GENETIC CHARACTERIZATION OF AN ALGERIAN POPULATION OF MYCOSPHAERELLA GRAMINICOLA WITH MICROSATELLITE MARKERS.

Mycosphaerella graminicola (anamorph: Zymoseptoria tritici, formerly Septoria tritici), the responsible for Septoria tritici blotch, is the most frequently occurring disease on wheat crops worldwide. The populations of this pathogen were previously characterized in several areas around the world, but not in Algeria so far. The present study aims thus at investigating the genetic diversity and population structure of M. graminicola in this country. One hundred and twenty monoconidial isolates of this fungus (60 from bread wheat and 60 from durum wheat) were collected during the 2012 growing season from five distinct geographical locations in Algeria. They were then fingerprinted using eight microsatellite markers. The number of alleles per locus ranged from 2 to 11, with an average of 6.25 alleles per locus. We found out a moderate gene diversity, a high genotype diversity (72% of unique haplotypes) and a low population differentiation within the population. Further analyses using both UPGMA and Bayesian clustering methods confirmed the lack of genetic structuration irrespective of geographical locations and host species. These findings are likely due to the frequent occurrence of sexual reproduction in the field, leading to genetic diversification and allele homogenization via wind born ascospores within the population.

BOTH MAT1-1 AND MAT1-2 MATING TYPES OF MYCOSPHAERELLA GRAMINICOLA OCCUR AT EQUAL FREQUENCIES IN ALGERIA.

Septoria tritici blotch caused by Mycosphaerella graminicola is currently the most devastating disease on wheat crops worldwide. Mycosphaerella graminicola sexual reproduction involves two mating type idiomorphs that were previously studied in several areas around the world, but not in Algeria so far. The objective of this study was thus to determine the frequencies and distribution of M. graminicola mating types in this country. One hundred and twenty monoconidial isolates of this fungus (60 from bread wheat and 60 from durum wheat) were collected during the 2012 growing season from five distinct geographical locations in Algeria. The mating type of each isolate was identified using a multiplex PCR that amplifies either MAT1-1 or MAT1-2 fragment from mating type loci. Both idiomorphs were found at equal frequencies according to the chi-square test at the whole country level (46% MAT1-1 and 54% MAT1-2) and in each of the sampled locations. The two mating types were also detected at equal frequencies on both host species (47% MAT1-1 vs 53% MAT1-2 on bread wheat and 45% MAT1-1 vs 55% MAT1-2 on durum wheat). Our study showed that the two mating types of M. graminicola occur at equal proportions in Algeria and suggests a strong potential for sexual reproduction of the pathogen in this country that may eventually lead to either adaptation to local conditions, plant resistance overcoming or the emergence of resistance to fungicides.

Assessment of the cytochrome B substitution G143A in the Algerian population of Mycosphaerella graminicola.

Mycosphoerella graminicola (anamorph: Zymoseptoria tritici), causal agent of Septoria tritici blotch, is currently one of the most damaging diseases on both bread and durum wheat crops worldwide. Since wheat resistance against this pathogen is always partial at various extents in most cultivars, disease control relies mainly on the use of fungicides. However, management of fungicide applications is necessary in order to avoid the emergence and widespread of fungicide resistant genotypes within populations of the pathogen. In the present study, we investigated for the first time the resistance of M. graminicola toward strobilurin fungicides in Algeria. This was performed by identifying the G143A substitution of the cytochrome b encoding sequence (which confers resistance to strobilurins) in a collection of 120 single-conidial isolates. These isolates have been sampled during the 2012 growing season from five distinct geographical locations (Guelma, Annaba, Constantine, Skikda and Oran). We used a PCR-based mismatch mutation assay allowing the amplification of either G143 (sensitive) or A143 (resistant) allele in each isolate. This study should give valuable information regarding the management of strobilurin use in order to control in a durable manner M. graminicola epidemics in Algeria.