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1.
Heredity (Edinb) ; 115(6): 527-37, 2015 12.
Article in English | MEDLINE | ID: mdl-26174025

ABSTRACT

The processes and timescales associated with ocean-wide changes in the distribution of marine species have intrigued biologists since Darwin's earliest insights into biogeography. The Azores, a mid-Atlantic volcanic archipelago located >1000 km off the European continental shelf, offers ideal opportunities to investigate phylogeographic colonisation scenarios. The benthopelagic sparid fish known as the common two-banded seabream (Diplodus vulgaris) is now relatively common along the coastline of the Azores archipelago, but was virtually absent before the 1990 s. We employed a multiple genetic marker approach to test whether the successful establishment of the Azorean population derives from a recent colonisation from western continental/island populations or from the demographic explosion of an ancient relict population. Results from nuclear and mtDNA sequences show that all Atlantic and Mediterranean populations belong to the same phylogroup, though microsatellite data indicate significant genetic divergence between the Azorean sample and all other locations, as well as among Macaronesian, western Iberian and Mediterranean regions. The results from Approximate Bayesian Computation indicate that D. vulgaris has likely inhabited the Azores for ∼ 40 (95% confidence interval (CI): 5.5-83.6) to 52 (95% CI: 6.32-89.0) generations, corresponding to roughly 80-150 years, suggesting near-contemporary colonisation, followed by a more recent demographic expansion that could have been facilitated by changing climate conditions. Moreover, the lack of previous records of this species over the past century, together with the absence of lineage separation and the presence of relatively few private alleles, do not exclude the possibility of an even more recent colonisation event.


Subject(s)
Genetics, Population , Perciformes/genetics , Animals , Atlantic Ocean , Azores , Bayes Theorem , DNA, Mitochondrial/genetics , Genetic Markers , Genetic Variation , Haplotypes , Microsatellite Repeats , Models, Genetic , Molecular Sequence Data , Phylogeography , Sequence Analysis, DNA
2.
J Fish Biol ; 85(5): 1793-8, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25257102

ABSTRACT

Using the mitochondrial non-coding region I, it was shown that the two Spanish Lampetra planeri populations (Cares-Deva and Olabidea-Ugarana) correspond to different genetic units. The Cares-Deva population is probably a recent offshoot of Lampetra fluviatilis, being the Olabidea-Ugarana population less diverse and of older origin.


Subject(s)
Genetics, Population , Lampreys/classification , Animals , DNA, Mitochondrial/genetics , Gene Flow , Genetic Variation , Haplotypes , Lampreys/genetics , Sequence Analysis, DNA , Spain
3.
J Fish Biol ; 85(2): 473-87, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24961593

ABSTRACT

The phylogenetic relationships among the North Atlantic Gaidropsarus and between the three Gaidropsarinae genera Gaidropsarus, Ciliata and Enchelyopus are reviewed with the hitherto most comprehensive taxonomic sampling of this group. Phylogenetic results (maximum parsimony, maximum likelihood and Bayesian inference) based on nuclear (rhodopsin) and concatenated mitochondrial (12s, 16s and cytb) markers clearly support this subfamily. For the north-eastern Atlantic species of Gaidropsarus, two previously unreported clades were strongly supported, clarifying the relationships within the genus, and revealing fewer distinct taxa in the north Atlantic Gaidropsarus than previously stipulated. The data challenge the specific status of Gaidropsarus mediterraneus and Gaidropsarus guttatus and raise doubts concerning the distinctiveness of other species. A taxonomic revision of the genus is suggested.


Subject(s)
Gadiformes/classification , Phylogeny , Animals , Atlantic Ocean , Bayes Theorem , DNA, Mitochondrial/genetics , Gadiformes/genetics , Likelihood Functions , RNA, Ribosomal, 16S/genetics , Rhodopsin/genetics , Sequence Analysis, DNA
4.
Mol Phylogenet Evol ; 67(1): 1-8, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23277159

ABSTRACT

A molecular phylogeny of 15 (out of 26 recognized) species of Parablennius Miranda Ribeiro, 1915 was constructed based on two mitochondrial and two nuclear gene fragments, and using maximum parsimony, maximum likelihood and Bayesian approaches. The closely related genera Hypleurochilus, Salaria and Scartella were also studied to ascertain their relationship with Parablennius. Phylogenetic analyses were compared with morphology-based taxonomical studies. Hypleurochilus, Salaria and Scartella appear well supported within a clade including all Parablennius, indicating that this genus is paraphyletic. The species pairs P. parvicornis-P. sanguinolentus and P. gattorugine-P. ruber are well-supported and relatively distant from remaining Parablennius. Remaining Parablennius form two distinct well-supported groups: (1) a clade of Atlantic-Mediterranean Parablennius (P. pilicornis, P. marmoreus, P. rouxi, P. salensis and P. tentacularis); (2) a clade including Hypleurochilus, the Indo-Western Pacific Parablennius (P. cornutus, P. intermedius, P. tasmanianus and P. yatabei) and the Atlantic-Mediterranean P. incognitus and P. zvonimiri. Use of a relaxed molecular clock suggests that Indo-Pacific Parablennius originated recently from an Atlantic Parablennius that may have dispersed via southern Africa, rather than via the Tethys seaway.


Subject(s)
Evolution, Molecular , Perciformes/classification , Phylogeny , Animal Distribution , Animals , Atlantic Ocean , Bayes Theorem , Cell Nucleus/genetics , DNA, Mitochondrial/genetics , Indian Ocean , Likelihood Functions , Models, Genetic , Perciformes/genetics , Sequence Alignment , Sequence Analysis, DNA
5.
Anim Cogn ; 15(6): 1173-81, 2012 Nov.
Article in English | MEDLINE | ID: mdl-22864924

ABSTRACT

Although navigation is common in many animals, only a few perform true navigation, meaning that they have the ability to return to a given place by relying on indirect cues obtained at the release site (i.e., by relying on information from a "map and compass" mechanism). The common intertidal fish, Lipophrys pholis, is thought to have homing abilities through a mechanism that primarily makes use of familiar landmarks (i.e., piloting). Anecdotal reports that individuals return to their home pools after release at unfamiliar sites suggest that L. pholis might use cues collected at the release site to find their way back (i.e., they might use map and compass information). Using a completely artificial setup, we tested the homing abilities of L. pholis as a function of age, sex, and familiarity with the release site. The findings showed that motivation for homing is present only in the adult phase and is independent of sex and/or familiarity with the release site. Moreover, adults released at a completely unfamiliar place oriented themselves in a direction roughly similar to that of their home pools. The fact that L. pholis were tested in a complete artificial environment means that hydrodynamic cues can be excluded as playing a role in this process and restricts the candidate options (e.g., magnetic cues). The ability to perform navigation based on a "map and compass" mechanism raises many interesting questions about the learning process, once these individuals have restricted home ranges during their lives. In vertebrate navigation, the cues used during the navigation process are a question of debate, and L. pholis offers an outstanding model to test hypotheses and ultimately provide answers.


Subject(s)
Fishes , Homing Behavior , Learning , Age Factors , Animals , Cues , Environment , Female , Male , Water Movements
6.
Mol Phylogenet Evol ; 61(1): 71-8, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21693193

ABSTRACT

Sand-smelts are small fishes inhabiting inshore, brackish and freshwater environments and with a distribution in the eastern Atlantic and Mediterranean Sea, extending south into the Indian Ocean. Here, we present a broad phylogenetic analysis of the genus Atherina using three mitochondrial (control region, 12S and 16S) and two nuclear markers (rhodopsin and 2nd intron of S7). Phylogenetic analyses fully support the monophyly of the genus. Two anti-tropical clades were identified, separating the South African Atherina breviceps from the north-eastern Atlantic and Mediterranean Atherina' species. In European waters, two groups were found. The first clade formed by a well supported species-pair: Atherina presbyter (eastern Atlantic) and Atherina hepsetus (Mediterranean), both living in marine waters; a second clade included Atherina boyeri (brackish and freshwater environments) and two independent lineages of marine punctated and non-punctated fishes, recently proposed as separate species. Sequence divergence values strongly suggest multiple species within the A. boyeri complex.


Subject(s)
DNA, Mitochondrial/genetics , Rhodopsin/genetics , Smegmamorpha/classification , Smegmamorpha/genetics , Animals , Base Sequence , Evolution, Molecular , Fresh Water , Genetic Speciation , Geography , Mitochondria/genetics , Multilocus Sequence Typing , Phylogeny , RNA, Ribosomal/genetics , RNA, Ribosomal, 16S/genetics , Seawater , Sequence Analysis, DNA , Smegmamorpha/physiology
7.
Mol Phylogenet Evol ; 58(2): 409-13, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21185388

ABSTRACT

The Lusitania Province has been considered a transition zone between the Atlantic northern cold waters and Tropical warm waters. Tropical species have expanded their ranges during warm periods and either retreated during cold periods or survived in local refuges. Successive waves of dispersion into this Province could have favored diversification through geographic isolation. Taxa that remained in this large Province may also have diversified in loco. We analyzed molecular markers of the genus Microlipophrys (family Blenniidae) that confirm the validity of this genus and of the seven recognized species. Microlipophrys and its sister clade apparently originated within Lusitania and dispersed into the tropics at a later stage.


Subject(s)
Evolution, Molecular , Perciformes/classification , Phylogeny , Animals , Genetic Markers , Geography , Perciformes/genetics , Sequence Analysis, DNA
8.
J Fish Biol ; 77(2): 361-71, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20646161

ABSTRACT

The populations of brook lamprey Lampetra planeri of Portuguese Rivers were analysed phylogeographically using a fragment of 644 bp of the mitochondrial control region of 158 individuals from six populations. Samples representing L. planeri and migratory lampreys Lampetra fluviatilis of rivers draining to the North Sea and the Baltic Sea were also included to assess the relationships of Portuguese samples. The data support a clear differentiation of all the populations studied. Several populations, which are isolated among themselves and also from the migratory lampreys, proved to be entirely composed of private haplotypes, a finding that supports some time of independent evolutionary history for these populations. This, combined with the geographic confinement to small water bodies, justifies the recognition of at least four conservation units in the Portuguese rivers Sado, São Pedro, Nabão and Inha.


Subject(s)
Evolution, Molecular , Genetics, Population , Lampreys/genetics , Phylogeny , Animals , DNA, Mitochondrial/genetics , Genetic Variation , Geography , Haplotypes , Lampreys/classification , Portugal , Rivers , Sequence Analysis, DNA
10.
Mol Phylogenet Evol ; 52(2): 424-31, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19348958

ABSTRACT

In this paper, the phylogenetic relationships of the marine blenny Salaria pavo and the freshwater S. fluviatilis and S. economidisi were analyzed using four molecular markers: the mitochondrial 12S rRNA, 16S rRNA, and the control region and the nuclear first intron of the S7 ribosomal protein. The monophyly of Salaria is supported, as well as that of S. pavo and that of all the freshwater members of Salaria. Thus, the present results support a single origin for all freshwater Mediterranean blenniids. Our results reject the placement of the species of Salaria in the genus Lipophrys as proposed in previous studies. Using a molecular clock calibrated with trans-Isthmian geminate blenniid species, the split between the ancestor of the freshwater lineage and the ancestor of S. pavo is tentatively placed in the Middle Miocene (well before the Messinian). The marine S. pavo displays a very low level of intraspecific sequence divergence consistent with a Pleistocene bottleneck. S. fluviatilis is a paraphyletic entity with S. economidisi nested within it. A Moroccan population of S. fluviatilis is more divergent than S. economidisi, both in nuclear and mitochondrial genes. Fish from Israel together with some Turkish samples represent the second oldest split. It is argued that these populations may represent cryptic species. Thus, further studies on the taxonomy of these freshwater blennies are urgently needed.


Subject(s)
Evolution, Molecular , Perciformes/genetics , Phylogeny , Animals , Bayes Theorem , Cell Nucleus/genetics , DNA, Mitochondrial/genetics , Fresh Water , Genetic Markers , Genetic Speciation , Likelihood Functions , Mediterranean Sea , Models, Genetic , Perciformes/classification , Sequence Alignment , Sequence Analysis, DNA
13.
J Anim Ecol ; 77(2): 390-4, 2008 Mar.
Article in English | MEDLINE | ID: mdl-18194263

ABSTRACT

1. Some syngnathid species show varying degrees of sex role reversal aside from male pregnancy, with females competing for access to mates and sometimes presenting conspicuous secondary sexual characters. Among other variables, brooding space constraints are usually considered a key element in female reproductive success, contributing strongly to the observed morphological and behavioural sexual differences. Nevertheless, a close relationship between sex role reversal and male brooding space limitation has not yet been accurately demonstrated in field studies. 2. The present work, conducted over two consecutive breeding seasons in a wild population of the sex role-reversed pipefish Syngnathus abaster, simultaneously analysed egg number and occupied space, as well as the free area in the male's marsupium. The number of eggs that would fit in the observed unoccupied space was estimated. 3. Contrary to what would be expected, given the marked sexual dimorphism observed in the population studied, where females were larger and more colourful, male brooding space did not appear to limit female reproduction as neither large nor small individuals presented a fully occupied pouch. Interestingly, the largest unoccupied areas of marsupium were found in the larger individuals, although they received more and larger eggs. Laboratory data also showed that larger females lay larger eggs. 4. Together, these results suggest the existence of assortative mating, which may result from: (i) the reluctance of larger males (which tend not to receive small eggs usually laid by small females) to mate with lower quality females, even at the expense of a smaller number of offspring; or (ii) female-female competition, which might strongly reduce the hypothesis of a small female mating with a large male. The potential impact of temperature on reproduction and population dynamics is also discussed in the light of ongoing climatic changes.


Subject(s)
Clutch Size , Disorders of Sex Development , Fishes/physiology , Oviposition/physiology , Sexual Behavior, Animal/physiology , Animals , Body Size , Climate , Competitive Behavior/physiology , Female , Male , Population Density , Sex Characteristics
14.
Mol Phylogenet Evol ; 46(1): 155-66, 2008 Jan.
Article in English | MEDLINE | ID: mdl-17904872

ABSTRACT

In this paper, the patterns of cladogenesis in the cyprinid fish genus Iberochondrostoma were analysed using a mitochondrial (cytochrome b) and a nuclear (beta-actin) gene fragment. The two genes yielded discordant results. While the cytochrome b gene yielded a fully dichotomous tree, where all species of the genus are monophyletic, the much slower beta-actin gene yielded star-like relationships. However, when information from both genes was considered together, the data suggested the persistence of a very large central unit from which at least two peripheral clades arose at different times. This pattern which is akin to peripatric speciation was shown to be compatible with the paleogeographical information available. It is suggested that combining the techniques of phylogeny and phylogeography and the use of multiple markers varying in their rate of evolution may enrich our understanding of speciation and evolution of clades beyond species level.


Subject(s)
Cyprinidae/classification , Cyprinidae/genetics , Genetic Speciation , Actins/genetics , Animals , Cell Nucleus/genetics , Cytochromes c/genetics , Genes, Mitochondrial/genetics , Phylogeny , Polymorphism, Single Nucleotide , Sequence Analysis, DNA
17.
Horm Behav ; 30(1): 2-12, 1996 Mar.
Article in English | MEDLINE | ID: mdl-8724173

ABSTRACT

The relationship between urinary concentrations (free + sulfates + glucuronides) of the steroids testosterone (T), 11-ketotestosterone (11KT), 17 alpha, 20 beta-dihydroxy-4-pregnen-3-one (17, 20 beta-P) and 17 alpha, 20 alpha-dihydroxy-4-pregnen-3-one (17, 20 alpha-P), and the social behavior of males of the cichlid fish Oreochromis mossambicus was investigated. After 8 days of isolation none of the steroids were good predictors of social dominance developed after subsequent formation of all-male groups. One day after group formation dominance indexes were good predictors of the urine concentrations of all sex steroids. Dominance indexes and androgen concentrations measured after all-male group formation were positively correlated with territoriality, courtship rate, and nest size. Similar relationships were found for progestins with the exception that they were not correlated with courtship rate. All-male group formation was also accompanied by an increase in urinary sex steroid concentrations in fish that became territorial and a decrease in non-territorial fish with the exception of T, which increased in both groups. Addition of ovulating females caused steroid concentrations to return to levels near isolation, except for 17, 20 alpha-P in territorials, which underwent a large increase. Thus, social interactions may have an important modulatory effect on sex steroid concentrations in O. mossambicus.


Subject(s)
Behavior, Animal , Social Behavior , Steroids/urine , Animals , Male , Perches , Radioimmunoassay , Time Factors
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