the samples. FTIR and Raman spectroscopy demonstrated vibrational modes characteristic of metal­oxygen bonds in the tetrahedral and octahedral sites. Magnetization measurements showed that both samples are superparamagnetic at 300 K. The Mössbauer spectra at 90 K showed the presence of single-phase CF and NF.


Subject(s)
Anacardium/chemistry , Cobalt/chemistry , Gels/chemistry , Nanostructures/chemistry , Nickel/chemistry , Plant Gums/chemistry , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman , Thermogravimetry , X-Ray Diffraction
3.
Inorg Chem ; 59(11): 7666-7680, 2020 Jun 01.
Article in English | MEDLINE | ID: mdl-32338503

ABSTRACT

The impact of Eu3+ doping at the Sr2+ and Sn4+ sites in SrSnO3 on its structural and electronic properties was studied and correlated with the photocatalytic efficiency. The compounds were synthesized using a modified Pechini method. Refinement of the synchrotron X-ray diffraction (S-XRD) data showed that the samples had an orthorhombic Pbnm symmetry. The incorporation of Eu into the lattice led to increased short- and long-range disorder, inducing additional distortion in the SnO6. XANES measurements revealed that mixed Eu valences (Eu3+ and Eu2+) were present in Eu-doped samples, and DFT calculations confirmed the presence of these ions at Sr2+/Sr4+ sites in the SrSnO3, resulting in changes in the electronic behavior. The catalytic performance toward Remazol yellow dye photodegradation and the catalysts' surface properties were also evaluated. The catalytic efficiency followed the order of Sr(Sn0.99Eu0.01)SnO3 > (Sr0.99Eu0.01)SnO3 > SrSnO3. The order was clearly related to selected-site doping that changed the degree of the inter- and intraoctahedral distortion and the introduction of different Eu midgap states, which apparently favor charge separation upon photoexcitation during photocatalysis. The results shown here are of great importance to the functionalization of SrSnO3 and other perovskite materials by lanthanoid ions, especially Eu3+, for effective applications as photocatalysts.

4.
J Phys Chem A ; 116(47): 11731-5, 2012 Nov 29.
Article in English | MEDLINE | ID: mdl-23131072

ABSTRACT

Periodic DFT/B3LYP calculations for TiO(2) anatase bulk were carried out including semiempirical dispersive interactions (DFT-D2) to pure Khon-Sham DFT energy. From this standard methodology, van der Waals (vdW) radii were optimized to 1.4214 Å for titanium and 1.3420 Å for oxygen centers in order to achieve a better structural description. The results from this approach (here named DFT/B3LYP-D*) showed a better description for lattice constants, vibrational IR and Raman, energy band gaps, and bulk modulus than default DFT/B3LYP and DFT/B3LYP-D. The dispersion correction showed more reliable results and was necessary to achieve a good agreement with reported single crystal results, without new formalism or additional computational cost.

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