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1.
Gene ; 777: 145189, 2021 Apr 20.
Article in English | MEDLINE | ID: mdl-33035618

ABSTRACT

Drosophila nasuta nasuta and Drosophila nasuta albomicans represent cross fertile members of the immigrans species group of Drosophila with an allopatric mode of distribution exhibiting characteristic novelties. Illumina sequencing technology and de novo transcriptome assembling strategies were used for the current study. The analysis revealed 8% of the transcriptome to be differentially expressed between the ovaries of these two species, of which 9% was related to female reproduction. The majority of the differentially expressed genes were enriched for genetic information processing pathways, biosynthesis, and metabolism-related pathways. SNPs in D. n. albomicans transcriptome was double in number than in D. n. nasuta and only 5% of these SNPs were fixed. Ka/Ks ratios indicated the lineages were under strong purifying selection. The genes which are differentially expressed are evolving at a similar rate as that of genes with conserved expression. Thus, the current findings provide useful insights on the expression dynamics during incipient species divergence of D. n. nasuta and D. n. albomicans since their divergence time of ~ 0.5 million years.


Subject(s)
Drosophila/genetics , Ovary/metabolism , Transcriptome/genetics , Animals , Evolution, Molecular , Female , Gene Expression/genetics , Gene Expression Profiling/methods , High-Throughput Nucleotide Sequencing/methods , Hybridization, Genetic/genetics , Karyotyping , Polymorphism, Single Nucleotide/genetics
2.
Genesis ; 51(2): 97-109, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23197370

ABSTRACT

Sex comb is a recently evolved male specific character confined to the Sophophoran group of Drosophila. Such innovations in phenotypes as Waddington proposed, are, outcome of "canalization" in developmental pathways that occur due to mutations creating "choice points" in genetic regulatory pathways. Our interest in the present study is to understand the shifts in genetic network, which has lead to the origin of sex comb from the basic bristle pattern that is seen in rest of the members of Drosophilidae. Here we have made a comparative analysis of expression of some of the key regulators of sex comb morphogenesis, between D. melanogaster and a group of selected species, which primitively lack sex comb. Sex combs reduced (Scr), dachshund (dac), and bric-a-brac (bab) gene expression were studied. We show that, primitive bristle pattern is marked by a strikingly down regulated expression of Sex combs reduced in the first tarsal segment of the prothoracic leg discs of male flies. Further a remarkable change with respect to Dachshund, an activator of sex combs reduced gene in the sex comb regulatory pathway, is seen. This is attributed to changes in DAC protein that might have taken place between the two groups of species. bric-a-brac does not reveal any significant expression modulation between the sex comb bearing and the primitive patterned species. Earlier works had shown that within the Sophophoran group, dynamic changes in SCR expression is responsible for the diversity seen in sex comb morphology, where as no such variation is witnessed with respect to DAC expression. Our findings have demonstrated that the scenario is different between the group primitively lacking sex comb and D. melanogaster wherein an obvious change in the protein has taken place. genesis 51:97-109, 2013, 2013. © 2012 Wiley Periodicals, Inc.


Subject(s)
Drosophila Proteins/genetics , Drosophila melanogaster/anatomy & histology , Sex Characteristics , Transcription Factors/genetics , Amino Acid Sequence , Animals , Biological Evolution , Conserved Sequence , DNA-Binding Proteins/genetics , Drosophila Proteins/metabolism , Drosophila melanogaster/genetics , Gene Expression Regulation, Developmental , Male , Molecular Sequence Data , Nuclear Proteins , Species Specificity
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