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1.
Cell Rep ; 42(3): 112229, 2023 03 28.
Article in English | MEDLINE | ID: mdl-36906852

ABSTRACT

Intracellular organelles of mammalian cells communicate with one another during various cellular processes. The functions and molecular mechanisms of such interorganelle association remain largely unclear, however. We here identify voltage-dependent anion channel 2 (VDAC2), a mitochondrial outer membrane protein, as a binding partner of phosphoinositide 3-kinase (PI3K), a regulator of clathrin-independent endocytosis downstream of the small GTPase Ras. VDAC2 tethers endosomes positive for the Ras-PI3K complex to mitochondria in response to cell stimulation with epidermal growth factor and promotes clathrin-independent endocytosis, as well as endosome maturation at membrane association sites. With an optogenetics system to induce mitochondrion-endosome association, we find that, in addition to its structural role in such association, VDAC2 is functionally implicated in the promotion of endosome maturation. The mitochondrion-endosome association thus plays a role in the regulation of clathrin-independent endocytosis and endosome maturation.


Subject(s)
Phosphatidylinositol 3-Kinase , Phosphatidylinositol 3-Kinases , Animals , Phosphatidylinositol 3-Kinase/metabolism , Phosphatidylinositol 3-Kinases/metabolism , Voltage-Dependent Anion Channel 2/metabolism , Endosomes/metabolism , Endocytosis , Clathrin/metabolism , Mitochondria/metabolism , Mammals/metabolism
2.
Cell Struct Funct ; 47(1): 43-53, 2022 Jun 25.
Article in English | MEDLINE | ID: mdl-35491102

ABSTRACT

The ongoing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic has threatened human health and the global economy. Development of additional vaccines and therapeutics is urgently required, but such development with live virus must be conducted with biosafety level 3 confinement. Pseudotyped viruses have been widely adopted for studies of virus entry and pharmaceutical development to overcome this restriction. Here we describe a modified protocol to generate vesicular stomatitis virus (VSV) pseudotyped with SARS-CoV or SARS-CoV-2 spike protein in high yield. We found that a large proportion of pseudovirions produced with the conventional transient expression system lacked coronavirus spike protein at their surface as a result of inhibition of parental VSV infection by overexpression of this protein. Establishment of stable cell lines with an optimal expression level of coronavirus spike protein allowed the efficient production of progeny pseudoviruses decorated with spike protein. This improved VSV pseudovirus production method should facilitate studies of coronavirus entry and development of antiviral agents.Key words: severe acute respiratory syndrome coronavirus (SARS-CoV), SARS-CoV-2, pseudovirus, vesicular stomatitis virus (VSV), spike protein.


Subject(s)
Spike Glycoprotein, Coronavirus , Vesicular stomatitis Indiana virus , SARS-CoV-2 , Spike Glycoprotein, Coronavirus/biosynthesis , Vesicular stomatitis Indiana virus/metabolism
3.
J Diabetes Investig ; 13(7): 1134-1139, 2022 Jul.
Article in English | MEDLINE | ID: mdl-35377537

ABSTRACT

Live-cell imaging with fluorescent proteins (FPs) is a powerful tool for investigating the exocytosis processes of hormones. However, the secretion process of glucagon-like peptide-1 (GLP-1) has not been visualized by FPs, which might be because tagging FPs inhibits GLP-1 synthesis through the post-translational processing from proglucagon. Here, we have developed FP-tagged GLP-1 by inserting FPs into the middle of GLP-1 and adding the proglucagon signal peptide. Confocal imaging confirmed that GLP-1 fused to FPs with high folding efficiency showed granular structure, in which secretory vesicle markers colocalized. The fluorescence intensity of FP in the culture supernatant from cells treated with KCl or forskolin was significantly increased compared with those from untreated cells. Furthermore, FP-tagged GLP-1 enables direct visualization of stimulation-dependent exocytosis of GLP-1 at a single granule resolution with total internal reflection fluorescence microscopy. FP-tagged GLP-1 might facilitate the screening of GLP-1 secretagogues and the discovery of new antidiabetic drugs.


Subject(s)
Glucagon-Like Peptide 1 , Secretory Vesicles , Cell Line , Exocytosis , Glucagon-Like Peptide 1/metabolism , Humans , Peptide Fragments , Proglucagon/metabolism , Secretory Vesicles/metabolism
4.
Cell Struct Funct ; 44(2): 195-204, 2019 Dec 26.
Article in English | MEDLINE | ID: mdl-31735741

ABSTRACT

The oncogenic tyrosine kinase BCR-ABL activates a variety of signaling pathways and plays a causative role in the pathogenesis of chronic myelogenous leukemia (CML); however, the subcellular distribution of this chimeric protein remains controversial. Here, we report that BCR-ABL is localized to stress granules and that its granular localization contributes to BCR-ABL-dependent leukemogenesis. BCR-ABL-positive granules were not colocalized with any markers for membrane-bound organelles but were colocalized with HSP90a, a component of RNA granules. The number of such granules increased with thapsigargin treatment, confirming that the granules were stress granules. Given that treatment with the ABL kinase inhibitor imatinib and elimination of the N-terminal region of BCR-ABL abolished granule formation, kinase activity and the coiled-coil domain are required for granule formation. Whereas wild-type BCR-ABL rescued the growth defect in IL-3-depleted Ba/F3 cells, mutant BCR-ABL lacking the N-terminal region failed to do so. Moreover, forced tetramerization of the N-terminus-deleted mutant could not restore the growth defect, indicating that granule formation, but not tetramerization, through its N-terminus is critical for BCR-ABL-dependent oncogenicity. Our findings together provide new insights into the pathogenesis of CML by BCR-ABL and open a window for developing novel therapeutic strategies for this disease.Key words: BCR-ABL, subcellular localization, stress granule.


Subject(s)
Carcinogenesis , Cytoplasmic Granules/enzymology , Fusion Proteins, bcr-abl/metabolism , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/metabolism , Cell Proliferation , Cell Survival , Humans , Optical Imaging , Stress, Physiological , Tumor Cells, Cultured
5.
Cell Struct Funct ; 43(2): 177-185, 2018.
Article in English | MEDLINE | ID: mdl-30404974

ABSTRACT

Glycans, including glycosphingolipids, are broadly expressed in plasma membranes and play important roles in cell-cell interactions. Recently, it has been revealed that glycans participate in the regulation of malignant phenotypes of cancer cells, e.g. growth and invasion. However, their roles in irradiation-tolerant cancer cells have not yet been elucidated. In this study, we show that specific glycosphingolipids are highly expressed in invasive, irradiation-tolerant lung cancer cells. Particularly, the glycosphingolipid GM2 contributes to the development of an invasive phenotype in these lung cancer cells. Our results suggest that glycosphingolipids, including GM2, are implicated in the regulation of invasiveness in irradiation-tolerant lung cancer cells and may therefore serve as potential therapeutic targets for lung cancers following radiotherapy.Key words: glycosphingolipids, GM2, invasion, lung cancer cells, radiotherapy.


Subject(s)
G(M2) Activator Protein/metabolism , Glycosphingolipids/metabolism , Lung Neoplasms/pathology , A549 Cells , Cadherins/metabolism , Cell Movement/radiation effects , Cell Survival/radiation effects , G(M2) Activator Protein/antagonists & inhibitors , G(M2) Activator Protein/genetics , Galactosyltransferases/metabolism , Glycosphingolipids/analysis , Humans , Kaplan-Meier Estimate , Lung Neoplasms/metabolism , Microscopy, Fluorescence , Prognosis , Proportional Hazards Models , RNA Interference , RNA, Small Interfering/metabolism , Radiation, Ionizing , Tandem Mass Spectrometry
6.
Sci Rep ; 8(1): 14054, 2018 09 19.
Article in English | MEDLINE | ID: mdl-30232338

ABSTRACT

Pancreatic ductal adenocarcinoma (PDAC) reportedly progresses very rapidly through the initial carcinogenesis stages including DNA damage and disordered cell death. However, such oncogenic mechanisms are largely studied through observational diagnostic methods, partly because of a lack of live in vitro tumour imaging techniques. Here we demonstrate a simple live-tumour in vitro imaging technique using micro-patterned plates (micro/nanoplates) that allows dynamic visualisation of PDAC microtumours. When PDAC cells were cultured on a micro/nanoplate overnight, the cells self-organised into non-spheroidal microtumours that were anchored to the micro/nanoplate through cell-in-cell invasion. This self-organisation was only efficiently induced in small-diameter rough microislands. Using a time-lapse imaging system, we found that PDAC microtumours actively stretched to catch dead cell debris via filo/lamellipoedia and suction, suggesting that they have a sophisticated survival strategy (analogous to that of starving animals), which implies a context for the development of possible therapies for PDACs. The simple tumour imaging system visualises a potential of PDAC cells, in which the aggressive tumour dynamics reminds us of the need to review traditional PDAC pathogenesis.


Subject(s)
Carcinoma, Pancreatic Ductal/pathology , Cell Culture Techniques/instrumentation , Pancreatic Neoplasms/pathology , Time-Lapse Imaging/methods , Tubulin/metabolism , Animals , Carcinoma, Pancreatic Ductal/metabolism , Cell Line, Tumor , Cell Movement , Cell Proliferation , Cell Survival , Humans , Male , Mice , Microscopy, Fluorescence , Nanostructures , Neoplasm Invasiveness , Neoplasm Transplantation , Pancreatic Neoplasms/metabolism , Phosphatidylserines/metabolism , Signal Transduction , Tumor Cells, Cultured
7.
Plant Cell Physiol ; 57(8): 1610-28, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27335351

ABSTRACT

Nucleotide pyrophosphatase/phosphodiesterases (NPPs) are widely distributed N-glycosylated enzymes that catalyze the hydrolytic breakdown of numerous nucleotides and nucleotide sugars. In many plant species, NPPs are encoded by a small multigene family, which in rice are referred to NPP1-NPP6 Although recent investigations showed that N-glycosylated NPP1 is transported from the endoplasmic reticulum (ER)-Golgi system to the chloroplast through the secretory pathway in rice cells, information on N-glycan composition and subcellular localization of other NPPs is still lacking. Computer-assisted analyses of the amino acid sequences deduced from different Oryza sativa NPP-encoding cDNAs predicted all NPPs to be secretory glycoproteins. Confocal fluorescence microscopy observation of cells expressing NPP2 and NPP6 fused with green fluorescent protein (GFP) revealed that NPP2 and NPP6 are plastidial proteins. Plastid targeting of NPP2-GFP and NPP6-GFP was prevented by brefeldin A and by the expression of ARF1(Q71L), a dominant negative mutant of ADP-ribosylation factor 1 that arrests the ER to Golgi traffic, indicating that NPP2 and NPP6 are transported from the ER-Golgi to the plastidial compartment. Confocal laser scanning microscopy and high-pressure frozen/freeze-substituted electron microscopy analyses of transgenic rice cells ectopically expressing the trans-Golgi marker sialyltransferase fused with GFP showed the occurrence of contact of Golgi-derived membrane vesicles with cargo and subsequent absorption into plastids. Sensitive and high-throughput glycoblotting/mass spectrometric analyses showed that complex-type and paucimannosidic-type glycans with fucose and xylose residues occupy approximately 80% of total glycans of NPP1, NPP2 and NPP6. The overall data strongly indicate that the trans-Golgi compartments participate in the Golgi to plastid trafficking and targeting mechanism of NPPs.


Subject(s)
Glycomics , Oryza/enzymology , Phosphoric Diester Hydrolases/metabolism , Pyrophosphatases/metabolism , ADP-Ribosylation Factor 1/genetics , ADP-Ribosylation Factor 1/metabolism , Amino Acid Sequence , Animals , Brefeldin A/pharmacology , Chloroplasts/metabolism , Chloroplasts/ultrastructure , Endoplasmic Reticulum/metabolism , Endoplasmic Reticulum/ultrastructure , Genes, Reporter , Glycosylation , Golgi Apparatus/metabolism , Golgi Apparatus/ultrastructure , Multigene Family , Oryza/genetics , Oryza/ultrastructure , Phosphoric Diester Hydrolases/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Plastids/metabolism , Plastids/ultrastructure , Protein Transport/drug effects , Pyrophosphatases/genetics , Recombinant Fusion Proteins , Sequence Alignment
8.
Pancreatology ; 16(1): 44-51, 2016.
Article in English | MEDLINE | ID: mdl-26723536

ABSTRACT

OBJECTIVES: The aims of this study were to determine the change in whole-serum N-glycan profile in autoimmune pancreatitis (AIP) patients and to investigate its clinical utility. METHODS: We collected serum from 21 AIP patients before any treatment, and from 60 healthy volunteers (HLTs). Serum glycan profile was measured by comprehensive and quantitative high-throughput glycome analysis. RESULTS: Of the 53 glycans detected, 14 were differentially expressed in AIP patients. Pathway analysis demonstrated that agalactosyl and monogalactosyl bi-antennary glycans were elevated in AIP patients. Among the 14 glycans, #3410, #3510, and #4510 showed high area under receiver operating characteristic (AUROC) values (0.955, 0.964, and 0.968 respectively) for the diagnosis of AIP. These three glycans were mainly bound to immunoglobulin G; however, their serum levels were significantly higher, even in AIP patients who showed lower serum IgG4 levels, than in HLTs. CONCLUSIONS: We demonstrated, for the first time, whole-serum glycan profiles of AIP patients and showed that the levels of glycans #3410, #3510, and #4510 were increased in AIP patients. These glycans might be valuable biomarkers of AIP.


Subject(s)
Autoimmune Diseases/blood , Pancreatitis/blood , Polysaccharides/blood , Aged , Autoimmune Diseases/drug therapy , Autoimmune Diseases/metabolism , Biomarkers/blood , Female , Gene Expression Regulation , Humans , Immunoglobulin G/blood , Male , Middle Aged , Pancreatitis/drug therapy , Pancreatitis/metabolism , Steroids/therapeutic use
9.
Curr Eye Res ; 41(5): 721-4, 2016 05.
Article in English | MEDLINE | ID: mdl-26177396

ABSTRACT

PURPOSE: To investigate the alteration of N-glycans in the vitreous fluid of patients with neovascular glaucoma (NVG) secondary to proliferative diabetic retinopathy (PDR). METHODS: Vitreous samples were collected from 18 patients with PDR (including 7 with NVG and 11 without NVG), and 17 patients without diabetes. Profiles of N-glycans were analyzed by glycoblotting-based high throughput protocol, which we recently developed. Protein levels of vascular endothelial growth factor (VEGF)-A were measured by ELISA. RESULTS: The concentration of total N-glycans and the concentration of N-glycans with sialic acids were significantly higher in NVG group compared with those in non-NVG group or control group, whereas there was no significant difference in concentrations of high-mannose N-glycans among three groups. There was a moderate correlation between the concentrations of sialylated N-glycans and VEGF-A. CONCLUSIONS: Our data demonstrate the distinct changes of N-glycan profile and the increase of sialylated N-glycans in eyes with NVG secondary to PDR.


Subject(s)
Diabetic Retinopathy/complications , Glaucoma, Neovascular/metabolism , Polysaccharides/metabolism , Vascular Endothelial Growth Factor A/metabolism , Vitreous Body/metabolism , Aged , Biomarkers/metabolism , Diabetic Retinopathy/diagnosis , Diabetic Retinopathy/metabolism , Disease Progression , Enzyme-Linked Immunosorbent Assay , Female , Glaucoma, Neovascular/diagnosis , Glaucoma, Neovascular/etiology , Humans , Male , Middle Aged
10.
J Agric Food Chem ; 63(48): 10578-90, 2015 Dec 09.
Article in English | MEDLINE | ID: mdl-26595672

ABSTRACT

Because various stresses strongly influence the food productivity of livestock, biomarkers to indicate unmeasurable environmental stress in domestic animals are of increasing importance. Thermal comfort is one of the basic principles of dairy cow welfare that enhances productivity. To discover sensitive biomarkers that monitor such environmental stresses in dairy cows, we herein performed, for the first time, large-scale glycomics on 336 lactating Holstein cow serum samples over 9 months between February and October. Glycoblotting combined with MALDI-TOF/MS and DMB/HPLC allowed for comprehensive glycomics of whole serum glycoproteins. The results obtained revealed seasonal alterations in serum N-glycan levels and their structural characteristics, such as an increase in high-mannose type N-glycans in spring, the occurrence of di/triantennary complex type N-glycans terminating with two or three Neu5Gc residues in summer and autumn, and N-glycans in winter dominantly displaying Neu5Ac. A multivariate analysis revealed a correlation between the serum expression levels of these season-specific glycoforms and productivity.


Subject(s)
Biomarkers/blood , Cattle/blood , Glycomics , Glycoproteins/blood , Animals , Cattle/genetics , Cattle/immunology , Cattle/physiology , Chromatography, High Pressure Liquid , Female , Glycoproteins/immunology , Lactation , Livestock/blood , Livestock/genetics , Livestock/immunology , Livestock/physiology , Milk/metabolism , Tandem Mass Spectrometry
11.
Sci Rep ; 5: 17342, 2015 Nov 27.
Article in English | MEDLINE | ID: mdl-26611489

ABSTRACT

Many genes and signaling pathways have been found to be involved in cellular senescence program. In the present study, we have identified 16 senescence-associated genes by differential proteomic analysis of the normal human diploid fibroblast cell line, TIG-1, and focused on ATP6V0A2. The aim of this study is to clarify the role of ATP6V0A2, the causal gene for ARCL2, a syndrome of abnormal glycosylation and impaired Golgi trafficking, in cellular senescence program. Here we showed that ATP6V0A2 is critical for cellular senescence; impaired expression of ATP6V0A2 disperses the Golgi structure and triggers senescence, suggesting that ATP6V0A2 mediates these processes. FITC-lectin staining and glycoblotting revealed significantly different glycosylation structures in presenescent (young) and senescent (old) TIG-1 cells; reducing ATP6V0A2 expression in young TIG-1 cells yielded structures similar to those in old TIG-1 cells. Our results suggest that senescence-associated impaired expression of ATP6V0A2 triggers changes in Golgi structure and glycosylation in old TIG-1 cells, which demonstrates a role of ATP6V0A2 in cellular senescence program.


Subject(s)
Fibroblasts/metabolism , Golgi Apparatus/metabolism , Proton-Translocating ATPases/genetics , Carbohydrate Sequence , Cell Line , Cellular Senescence , Fibroblasts/cytology , Gene Expression Profiling , Gene Expression Regulation , Glycosylation , Humans , Molecular Sequence Data , Protein Transport , Proteomics , Proton-Translocating ATPases/antagonists & inhibitors , Proton-Translocating ATPases/metabolism , RNA, Small Interfering/genetics , RNA, Small Interfering/metabolism , Staining and Labeling/methods
12.
Invest Ophthalmol Vis Sci ; 56(9): 5316-22, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26258617

ABSTRACT

PURPOSE: To investigate the alteration of vitreal N-glycans in patients with proliferative diabetic retinopathy (PDR). METHODS: Plasma and vitreous samples were collected from 17 patients (10 females and 7 males) with PDR (PDR group) and 17 nondiabetic patients (8 females and 9 males) with epiretinal membrane (ERM) and idiopathic macular hole (MH) (non-diabetes mellitus [DM] group). Profiles of N-glycans were analyzed by a glycoblotting-based high-throughput protocol that we recently developed. Human retinal microvascular endothelial cells (HRMECs) were cultivated with culture media containing either low glucose (5 mM) or high glucose (25 mM), and expression levels of sialyltransferases were analyzed by real-time PCR and ELISA. RESULTS: Amount of N-glycans in the vitreous fluid of the PDR group was significantly higher than that of the non-DM group (495.5 ± 37.4 vs. 142.7 ± 30.8 pmol/100 µg protein, P < 0.005), whereas there was no significant difference in the plasma samples between the PDR and the non-DM group. In addition, profile analysis showed that N-glycans with sialic acids increased in the vitreous of the PDR group (328.4 ± 25.8 pmol/100 µg protein) compared to the non-DM group (92.1 ± 21.2 pmol/100 µg protein, P < 0.0005). Expression levels of sialyltransferases ST3GAL1 and ST3GAL4 were upregulated in the HRMECs after high-glucose stimulation. Consistent with the real-time PCR data, high-glucose stimulation elevated the protein levels of ST3GAL1 (117.4 ± 14.9 pg/mg, P < 0.01) and ST3GAL4 (6.1 ± 0.9 pg/mg, P < 0.05) in the HRMECs compared with the cells cultured with low-glucose culture media (ST3GAL1, 64.4 ± 5.8 pg/mg; ST3GAL4, 3.8 ± 0.3 pg/mg). CONCLUSIONS: Our data demonstrate distinct changes in the N-glycan profile and an increase in sialylated N-glycans in eyes with PDR.


Subject(s)
Antigens, CD/genetics , Diabetic Retinopathy/genetics , Gene Expression Regulation , Polysaccharides/metabolism , RNA, Messenger/genetics , Sialyltransferases/genetics , Vitreous Body/metabolism , Aged , Antigens, CD/biosynthesis , Cells, Cultured , Diabetic Retinopathy/metabolism , Diabetic Retinopathy/surgery , Enzyme-Linked Immunosorbent Assay , Female , Humans , Male , Middle Aged , Real-Time Polymerase Chain Reaction , Sialyltransferases/biosynthesis , Vitrectomy , Vitreous Body/pathology , beta-Galactoside alpha-2,3-Sialyltransferase
13.
ACS Chem Biol ; 10(9): 2073-86, 2015 Sep 18.
Article in English | MEDLINE | ID: mdl-26107406

ABSTRACT

A novel strategy for the development of a high performance nanoparticules platform was established by means of cell surface mimetic quantum-dots (QDs)-anchored peptides/glycopeptides, which was developed as a model system for nanoparticle-based drug delivery (NDD) vehicles with defined functions helping the specific intracellular trafficking after initial endocytosis. In this paper, we proposed a standardized protocol for the preparation of multifunctional QDs that allows for efficient cellular uptake and rapid escaping from the endolysosomal system and subsequent cytoplasmic molecular delivery to the target cellular compartment. Chemoselective ligation of the ketone-functionalized hexahistidine derivative facilitated both efficient endocytic entry and rapid endolysosomal escape of the aminooxy/phosphorylcholine self-assembled monolayer-coated QDs (AO/PCSAM-QDs) to the cytosol in various cell lines such as human normal and cancer cells, while modifications of these QDs with cell-penetrating arginine-rich peptides showed poor cellular uptake and induced self-aggregation of AO/PCSAM-QDs. Combined use of hexahistidylated AO/PCSAM-QDs with serglycine-like glycopeptides, namely synthetic proteoglycan initiators (PGIs), elicited the entry and controlled intracellular trafficking, Golgi localization, and also excretion of these nanoparticles, which suggested that the present approach would provide an ideal platform for the design of high performance NDD systems.


Subject(s)
Cell-Penetrating Peptides/chemistry , Drug Carriers/chemistry , Endocytosis , Glycopeptides/chemistry , Lysosomes/metabolism , Quantum Dots/chemistry , Amino Acid Sequence , Cell Line , Cell Line, Tumor , Cell-Penetrating Peptides/metabolism , Drug Carriers/metabolism , Glycopeptides/metabolism , Golgi Apparatus/metabolism , Histidine/chemistry , Histidine/metabolism , Humans , Molecular Sequence Data , Oligopeptides/chemistry , Oligopeptides/metabolism , Quantum Dots/metabolism
14.
Pancreatology ; 15(4): 432-8, 2015.
Article in English | MEDLINE | ID: mdl-26052067

ABSTRACT

BACKGROUND/OBJECTIVES: Diagnosing the invasiveness of intraductal papillary mucinous neoplasms (IPMNs) is difficult, especially by blood test. Alterations in serum glycan profiles have been reported for several cancers, but changes in serum glycan profiles have not been investigated in patients with IPMNs. The objectives of this study were to determine the serum N-glycan profile and to investigate its clinical utility in patients with IPMNs. METHODS: We measured serum N-glycan profiles in 79 patients with IPMNs, including 13 invasive IPMNs, by performing comprehensive glycome analysis and assessed the relationship between N-glycan changes and clinical parameters. RESULTS: Seventy glycans were identified and their expression profiles were significantly different depending on the cyst size, the presence of an enhancing solid component, and the histological grade of the IPMN. Nine glycans were highly expressed in patients with invasive IPMNs. The glycan m/z 3195, which is a fucosylated tri-antennary glycan, had the highest diagnostic value for distinguishing invasive IPMNs from non-invasive IPMNs (area under the receiver operating characteristic curve = 0.803). Multivariate analyses revealed high levels of m/z 3195 [odds ratio (OR), 20.5; 95% confidence interval (CI) 2.60-486.4] and the presence of enhancing solid components (OR, 35.8; 95% CI, 5.39-409.6) were significant risk factors for invasive IPMNs. CONCLUSIONS: We performed a comprehensive evaluation of the changes in serum N-glycan profiles in patients with IPMNs for the first time. We determined that increased expression of fucosylated complex-type glycans, especially m/z 3195, is a potential marker for invasive IPMNs.


Subject(s)
Adenocarcinoma, Mucinous/blood , Carcinoma, Pancreatic Ductal/blood , Pancreatic Neoplasms/blood , Polysaccharides/blood , Adenocarcinoma, Mucinous/pathology , Adult , Aged , Aged, 80 and over , Biomarkers, Tumor/blood , Carcinoma, Pancreatic Ductal/pathology , Diagnostic Techniques, Endocrine , Female , Humans , Male , Metabolome , Middle Aged , Neoplasm Invasiveness/pathology , Pancreatic Neoplasms/pathology , Risk Factors
15.
Biochim Biophys Acta ; 1850(9): 1704-18, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25907331

ABSTRACT

BACKGROUND: Huntington's disease (HD) is an autosomal, dominantly inherited and progressive neurodegenerative disease, nosologically classified as the presence of intranuclear inclusion bodies and the loss of GABA-containing neurons in the neostriatum and subsequently in the cerebellar cortex. Abnormal processing of neuronal proteins can result in the misfolding of proteins and altered post-translational modification of newly synthesized proteins. Total glycomics, namely, N-glycomics, O-glycomics, and glycosphingolipidomics (GSL-omics) of HD transgenic mice would be a hallmark for central nervous system disorders in order to discover disease specific biomarkers. METHODS: Glycoblotting method, a high throughput glycomic protocol, and matrix-assisted laser desorption ionization-time of flight/mass spectrometry (MALDI-TOF/MS) were used to study the total glycome expression levels in the brain tissue (3 mice of each sex) and sera (5 mice of each sex) of HD transgenic and control mice. All experiments were performed twice and differences in the expression levels of major glycoforms were compared between HD transgenic and control mice. RESULTS: We estimated the structure and expression levels of 87 and 58N-glycans in brain tissue and sera, respectively, of HD transgenic and control mice. The present results clearly indicated that the brain glycome and their expression levels are significantly gender specific when compared with those of other tissues and serum. Core-fucosylated and bisecting-GlcNAc types of N-glycans were found in increased levels in the brain tissue HD transgenic mice. Accordingly, core-fucosylated and sialic acid (particularly N-glycolylneuraminic acid, NeuGc) for biantennary type glycans were found in increased amounts in the sera of HD transgenic mice compared to that of control mice. Core 3 type O-glycans were found in increased levels in male and in decreased levels in both the striatum and cortexes of female HD transgenic mice. Furthermore, serum levels of core 1 type O-glycans decreased and were undetected for core 2 type O-glycans for HD transgenic mice. In glycosphingolipids, GD1a in brain tissue and GM2-NeuGc serum levels were found to have increased and decreased, respectively, in HD transgenic mice compared to those of the control group mice. CONCLUSION: Total glycome expression levels are significantly different between HD transgenic and control group mice. GENERAL SIGNIFICANCE: Glycoblotting combined with MALDI-TOF/MS total glycomics warrants a comprehensive, effective, novel and versatile technique for qualitative and quantitative analysis of total glycome expression levels. Furthermore, glycome-focused studies of both environmentally and genetically rooted neurodegenerative diseases are promising candidates for the discovery of potential disease glyco-biomarkers in the post-genome era.


Subject(s)
Glycomics , Huntington Disease/metabolism , Animals , Brain/metabolism , Female , Glycosphingolipids/metabolism , Lectins/analysis , Male , Mice , Mice, Transgenic , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
16.
Pancreas ; 44(4): 551-6, 2015 May.
Article in English | MEDLINE | ID: mdl-25875794

ABSTRACT

OBJECTIVES: The objectives of this study were to examine the whole-serum N-glycan profile of patients with unresectable pancreatic cancer and to evaluate the ability of glycans to predict gemcitabine treatment efficacy and patient survival. METHODS: We collected serum from 52 patients with advanced pancreatic cancer before they began gemcitabine monotherapy. The serum glycan profile was measured through comprehensive quantitative high-throughput glycome analysis and compared with the treatment efficacy and patient survival. RESULTS: Of the 61 glycans detected, the serum levels of glycan 4310 (molecular weight [m/z] 1549.566), 6301 (m/z 2032.724), and 9200 (m/z 2010.692) were high in patients with a short time to tumor progression (TTP). Multivariate analysis revealed that a high glycan 9200 concentration was an independent risk factor for shorter TTP (hazard ratio, 2.11; 95% confidence interval, 1.07-4.17) and poor overall survival (hazard ratio, 2.56; 95% confidence interval, 1.08-6.19). The median TTP of patients with up-regulation of 9200 after gemcitabine treatment was shorter than for the remaining patients (91 vs 301 days; P = 0.0005). A similar relationship was observed for overall survival (median, 181 vs 561 days; P = 0.001). CONCLUSIONS: Glycan 9200 is a possible biomarker predicting gemcitabine efficacy survival in patients with unresectable pancreatic cancer.


Subject(s)
Antimetabolites, Antineoplastic/therapeutic use , Biomarkers, Tumor/blood , Carcinoma, Pancreatic Ductal/drug therapy , Deoxycytidine/analogs & derivatives , Glycoproteins/blood , Pancreatic Neoplasms/drug therapy , Polysaccharides/blood , Adult , Aged , Carcinoma, Pancreatic Ductal/blood , Carcinoma, Pancreatic Ductal/mortality , Deoxycytidine/therapeutic use , Female , Follow-Up Studies , Glycosylation , Humans , Male , Middle Aged , Pancreatic Neoplasms/blood , Pancreatic Neoplasms/mortality , Prognosis , Retrospective Studies , Survival Analysis , Gemcitabine
17.
J Gastroenterol Hepatol ; 30(3): 528-34, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25168691

ABSTRACT

BACKGROUND AND AIMS: Serum glycans have been reported to be promising diagnostic markers for many inflammatory diseases and cancers. The aims of this study were to investigate whole glycan expression in patients with non-alcoholic fatty liver diseases and to evaluate the potential use of glycan profiles as new clinical biomarkers to distinguish non-alcoholic steatohepatitis (NASH) from simple steatosis (SS). METHODS: We collected sera from 42 histologically proven NASH and 15 SS patients prior to treatment. Serum glycan profiles were measured by comprehensive, quantitative, high-throughput glycome analysis, and diagnostic values of serum glycans for NASH prediction were examined. RESULTS: Among the 41 serum glycans examined, the expression levels of 8 glycans in NASH were significantly higher than those of SS. Out of these eight glycans, three glycans (m/z 1955, 2032, and 2584) showed high areas under the receiver operating characteristic curve (0.833, 0.863, and 0.866, respectively) for distinguishing NASH from SS. In multivariate analyses with clinical parameters and serum glycans, these three glycans were significant predictive factors for distinguishing NASH from SS. The odds ratio of m/z 1955, 2032, and 2584 were 48.5, 6.46, and 11.8, respectively. These glycans also correlated significantly with lobular inflammation, ballooning, and fibrosis, but not with steatosis. CONCLUSION: We clearly demonstrated whole-serum glycan profiles in NASH patients, and the feasibility of serum glycans (m/z 1955, 2032, and 2584) as new noninvasive biomarkers for distinguishing NASH from SS.


Subject(s)
Fatty Liver/diagnosis , Non-alcoholic Fatty Liver Disease/diagnosis , Polysaccharides/blood , Adolescent , Adult , Aged , Biomarkers/blood , Diagnosis, Differential , Feasibility Studies , Female , Humans , Male , Middle Aged , Predictive Value of Tests , Young Adult
18.
Hepatol Res ; 45(9): 986-993, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25495282

ABSTRACT

AIM: Most of the modification of N-glycosylation reported in cancers including hepatocellular carcinoma (HCC) were based on the examinations of a small number of patients or particular proteins. The aim of this study is to reveal changes in whole serum N-glycan profiles systematically during the process of hepatocarcinogenesis and to elucidate their clinical application. METHODS: We analyzed sera from 105 patients with chronic hepatitis/liver cirrhosis (CH/LC) and age-/sex-matched healthy volunteers (HLT), as well as from 114 patients with HCC. Serum N-glycan profiles were measured comprehensively by a new, quantitative, high-throughput method and compared with clinical parameters. RESULTS: The total amount of N-glycan expression was significantly higher in patients with CH/LC than in HLT; however, no differences were observed between CH/LC and HCC patients. In HCC patients, multi-antennary glycans with fucose residues, particularly m/z 3195, were increased compared with CH/LC patients. The expression of m/z 3195 was high, especially in patients with a high number of intrahepatic lesions (>3), large tumor size (>3 cm), macroscopic vascular invasion or metastasis. The ratio of pairs of glycans on the same path of the biosynthesis pathway (m/z 3195/1914) showed a higher area under the receiver-operator curve of 0.810 than any other single glycan to distinguish HCC from CH/LC. CONCLUSION: We demonstrate the full spectrum of the alterations of serum N-glycans comprehensively in patients with liver disease, and elucidate the possible use of glycans as novel biomarkers of liver disease progression.

19.
Stem Cell Res ; 13(3 Pt A): 454-64, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25460606

ABSTRACT

Alterations in the structure of cell surface glycoforms occurring during the stages of stem cell differentiation remain unclear. We describe a rapid glycoblotting-based cellular glycomics method for quantitatively evaluating changes in glycoform expression and structure during neuronal differentiation of murine induced pluripotent stem cells (iPSCs) and embryonic stem cells (ESCs). Our results show that changes in the expression of cellular N-glycans are comparable during the differentiation of iPSCs and ESCs. The expression of bisect-type N-glycans was significantly up-regulated in neurons that differentiated from both iPSCs and ESCs. From a glycobiological standpoint, iPSCs are an alternative neural cell source in addition to ESCs.


Subject(s)
Embryonic Stem Cells/metabolism , Glycomics , Induced Pluripotent Stem Cells/metabolism , Neurons/metabolism , Polysaccharides/metabolism , Animals , Cell Differentiation , Cells, Cultured , Cerebral Cortex/cytology , Cerebral Cortex/metabolism , Embryonic Stem Cells/cytology , Induced Pluripotent Stem Cells/cytology , Mice , Mice, Inbred C57BL , N-Acetylglucosaminyltransferases/genetics , N-Acetylglucosaminyltransferases/metabolism , Nestin/genetics , Nestin/metabolism , Neurons/cytology , RNA, Messenger/metabolism , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
20.
J Clin Endocrinol Metab ; 99(12): 4616-24, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25222756

ABSTRACT

CONTEXT: Luteal progesterone is fundamental for reproduction, but the molecular regulation of the corpus luteum (CL) in women remains unclear. Galectin-1 and galectin-3 bind to the sugar chains on cells to control key biological processes including cell function and fate. METHODS: The expression and localization of LGALS1 and LGALS3 were analyzed by quantitative PCR and histochemical analysis, with special reference to α2,6-sialylation of glycoconjugates in carefully dated human CL collected across the menstrual cycle and after exposure to human chorionic gonadotrophin (hCG) in vivo. The effects of hCG and prostaglandin E2 on the expression of galectins and an α2,6-sialyltransferase 1 (ST6GAL1) in granulosa lutein cells were analyzed in vitro. RESULTS: Galectin-1 was predominantly localized to healthy granulosa lutein cells and galectin-3 was localized to macrophages and regressing granulosa lutein cells. Acute exposure to luteotrophic hormones (hCG and prostaglandin E2) up-regulated LGALS1 expression (P < .001). ST6GAL1, which catalyzes α2,6-sialylation to block galectin-1 binding, increased during luteolysis (P < .05) as did LGALS3 (P < .05). Luteotrophic hormones reduced ST6GAL1 and LGALS3 in vivo (P < .05) and in vitro (P < .001). There was an inverse correlation between the expression of ST6GAL1 and HSD3B1 (P < .01) and a distinct cellular relationship among α2,6-sialylation, 3ß-hydroxysteroid dehydrogenase, and galectin expression. CONCLUSIONS: Galectin-1 is a luteotrophic factor whose binding is inhibited by α2,6-sialylation in the human CL during luteolysis. ST6GAL1 and galectin-3 expression is increased during luteolysis and associated with a loss of progesterone synthesis. Luteotrophic hormones differentially regulate galectin-1 and galectin-3/α2,6-sialylation in granulosa lutein cells, suggesting a novel galectin switch regulated by luteotrophic stimuli during luteolysis and luteal rescue.


Subject(s)
Corpus Luteum/metabolism , Galectins/metabolism , Glycoconjugates/metabolism , N-Acetylneuraminic Acid/metabolism , Progesterone/metabolism , Adult , Cells, Cultured , Female , Galectin 1/metabolism , Galectin 3/metabolism , Humans , Luteolysis , Oocytes/metabolism
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