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1.
Plant Commun ; : 100891, 2024 Apr 01.
Article in English | MEDLINE | ID: mdl-38561965

ABSTRACT

Plants that grow in extreme environments represent unique sources of stress-resistance genes and mechanisms. Ammopiptanthus mongolicus (Leguminosae) is a xerophytic evergreen broadleaf shrub native to semi-arid and desert regions; however, its drought-tolerance mechanisms remain poorly understood. Here, we report the assembly of a reference-grade genome for A. mongolicus, describe its evolutionary history within the legume family, and examine its drought-tolerance mechanisms. The assembled genome is 843.07 Mb in length, with 98.7% of the sequences successfully anchored to the nine chromosomes of A. mongolicus. The genome is predicted to contain 47 611 protein-coding genes, and 70.71% of the genome is composed of repetitive sequences; these are dominated by transposable elements, particularly long-terminal-repeat retrotransposons. Evolutionary analyses revealed two whole-genome duplication (WGD) events at 130 and 58 million years ago (mya) that are shared by the genus Ammopiptanthus and other legumes, but no species-specific WGDs were found within this genus. Ancestral genome reconstruction revealed that the A. mongolicus genome has undergone fewer rearrangements than other genomes in the legume family, confirming its status as a "relict plant". Transcriptomic analyses demonstrated that genes involved in cuticular wax biosynthesis and transport are highly expressed, both under normal conditions and in response to polyethylene glycol-induced dehydration. Significant induction of genes related to ethylene biosynthesis and signaling was also observed in leaves under dehydration stress, suggesting that enhanced ethylene response and formation of thick waxy cuticles are two major mechanisms of drought tolerance in A. mongolicus. Ectopic expression of AmERF2, an ethylene response factor unique to A. mongolicus, can markedly increase the drought tolerance of transgenic Arabidopsis thaliana plants, demonstrating the potential for application of A. mongolicus genes in crop improvement.

2.
Plant Cell Rep ; 43(3): 81, 2024 Feb 28.
Article in English | MEDLINE | ID: mdl-38418607

ABSTRACT

KEY MESSAGE: Cathepsin B plays an important role that degrades the Rubisco large subunit RbcL in freezing stress. Programmed cell death (PCD) has been well documented in both development and in response to environmental stresses in plants, however, PCD induced by freezing stress and its molecular mechanisms remain poorly understood. In the present study, we characterized freezing-induced PCD and explored its mechanisms in Arabidopsis. PCD induced by freezing stress was similar to that induced by other stresses and senescence in Arabidopsis plants with cold acclimation. Inhibitor treatment assays and immunoblotting indicated that cathepsin B mainly contributed to increased caspase-3-like activity during freezing-induced PCD. Cathepsin B was involved in freezing-induced PCD and degraded the large subunit, RbcL, of Rubisco. Our results demonstrate an essential regulatory mechanism of cathepsin B for Rubisco degradation in freezing-induced PCD, improving our understanding of freezing-induced cell death and nitrogen and carbohydrate remobilisation in plants.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Arabidopsis/metabolism , Cathepsin B/metabolism , Freezing , Ribulose-Bisphosphate Carboxylase/metabolism , Apoptosis , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism
3.
J Integr Plant Biol ; 64(5): 965-978, 2022 May.
Article in English | MEDLINE | ID: mdl-35249253

ABSTRACT

Auxin and auxin-mediated signaling pathways are known to regulate lateral root development. Although exocytic vesicle trafficking plays an important role in recycling the PIN-FORMED (PIN) auxin efflux carriers and in polar auxin transport during lateral root formation, the mechanistic details of these processes are not well understood. Here, we demonstrate that BYPASS1-LIKE (B1L) regulates lateral root initiation via exocytic vesicular trafficking-mediated PIN recycling in Arabidopsis thaliana. b1l mutants contained significantly more lateral roots than the wild type, primarily due to increased lateral root primordium initiation. Furthermore, the auxin signal was stronger in stage I lateral root primordia of b1l than in those of the wild type. Treatment with exogenous auxin and an auxin transport inhibitor indicated that the lateral root phenotype of b1l could be attributed to higher auxin levels and that B1L regulates auxin efflux. Indeed, compared to the wild type, C-terminally green fluorescent protein-tagged PIN1 and PIN3 accumulated at higher levels in b1l lateral root primordia. B1L interacted with the exocyst, and b1l showed defective PIN exocytosis. These observations indicate that B1L interacts with the exocyst to regulate PIN-mediated polar auxin transport and lateral root initiation in Arabidopsis.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Biological Transport , Indoleacetic Acids/metabolism , Plant Roots/metabolism
4.
BMC Plant Biol ; 20(1): 332, 2020 Jul 14.
Article in English | MEDLINE | ID: mdl-32664862

ABSTRACT

BACKGROUND: Cold stress inhibits normal physiological metabolism in plants, thereby seriously affecting plant development. Meanwhile, plants also actively adjust their metabolism and development to adapt to changing environments. Several cold tolerance regulators have been found to participate in the regulation of plant development. Previously, we reported that BYPASS1-LIKE (B1L), a DUF793 family protein, participates in the regulation of cold tolerance, at least partly through stabilizing C-REPEAT BINDING FACTORS (CBFs). In this study, we found that B1L interacts with TRANSTHYRETIN-LIKE (TTL) protein, which is involved in brassinosteroid (BR)-mediated plant growth and catalyses the synthesis of S-allantoin, and both proteins participate in modulating plant growth and cold tolerance. RESULTS: The results obtained with yeast two hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays showed that B1L directly interacted with TTL. Similar to the ttl-1 and ttl-2 mutants, the b1l mutant displayed a longer hypocotyl and greater fresh weight than wild type, whereas B1L-overexpressing lines exhibited a shorter hypocotyl and reduced fresh weight. Moreover, ttl-1 displayed freezing tolerance to cold treatment compared with WT, whereas the b1l mutant and TTL-overexpressing lines were freezing-sensitive. The b1l ttl double mutant had a developmental phenotype and freezing tolerance that were highly similar to those of ttl-1 compared to b1l, indicating that TTL is important for B1L function. Although low concentrations of brassinolide (0.1 or 1 nM) displayed similarly promoted hypocotyl elongation of WT and b1l under normal temperature, it showed less effect to the hypocotyl elongation of b1l than to that of WT under cold conditions. In addition, the b1l mutant also contained less amount of allantoin than Col-0. CONCLUSION: Our results indicate that B1L and TTL co-regulate development and cold tolerance in Arabidopsis, and BR and allantoin may participate in these processes through B1L and TTL.


Subject(s)
Allantoin/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis/genetics , Brassinosteroids/metabolism , Intracellular Signaling Peptides and Proteins/metabolism , Membrane Proteins/metabolism , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Cold Temperature , Freezing , Hypocotyl/genetics , Hypocotyl/growth & development , Intracellular Signaling Peptides and Proteins/genetics , Membrane Proteins/genetics , Mutation , Prealbumin/genetics , Prealbumin/metabolism , Stress, Physiological , Two-Hybrid System Techniques
5.
Environ Sci Pollut Res Int ; 27(14): 17339-17349, 2020 May.
Article in English | MEDLINE | ID: mdl-32157543

ABSTRACT

One of the most important ecological processes is the formation of interspecific relationships in relation to spatial patterns among alpine cushion plants in extreme environmental habitats. However, such relationships remain poorly understood. Here, we examined the spatial patterns of alpine cushion plants along an altitudinal gradient of environmental severity and the interspecific relationship between two cushion species (Thylacospermum caespitosum and Androsace tangulashanensis) on the eastern Kunlun Mountain of China. Our results showed that the two species were highly aggregated within a distance of 2.5-5 m at the mid (S2) altitude, whereas they were randomly distributed at the low (S1) and high (S3) altitudes. A positive spatial interaction between the two species was observed over shorter distances at the mid (S2) altitude, and the spatial patterns were related to the size of individuals of the two species. Moreover, the impact of A. tangulashanensis on T. caespitosum (RIIT. caespitosum) was negative in all the study plots, and a positive impact of T. caespitosum on A. tangulashanensis (RIIA. tangulashanensis) was only observed at the mid (S2) altitude. Together, these results demonstrated that the spatial patterns of these two cushions varied with environmental severity, since the outcome of the interactions were different, to some extent, at the three altitudes. Plant size is the main factor affecting the spatial correlation and interspecific relationship between two cushions. Therefore, its potential influence should be considered when discussing interspecific relationships among cushions and their community construction at small scales in alpine ecosystems.


Subject(s)
Caryophyllaceae , Ecosystem , Altitude , China , Plants
6.
Front Plant Sci ; 10: 807, 2019.
Article in English | MEDLINE | ID: mdl-31297122

ABSTRACT

The C-REPEAT BINDING FACTOR signaling pathway is strictly modulated by numerous factors and is essential in the cold response of plants. Here, we show that the DUF793 family gene BYPASS1-LIKE modulates freezing tolerance through the CBFs in Arabidopsis. The expression of B1L was rapidly induced under cold treatment. Comparing to wild type, B1L knockout mutants were more sensitive to freezing treatment, whereas B1L-overexpressing lines were more tolerant. The expression of CBFs and CBF target genes was significantly decreased in b1l mutant. Using yeast two-hybrid screening system, 14-3-3λ was identified as one of proteins interacting with B1L. The interaction was confirmed with bimolecular fluorescence complementation assay and co-immunoprecipitation assay. Biochemical assays revealed that b1l mutation promoted the degradation of CBF3 compared to wild type, whereas 14-3-3κλ mutant and b1l 14-3-3κλ mutant suppressed the degradation of CBF3. Consistently, 14-3-3κλ and b1l 14-3-3κλ mutants showed enhanced freezing tolerance compared to wild type. These results indicate that B1L enhances the freezing tolerance of plants, at least partly through stabilizing CBF. Our findings improve our understanding of the regulation of CBF in response to cold stress.

7.
Int J Phytoremediation ; 21(1): 4-13, 2019.
Article in English | MEDLINE | ID: mdl-30638050

ABSTRACT

A field experiment in which a hyperaccumulator (Arabis alpina) was intercropped with winter crop (Vicia faba), was conducted to understand effect of the root exudates on the content and accumulated amounts, sub-cellular distribution of Cd and Pb of the intercropped plants during the ripening period of V. faba (120 d after sowing). The results showed that contents of soluble sugars exuded from the roots of intercropped A. alpina were 67.6% less than that of the monocropped plant, whereas contents of free amino acids was 57.9% greater. The total contents of organic acids exuded from roots of intercropped A. alpina and V. faba were 578.8% and 37.8% greater than that of monocropped plants, respectively. The contents of tartaric acid and malic acid exuded by roots of intercropped A. alpina were greater 31.9 times and 15.9 times than those of monocropped A. alpina, respectively. The contents and accumulated amounts of Cd and Pb in intercropped A. alpina were greater than those of monocropped A. alpina. The contents of Pb bound to organic matter in cell walls, cytoplasm and organelles of intercropped plants were greater than those of monocropped plants. These results demonstrate that increases in accumulated amounts of Pb and Cd caused by intercropping were closely related to migration of Cd and Pb in plants mediated by the composition and content of the root exudates.


Subject(s)
Arabis , Vicia faba , Biodegradation, Environmental , Cadmium , Lead , Plant Roots , Triticum
8.
Int J Clin Exp Pathol ; 12(4): 1295-1304, 2019.
Article in English | MEDLINE | ID: mdl-31933943

ABSTRACT

The androgen receptor (AR) plays a pivotal role in prostate cancer, making it a potential therapeutic target. Short-hairpin RNA (shRNA) inhibits gene expression and offers a novel strategy to eradicate disease. Ultrasound-mediated gene transfection is a promising gene delivery method. This study sought to determine whether targeting silencing androgen receptor gene by shRNA with low-intensity focused ultrasonic irradiation could be used as effective therapy for prostate cancers in vivo. A plasmid-based short-hairpin RNA combined with low-intensity focused ultrasonic irradiation approach was used to specifically knock down the expression of AR in prostate cancer 22RV1 cells in vivo. The growth of 22RV1 tumors that had been subcutaneously xenografted was evaluated and expression level of AR was determined by immunohistochemical staining. The proliferative index (PI) and the apoptotic index (AI) were respectively derived from the percentage of positive cells by Ki-67 immunohistochemical staining and TUNEL assay. The plasmid-based AR shRNA administrated intravenously significantly inhibited the tumor growth and AR expression. These inhibitory effects of AR shRNA were augmented when the region of tumor received low-intensity focused ultrasound irradiation. Immunohistochemical staining and TUNEL assay confirmed AR shRNA with low-intensity focused ultrasonic irradiation exhibited growth-inhibitory, antiproliferative, and apoptotic effects on prostate cancer xenografts. The authors showed for the first time that the knockdown of AR expression by plasmid-based AR shRNA with low-intensity focused ultrasonic irradiation significantly suppressed the tumor growth of prostate cancer in vivo.

9.
Int J Syst Evol Microbiol ; 69(2): 397-403, 2019 Feb.
Article in English | MEDLINE | ID: mdl-30543508

ABSTRACT

A Gram-stain-positive, aerobic, non-motile and mycolic-acid-containing strain, designated Y48T, was isolated from soil contaminated by crude oil located in the northern margin of the Qaidam Basin. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain Y48T belongs to the genus Nocardia and is closely related to N. cummidelens DSM 44490T (99.0 % similarity), N. soli DSM 44488T (99.0 %), N. lasii 3C-HV12T (98.9 %), N. salmonicida NBRC 13393T (98.6 %), N. ignorata NBRC 108230T (98.6 %) and N. coubleae NBRC 108252T (98.6 %). The average nucleotide identity and DNA-DNA hybridization values between strain Y48T and the reference strains were 75.9-84.5 and 27.5-29.0 %, respectively, values that were below the thresholds for species delineation. Chemotaxonomic analysis indicated that the major fatty acids of strain Y48T were C16 : 0, summed feature 3 (C16 : 1ω6c/C16 : 1ω7c), C18 : 1ω9c and C18 : 0 10-methyl (TBSA). The respiratory quinone was MK-8(H4, ω-cycl). The polar lipid profile was composed of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol mannoside, two glycolipids and three unidentified lipids. The cell-wall hydrolysates contained meso-diaminopimelic acid, with ribose, arabinose, glucose and galactose as whole-cell sugars. A combination of 16S rRNA gene sequence analysis, and phenotypic and chemotaxonomic characterizations demonstrated that strain Y48T represents a novel species of the genus Nocardia, for which the name Nocardia mangyaensis sp. nov. is proposed. The type strain is Y48T (=JCM 32795T=CGMCC 4.7494T).


Subject(s)
Nocardia/classification , Petroleum Pollution , Phylogeny , Soil Microbiology , Bacterial Typing Techniques , Base Composition , DNA, Bacterial/genetics , Diaminopimelic Acid/chemistry , Fatty Acids/chemistry , Nocardia/isolation & purification , Nucleic Acid Hybridization , Petroleum , Phospholipids/chemistry , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Soil Pollutants , Tibet , Vitamin K 2/analogs & derivatives , Vitamin K 2/chemistry
10.
Environ Sci Pollut Res Int ; 25(29): 28998-29005, 2018 Oct.
Article in English | MEDLINE | ID: mdl-30109682

ABSTRACT

As alpine plants, cushion species are particularly susceptible to environment changes. Thus, understanding population structure and community diversity variation of cushion plants along elevational gradients is crucial for estimating their response to predicted climate changes. In this study, Thylacospermum caespitosum populations from three elevations (low, medium, and high) in three climate zones of China (the Kunlun, Qilian, and Tianshan Mountains) were selected to evaluate the effect of elevation on the structure of T. caespitosum populations and species diversity of cushion communities. Results showed that elevation substantially influenced T. caespitosum populations (size structure, density, and death rate), as well as richness (α-diversity) and microhabitat species pool (species pool) of cushion communities. In the low elevations, T. caespitosum populations were in decline due to a lower ratio of small plants and higher mortality compared with populations at medium and high elevations. The α-diversity and species pool in cushion communities were significantly increased with decreased elevation, but the importance value of T. caespitosum decreased accordingly. Moreover, there was a significant positive correlation between elevation and relative importance value (the importance of one species in the community) of T. caespitosum (r = 0.883; P < 0.01). Elevation was significantly negatively correlated with the mortality rate of T. caespitosum (r = - 0.855; P < 0.01), α-diversity (r = - 0.933; P < 0.001), and species pool (r = - 0.885; P < 0.01). The declining characters of T. caespitosum population structure were obvious in low elevation populations. This decline may directly or indirectly relate to environmental change. Effects of elevation can provide an early indication of range contractions and population declines of cushion species with future climate warming. We call for more mechanistic studies of climate change impacts on cushion populations, particularly in alpine systems near the snow line.


Subject(s)
Caryophyllaceae/physiology , Altitude , Biodiversity , China , Climate Change , Ecosystem , Plants
11.
Ying Yong Sheng Tai Xue Bao ; 24(7): 2049-55, 2013 Jul.
Article in Chinese | MEDLINE | ID: mdl-24175539

ABSTRACT

Photosynthesis is one of the vital physiological processes easily affected by environmental changes. As a plant group growing in specific low temperature and strong irradiance environment, the photosynthetic apparatus of alpine plants have developed special morphologically and physiologically mechanisms in adapting to this extreme adverse environment. However, due to the high heterogeneity of habitats, there exist great differences in the photo-protection and adaptation mechanisms among different alpine plants. This paper reviewed the recent researches about the morphology and ultramicro-anatomical structure of the chloroplasts in photosynthetic apparatus of alpine plants and the photo-protection and adaptation mechanisms of the plants, and proposed the further research directions on the physiological adaptation of the photosynthesis of alpine plants.


Subject(s)
Adaptation, Physiological , Photosynthesis/physiology , Plant Physiological Phenomena , Stress, Physiological , Altitude , Chloroplasts/diagnostic imaging , Cold Temperature , Ecosystem , Plant Development , Plants/anatomy & histology , Ultrasonography
12.
Gene ; 515(1): 208-13, 2013 Feb 15.
Article in English | MEDLINE | ID: mdl-23228853

ABSTRACT

ΔNp73 has emerged as an interesting novel factor in cancer research. Here, we report the effect of carbon-ion beams on ΔNp73 expression in human cervix carcinoma HeLa cells in contrast to the effect of X-rays. Cellular sensitivities were determined by colony formation. Radiation-induced cell cycle arrest was investigated with flow cytometry. Additionally, radiation-induced apoptosis was analyzed with flow cytometry and Hoechst staining. Furthermore, ΔNp73 expression was examined by semi-quantitative reverse transcription-PCR (semi-quantitative RT-PCR) as well as by Western blot analysis. Following irradiation, stronger G2/M phase arrest, more significant increase in apoptosis and more pronounced ΔNp73 degradation were observed after exposure to high-LET carbon beams in comparison with X-rays at 4 Gy doses. These observations indicate that there is a differential ΔNp73 expression in response to different LET radiations, and down-regulated ΔNp73 expression might play a critical role in promoting cycle arrest and apoptosis in cancer cells. This study highlights the potential of ΔNp73 in radiotherapy.


Subject(s)
Apoptosis/radiation effects , DNA-Binding Proteins/genetics , Gene Expression Regulation, Neoplastic/radiation effects , Linear Energy Transfer , Nuclear Proteins/genetics , Tumor Suppressor Proteins/genetics , Apoptosis/genetics , Cell Cycle Checkpoints/radiation effects , Cell Survival/radiation effects , DNA-Binding Proteins/metabolism , Female , HeLa Cells , Humans , Nuclear Proteins/metabolism , Tumor Protein p73 , Tumor Suppressor Proteins/metabolism , X-Rays/adverse effects
13.
World J Microbiol Biotechnol ; 28(8): 2713-21, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22806197

ABSTRACT

A trehalose-6-phosphate phosphatase (TPP) gene, otsB, from a psychrotrophic bacterium, Arthrobacter strain A3, was identified. The product of this otsB gene is 266 amino acids in length with a calculated molecular weight of 27,873 Da. The protein was expressed in Escherichia coli and purified to apparent homogeneity. The purified recombinant TPP catalyzed the dephosphorylation of trehalose-6-phosphate to form trehalose and showed a broad optimum pH range from 5.0 to 7.5. This enzyme also showed an absolute requirement for Mg(2+) or Co(2+) for catalytic activity. The recombinant TPP had a maximum activity at 30 °C and maintained activity over a temperature range of 4-30 °C. TPP was generally heat-labile, losing 70 % of its activity when subjected to heat treatment at 50 °C for 6 min. Kinetic analysis of the Arthrobacter strain A3 TPP showed ~tenfold lower K (m) values when compared with values derived from other bacterial TPP enzymes. The highest k (cat)/K (m) value was 37.5 mM(-1) s(-1) (repeated three times), which is much higher than values published for mesophilic E. coli TPP, indicating that the Arthrobacter strain A3 TPP possessed excellent catalytic activity at low temperatures. Accordingly, these characteristics suggest that the TPP from the Arthrobacter strain A3 is a new cold-adapted enzyme. In addition, this is the first report characterizing the enzymatic properties of a TPP from a psychrotrophic organism.


Subject(s)
Arthrobacter/enzymology , Arthrobacter/genetics , Phosphoric Monoester Hydrolases/genetics , Phosphoric Monoester Hydrolases/metabolism , Amino Acid Sequence , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Base Composition , Cloning, Molecular , Cold Temperature , DNA, Bacterial/genetics , Enzyme Stability , Genes, Bacterial , Hydrogen-Ion Concentration , Kinetics , Molecular Sequence Data , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Homology, Amino Acid , Sugar Phosphates/metabolism , Trehalose/analogs & derivatives , Trehalose/metabolism
14.
Gene ; 506(1): 150-5, 2012 Sep 10.
Article in English | MEDLINE | ID: mdl-22771916

ABSTRACT

Disease-induced polygalacturonase-inhibiting proteins (PGIPs) are the major defense proteins which play an important role in resistance to infection of pathogens. To date, the AtPGIP expression in Arabidopsis induced by Stemphylium solani (S. solani) was not described. Here the distribution of AtPGIPs and their expression induced by S. solani infection in Arabidopsis was reported. Notably, immunofluorescence localization showed that the AtPGIPs were distributed in leaves, petioles, stems and roots of 5 week old Arabidopsis, but they were mainly localized in epidermis, vascular bundles and vascular cylinder. Further studies indicated that the transcription level of AtPGIP1 and AtPGIP2 was both up-regulated in response to infection with S. solani which caused hypersensitive cell death, but the transcription level of AtPGIP2 was less induced than AtPGIP1. Consistently, the bulk AtPGIPs of Arabidopsis showed a higher activity in leaves infected by S. solani. Taken together, our preliminary results showed that AtPGIPs were spatially distributed and AtPGIP expression might take part in resistance to infection of S. solani. This study might highlight the potential importance of AtPGIPs and plant disease resistance.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Arabidopsis/genetics , Arabidopsis/metabolism , Ascomycota/pathogenicity , Arabidopsis/microbiology , Base Sequence , DNA, Plant/genetics , Genes, Plant , Host-Pathogen Interactions/genetics , Host-Pathogen Interactions/physiology , Microscopy, Fluorescence , Plant Diseases/genetics , Plant Diseases/microbiology , Tissue Distribution , Up-Regulation
15.
Extremophiles ; 15(4): 499-508, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21630027

ABSTRACT

Trehalose is a chemical chaperone known to protect a variety of organisms against cold stress. Members of the genus Arthrobacter, which belongs to the Actinomycetales group, exhibit strong resistance to stress conditions, but exactly how trehalose synthesis is regulated in conditions of cold stress is still unknown. Here, we report that Arthrobacter strain A3, which was isolated from the alpine permafrost, has only two trehalose synthesis pathways (OtsA/B and TreS), while other Arthrobacter spp. have three. Mutants and immunoblot analyses indicate that trehalose is mainly synthesized via OtsA at low temperatures in Arthrobacter strain A3. Therefore, we have focused on the regulation of OtsA expression during cold shock. The results indicated that both low temperature and accumulation of trehalose can inhibit OtsA expression. The elongation factor Tu, which binds to OtsA, stabilizes the expression of OtsA in the cold.


Subject(s)
Arthrobacter/enzymology , Bacterial Proteins/biosynthesis , Cold-Shock Response/physiology , Gene Expression Regulation, Bacterial/physiology , Gene Expression Regulation, Enzymologic/physiology , Glucosyltransferases/biosynthesis , Trehalose/biosynthesis
16.
Curr Microbiol ; 62(3): 923-32, 2011 Mar.
Article in English | MEDLINE | ID: mdl-21061126

ABSTRACT

This study first described the composition and characteristics of culturable endophytic bacteria isolated from wild alpine-subnival plant species growing under extreme environmental conditions (i.e., on the border of a glacier with frequently fluctuating and freezing temperatures, strong wind, and high ultraviolet radiation). Using a cultivation-dependent approach and 16S rRNA gene amplification techniques, 93 bacterial isolates showing different phenotypic properties were obtained from 20 different subnival plant species, of which gram-positive bacteria (61.5%), psychrotolerant bacteria (67.3%), and pigmented isolates (70.9%) accounted for a large proportion. All these characteristics of endophytes were closely related to the survival environment of their host plants and were in good agreement with microbes occurring in other cold environments. Phylogenetic analysis indicated that the endophytic isolates consisted of five phylogenetic groups comprising α-proteobacteria, γ-proteobacteria, the high G+C content gram-positive bacteria, the low G+C content gram-positive bacteria, and Flavobacterium-Bacteroides-Cytophaga. The largest generic diversity was found in the HGC group, while Clavibacter, Agreia, Rhodococcus, Sphingomonas, and Pseudomonas were the most prevalent genera. Of all isolates, 46.4% showed a high sequence similarity (98-100%) to strains discovered from other cold environments such as glaciers, tundra, and polar seas. Furthermore, 36.4% of the isolates produced Indole-3-acetic acid and 76.3% were able to solubilize mineral phosphate, which revealed that endophytic bacteria with multiple physiological functions were abundant and widespread in subnival plants. These results are essential for understanding the ecological roles of endophytes and as a foundation for further studying the interactions with plants and environment.


Subject(s)
Bacteria/classification , Bacteria/isolation & purification , Biodiversity , Plants/microbiology , Bacteria/genetics , Bacteria/growth & development , Bacterial Load , China , Cluster Analysis , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Molecular Sequence Data , Phylogeny , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA
17.
Physiol Plant ; 141(2): 141-51, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21044086

ABSTRACT

Endophytic bacteria have been shown to increase resistance against biotic stress and tolerance to abiotic stress in many plants. The objective of this study was to evaluate the effect of an endophytic bacterium, Clavibacter sp. strain Enf12, in regenerated plantlets of Chorispora bungeana subjected to chilling stress (0°C). Aerial biomass and physiological markers for chilling stress, such as electrolyte leakage, lipid peroxidation, reactive oxygen species (ROS) accumulation, proline content and activities of superoxide dismutase (EC 1.15.1.1), catalase (EC 1.11.1.6), guaiacol peroxidase (EC 1.11.1.7) and ascorbate peroxidase (EC 1.11.1.11), were assessed. We demonstrated that Clavibacter sp. strain Enf12 was capable of colonizing internal tissues of regenerated plantlets of C. bungeana and maintained stable population densities under both normal (20°C) and chilling (0°C) conditions. Inoculation enhanced plantlet growth under both conditions and significantly attenuated the chilling-induced electrolyte leakage, lipid peroxidation and ROS accumulation. The endophyte significantly increased the activities of antioxidant enzymes and proline content in C. bungeana plantlets under chilling stress. These findings suggest that Clavibacter sp. strain Enf12 inoculation stimulates the growth of C. bungeana plantlets and improves their tolerance to chilling stress through enhancing the antioxidant defense system.


Subject(s)
Actinomycetales/physiology , Brassicaceae/microbiology , Brassicaceae/physiology , Actinomycetales/growth & development , Antioxidants/metabolism , Brassicaceae/metabolism , Cold Temperature , Lipid Peroxidation/physiology , Reactive Oxygen Species/metabolism
18.
Arch Microbiol ; 192(11): 937-43, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20838774

ABSTRACT

The enzyme OtsA (trehalose-6-phosphate synthase) is ubiquitous in both prokaryotic and eukaryotic organisms, where it plays a critical role in stress resistance and glucose metabolism. Here, we cloned the otsA gene from Arthrobacter sp. Cjts, and expressed and then purified the recombinant proteins. Enzyme activity analysis indicated that the high catalytic efficiency of OtsA from Arthrobacter sp. Cjts resulted from the high affinity of the enzyme for uridine 5'-diphosphoglucose (UDP-Glc) at low temperatures. We also confirmed that the N-loop sequence of OtsA has a large effect on its affinity for UDP-Glc. Sequence analysis indicated that the flexibility of the N-loop may be directly related to the catalytic efficiency of OtsA at low temperatures.


Subject(s)
Arthrobacter/genetics , Bacterial Proteins/metabolism , Cold Temperature , Glucosyltransferases/metabolism , Uridine Diphosphate Glucose/metabolism , Amino Acid Sequence , Arthrobacter/enzymology , Bacterial Proteins/genetics , Cloning, Molecular , Genes, Bacterial , Glucosyltransferases/genetics , Molecular Sequence Data , Recombinant Proteins/genetics , Recombinant Proteins/metabolism
19.
Ying Yong Sheng Tai Xue Bao ; 20(5): 1085-91, 2009 May.
Article in Chinese | MEDLINE | ID: mdl-19803164

ABSTRACT

With the combination of root staining and PCR-DGGE, the seasonal variation of arbuscular mycorrhizal fungi (AMF) in Caragana korshinskii roots was investigated; and by the methods of principal component analysis and canonical correspondence analysis, the relationships between this variation and soil factors were analyzed. It was found that the total infection rate of AMF and the infection rates of arbuscules and vesicles in C. korshinskii roots as well as the spore density of AMF in soil varied significantly among seasons. From spring to autumn, the total infection rate of AMF had a decreasing trend, whereas the other three indicators were in adverse. A total of nine AMF phylotypes were detected in spring, summer, and autumn, but the community composition and diversity indices of AMF had definite differences among the seasons. The infection rate of vesicles decreased with increasing soil total N, P, and organic C, while the spore density of AMF increased with decreasing soil moisture and available P. The seasonal variation of AMF community composition in C. korshinskii roots was mainly affected by soil total P, available P, and organic C.


Subject(s)
Caragana/microbiology , Mycorrhizae/growth & development , Phosphorus/analysis , Plant Roots/microbiology , Soil/analysis , Carbon/analysis , Nitrogen/analysis , Principal Component Analysis , Seasons
20.
Physiol Plant ; 136(3): 310-23, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19453498

ABSTRACT

Different defense mechanisms of three spring wheat (Triticum aestivum L.) varieties were studied by withholding watering in well-watered pots to gradually increase water deficit of plants grown in containers. The strategies of plant adaptation were divided into three phases according to the severity of drought: first, a positive defense phase that started from commencement of non-hydraulic root-sourced signals (nHRS) and ended at onset of hydraulic root-sourced signals (HRS)--the plant responded to imminent drought by decreasing stomatal aperture to lessen water loss and no membrane injury occurred. The second defense phase occurred between the onset of HRS and temporary wilting (TW), characterized by enhancement of reactive oxygen species (ROS), marked enzyme activity and increased MDA content. Mild lipid membrane peroxidation came mainly from a dynamic imbalance between free radical production and enzymatic defense reaction, which indicated that injury by ROS had not been completely repaired by increasing enzymatic activity. The third defense phase was from TW to permanent wilting (PW), the synthesis of SOD and CAT during TW could not deal with the collapse of antioxidant enzymes, and SOD and CAT activities began to decrease, which caused the excessive ROS production and thus serious membrane lipid peroxidation. The defense strategies to drought are similar among the varieties, but modern varieties LC8275 and GY602 bred after 1975 had relatively higher defense levels at all three defense phases, which suggest that modern varieties are more resistant than old ones, and artificial selection would lead to a different direction in evolution from natural selection.


Subject(s)
Adaptation, Physiological , Droughts , Soil , Triticum/physiology , Catalase/metabolism , Lipid Peroxidation , Plant Roots/physiology , Plant Stomata/physiology , Plant Transpiration/physiology , Reactive Oxygen Species/metabolism , Superoxide Dismutase/metabolism , Triticum/enzymology , Water/physiology
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