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1.
Org Biomol Chem ; 12(33): 6432-9, 2014 Sep 07.
Article in English | MEDLINE | ID: mdl-25017473

ABSTRACT

A new fluorescein derivative with ON/OFF features, 9-[1-(4-tert-butyl-2-methoxyphenyl)]-6-hydroxy-3H-xanthen-3-one (Granada Green, GG), was designed and synthesised. The new dye has spectral characteristics similar to those of other xanthenic derivatives but shows a higher pK(a) value for the equilibrium between its neutral and anionic forms. In addition, GG undergoes the same phosphate-mediated excited state proton transfer (ESPT) reaction as other xanthenic derivatives, giving rise to fluorescence decay traces that are dependent on both the phosphate concentration and pH of the medium. The phosphate-mediated ESPT reaction was employed to detect changes in the phosphate concentrations in live, permeabilised MC3T3-E1 preosteoblasts at pH 7.35. Its high pK(a) value indicates that this new dye is more sensitive as an intracellular phosphate sensor than other previously tested dyes, as experimentally demonstrated by its ability to detect a wider range of phosphate concentrations in biomimetic media and by the increased ratio of the phosphate concentration/decay time.


Subject(s)
Fluorescent Dyes/chemistry , Phosphates/analysis , Xanthenes/chemistry , 3T3 Cells , Animals , Cell Survival , Cells, Cultured , Fluorescent Dyes/chemical synthesis , Mice , Molecular Structure , Quantum Theory , Xanthenes/chemical synthesis
2.
J Biotechnol ; 93(1): 73-85, 2002 Jan 31.
Article in English | MEDLINE | ID: mdl-11690696

ABSTRACT

Phycoerythrin is a major light-harvesting pigment of red algae and cyanobacteria that is widely used as a fluorescent probe and analytical reagent. In this paper, B-phycoerythrin and R-phycocyanin in native state, from the red alga Porphyridium cruentum were obtained by an inexpensive and simple process. The best results of this purification procedure were scaled up by a factor of 13 to a large preparative level using an anionic chromatographic column of DEAE cellulose. Gradient elution with acetic acid-sodium acetate buffer (pH 5.5) was used. In these conditions both 32% of B-phycoerythrin and 12% of R-phycocyanin contained in the biomass of the microalgae was recovered. B-phycoerythrin was homogeneous as determined by sodium dodecyl sulfate-poly-acrylamide gel electrophoresis (SDS-PAGE), yielding three migrating bands corresponding to its three subunits, consistent with the (alpha beta)(6)gamma subunit composition characteristic of this biliprotein and the spectroscopic characterization of B-PE (UV-visible absorption and emission spectroscopy; steady-state and polarization fluorescence), is accompanied. Finally, a preliminary cost analysis of the recovery process is presented.


Subject(s)
Phycoerythrin/isolation & purification , Rhodophyta/chemistry , Biomass , Biotechnology , Chromatography, DEAE-Cellulose , Electrophoresis, Polyacrylamide Gel , Rhodophyta/growth & development , Spectrophotometry
3.
J Chromatogr A ; 917(1-2): 135-45, 2001 May 11.
Article in English | MEDLINE | ID: mdl-11403465

ABSTRACT

A fast preparative two-step chromatographic method for purification of B-phycoerythrin from Porphyridium cruentum is described. This biliprotein was homogeneous as determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis yielding three closely migrating bands corresponding to its three subunits. Baseline separation of its alpha-, beta- and gamma-subunits was achieved by a reversed-phase HPLC gradient semipreparative method with a C4 large-pore column and a solvent system consisting of 0.05% trifluoroacetic acid (TFA) in water and 0.05% TFA in acetonitrile. B-Phycoerythrin in different aggregation states and its subunits have been spectroscopically characterized. Hexameric B-phycoerythrin has similar secondary and tertiary structure than dissociated B-phycoerythrin determined by circular dichroism.


Subject(s)
Chromatography, High Pressure Liquid/methods , Phycoerythrin/isolation & purification , Rhodophyta/chemistry , Electrophoresis, Polyacrylamide Gel , Phycoerythrin/chemistry , Spectrophotometry, Ultraviolet
4.
J Photochem Photobiol B ; 59(1-3): 9-14, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11332896

ABSTRACT

Sensitive, safe and easy-to-use probes for the detection of nucleic acids are urgently called for. To this end we are in the process of developing a fluorescence-based technique to work in homogeneous assay media. We have examined pyrene and fluorescein as fluorescent labels for natural DNA probes. A fraction of the cytosine residues of a single-stranded cDNA was randomly labelled with either pyrene or fluorescein using the bisulfite-catalyzed diamine reaction. Both fluorophores showed fluorescence quenching when the labelled probe was hybridized with its complementary strand and we describe the changes in steady-state fluorescence intensity that occurred upon hybridization. Our results demonstrate that pyrene quenching is more efficient than fluorescein quenching and thus pyrene-labelled probes are more sensitive for detecting and quantifying DNA from natural sources.


Subject(s)
DNA/analysis , Fluoresceins , Fluorescent Dyes , Pyrenes , Animals , DNA Probes , DNA, Complementary , Glyceraldehyde-3-Phosphate Dehydrogenases/genetics , Nucleic Acid Hybridization , Rats , Sensitivity and Specificity , Temperature
5.
Biochimie ; 79(6): 333-40, 1997 Jun.
Article in English | MEDLINE | ID: mdl-9310182

ABSTRACT

Supplementation of coconut oil to the diet for 1-2 weeks produced a significant hypercholesterolemia in 14-day-old chicks. Changes in plasma fatty acid composition correlated positively with those of diets. In this study, we have shown a different response of low- and high-density lipoprotein (LDL and HDL) fractions to dietary saturated fat (coconut oil) rich in lauric and myristic acids. Although all the components of these particles seemed to increase, the percentages of increases found in total (TC), free (FC) and esterified cholesterol (EC) were higher in LDL than in HDL. TC/phospholipid (PL) ratio, considered as an inverse index of membrane fluidity, also increased with the dietary regimen in LDL, while no significant differences were found in HDL. These results suggest that supplementation of coconut oil to the diet decreased the fluidity of LDL. The EC/triglycerides (TG) ratio was also significantly increased in LDL, corroborating the main atherogenic function of this lipoprotein fraction in response to lauric and myristic acids. We have also estimated the lipidic order parameter, S, from the steady-state fluorescence anisotropy of 1,6-diphenyl-1,3,5-hexatriene (DPH)-labelled low- and high-density lipoproteins. In LDL, temperature dependence of S shows two different behaviour zones at about 20 degrees C. In HDL, the plot of S values versus T is linear. DPH anisotropy and S increased in both LDL and HDL from treated chicks. This increase becomes more evident as temperature rises and also with dietary treatment.


Subject(s)
Cocos , Dietary Fats/administration & dosage , Lipoproteins, HDL/biosynthesis , Lipoproteins, HDL/chemistry , Lipoproteins, LDL/biosynthesis , Lipoproteins, LDL/chemistry , Plant Oils/administration & dosage , Animals , Anisotropy , Chemical Phenomena , Chemistry, Physical , Chickens , Coconut Oil , Lipoproteins/blood , Lipoproteins/chemistry , Lipoproteins, HDL/blood , Lipoproteins, LDL/blood , Male , Plasma/chemistry , Temperature
6.
Acta Crystallogr D Biol Crystallogr ; 53(Pt 3): 321-6, 1997 May 01.
Article in English | MEDLINE | ID: mdl-15299936

ABSTRACT

C-phycocyanin and allophycocyanin from the green alga Spirulina platensis were isolated and crystallized by gel-acupuncture techniques. A novel two-step chromatographic procedure was used for purification. Blue hexagonal crystals were obtained by diffusing magnesium chloride into the protein solution for a week, followed by diffusion of PEG 6000 in order to complete the reduction of the solubility of the protein in the capillary tube used as a growth cell. In the case of allophycocyanin, crystals with a size of 0.4 x 0.3 x 0.3 mm were characterized by X-ray diffraction. They belong to space group P6(3)22 with unit-cell parameters a = b = 102.04, c = 131.22 A. The crystals of C-phycocyanin belong to either space group P6 or P6(3) with unit-cell constants a = b = 182.38, c = 60.87 A, alpha = beta = 90, gamma = 120 degrees. The crystals diffract beyond 2.4 and 2.5 A resolution, respectively, using a rotating anode as an X-ray source.

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