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1.
Microb Genom ; 6(9)2020 09.
Article in English | MEDLINE | ID: mdl-32845827

ABSTRACT

Commensal non-pathogenic Neisseria spp. live within the human host alongside the pathogenic Neisseria meningitidis and Neisseria gonorrhoeae and due to natural competence, horizontal gene transfer within the genus is possible and has been observed. Four distinct Neisseria spp. isolates taken from the throats of two human volunteers have been assessed here using a combination of microbiological and bioinformatics techniques. Three of the isolates have been identified as Neisseria subflava biovar perflava and one as Neisseria cinerea. Specific gene clusters have been identified within these commensal isolate genome sequences that are believed to encode a Type VI Secretion System, a newly identified CRISPR system, a Type IV Secretion System unlike that in other Neisseria spp., a hemin transporter, and a haem acquisition and utilization system. This investigation is the first to investigate these systems in either the non-pathogenic or pathogenic Neisseria spp. In addition, the N. subflava biovar perflava possess previously unreported capsule loci and sequences have been identified in all four isolates that are similar to genes seen within the pathogens that are associated with virulence. These data from the four commensal isolates provide further evidence for a Neisseria spp. gene pool and highlight the presence of systems within the commensals with functions still to be explored.


Subject(s)
Bacterial Proteins/genetics , Neisseria/classification , Pharynx/microbiology , Whole Genome Sequencing/methods , Gene Transfer, Horizontal , Healthy Volunteers , High-Throughput Nucleotide Sequencing , Humans , Multigene Family , Neisseria/genetics , Neisseria/isolation & purification , Neisseria/pathogenicity , Phylogeny , Symbiosis , Type VI Secretion Systems/genetics , Virulence Factors/genetics
2.
Anim Sci J ; 85(6): 714-21, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24712377

ABSTRACT

The objective of this paper was to evaluate the global milk quality in Tunisian dairy herds. Samples of milk were analyzed for chemical, physical and hygienic parameters. Milk total solids, fat content and density were consistently correlated and one of them can be used as a chemical indicator of milk quality. The somatic cell count value of 689 × 10(3) /mL was higher than the recommended threshold. All milk samples were positive for the major pathogen Staphylococcus aureus. These hygienic parameters were related more closely with chloride content, minerals and electrical conductivity, which allows them to be used as indicators of mammary gland infection. It was concluded that milk producers have at hand rapid and easy tools for assessing the overall quality of milk.


Subject(s)
Dairying , Food Analysis/methods , Food Quality , Milk , Animals , Biomarkers , Cattle , Cell Count , Chlorides/analysis , Electric Conductivity , Female , Mammary Glands, Animal , Mastitis, Bovine/diagnosis , Milk/chemistry , Milk/cytology , Milk/microbiology , Minerals/analysis , Staphylococcus aureus/isolation & purification , Tunisia
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