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1.
Plant Physiol ; 181(2): 471-479, 2019 10.
Article in English | MEDLINE | ID: mdl-31366720

ABSTRACT

Rubisco catalyzes the fixation of CO2 into organic compounds that are used for plant growth and the production of agricultural products, and specific sugar-phosphate derivatives bind tightly to the active sites of Rubisco, locking the enzyme in a catalytically inactive conformation. 2-carboxy-d-arabinitol-1-phosphate phosphatase (CA1Pase) dephosphorylates such tight-binding inhibitors, contributing to the maintenance of Rubisco activity. Here, we investigated the hypothesis that overexpressing ca1pase would decrease the abundance of Rubisco inhibitors, thereby increasing the activity of Rubisco and enhancing photosynthetic performance and productivity in wheat (Triticum aestivum). Plants of four independent wheat transgenic lines overexpressing ca1pase showed up to 30-fold increases in ca1pase expression compared to the wild type. Plants overexpressing ca1pase had lower numbers of Rubisco tight-binding inhibitors and higher Rubisco activation state than the wild type; however, there were 17% to 60% fewer Rubisco active sites in the four transgenic lines than in the wild type. The lower Rubisco content in plants overexpressing ca1pase resulted in lower initial and total carboxylating activities measured in flag leaves at the end of the vegetative stage and lower aboveground biomass and grain yield measured in fully mature plants. Hence, contrary to what would be expected, ca1pase overexpression decreased Rubisco content and compromised wheat grain yields. These results support a possible role for Rubisco inhibitors in protecting the enzyme and maintaining an adequate number of Rubisco active sites to support carboxylation rates in planta.


Subject(s)
Phosphoric Monoester Hydrolases/metabolism , Ribulose-Bisphosphate Carboxylase/metabolism , Triticum/enzymology , Biomass , Plants, Genetically Modified , Ribulose-Bisphosphate Carboxylase/antagonists & inhibitors , Triticum/genetics , Triticum/growth & development
2.
Food Energy Secur ; 8(2): e00147, 2019 May.
Article in English | MEDLINE | ID: mdl-31244999

ABSTRACT

Ensuring food security in a changing climate is a major contemporary challenge and requires development of climate-resilient crops that perform well under variable environments. The hypothesis that yield stability in suboptimal conditions is linked to yield penalties in optimal conditions was investigated in field-grown wheat in the UK. The phenotypic responses, rate of wheat crop development, and final grain yield to varying sowing date, rainfall, air temperature, and radiation patterns were studied for a panel of 61 elite commercial wheat cultivars grown in the UK in 2012, 2013, and 2014. Contrasting climatic patterns, particularly rainfall accumulation and distribution over the season, influenced the relative performance of the cultivars affecting the duration of grain development stage and impacting on productivity. Indices for crop productivity, yield stability, and performance under suboptimal conditions revealed four cultivars with a combination of stable and high relative grain yields over the three seasons: Gladiator, Humber, Mercato, and Zebedee. Genetic similarity between cultivars partially explained yield performance in the contrasting seasons. The year of release of the cultivars correlated with grain yield but not with yield stability, supporting the contention that breeding for yield potential does not select for climate resilience and yield stability of crops. Further analysis of the outstanding cultivars may unravel target traits for breeding efforts aimed at increasing wheat yield potential and stability in the changing climate.

3.
J Biol Chem ; 293(34): 13033-13043, 2018 08 24.
Article in English | MEDLINE | ID: mdl-29925588

ABSTRACT

The catalytic performance of the major CO2-assimilating enzyme, ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco), restricts photosynthetic productivity. Natural diversity in the catalytic properties of Rubisco indicates possibilities for improvement. Oceanic phytoplankton contain some of the most efficient Rubisco enzymes, and diatoms in particular are responsible for a significant proportion of total marine primary production as well as being a major source of CO2 sequestration in polar cold waters. Until now, the biochemical properties and three-dimensional structures of Rubisco from diatoms were unknown. Here, diatoms from arctic waters were collected, cultivated, and analyzed for their CO2-fixing capability. We characterized the kinetic properties of five and determined the crystal structures of four Rubiscos selected for their high CO2-fixing efficiency. The DNA sequences of the rbcL and rbcS genes of the selected diatoms were similar, reflecting their close phylogenetic relationship. The Vmax and Km for the oxygenase and carboxylase activities at 25 °C and the specificity factors (Sc/o) at 15, 25, and 35 °C were determined. The Sc/o values were high, approaching those of mono- and dicot plants, thus exhibiting good selectivity for CO2 relative to O2 Structurally, diatom Rubiscos belong to form I C/D, containing small subunits characterized by a short ßA-ßB loop and a C-terminal extension that forms a ß-hairpin structure (ßE-ßF loop). Of note, the diatom Rubiscos featured a number of posttranslational modifications of the large subunit, including 4-hydroxyproline, ß-hydroxyleucine, hydroxylated and nitrosylated cysteine, mono- and dihydroxylated lysine, and trimethylated lysine. Our studies suggest adaptation toward achieving efficient CO2 fixation in arctic diatom Rubiscos.


Subject(s)
Carbon Dioxide/metabolism , Diatoms/enzymology , Protein Processing, Post-Translational , Ribulose-Bisphosphate Carboxylase/chemistry , Ribulose-Bisphosphate Carboxylase/metabolism , Crystallography, X-Ray , Hydroxylation , Kinetics , Nitrosation , Phylogeny , Protein Conformation , Protein Folding , Ribulose-Bisphosphate Carboxylase/genetics , Structure-Activity Relationship
4.
Essays Biochem ; 62(1): 109-118, 2018 04 13.
Article in English | MEDLINE | ID: mdl-29653967

ABSTRACT

Due to the growing world population, crop yields must increase to meet the rising demand. Crop plants also require adaptation to optimize performance in the changing environments caused by climate change. Improving photosynthetic carbon fixation is a promising, albeit technically challenging, strategy whose potential has only just begun to be considered in breeding programmes. Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco), a fundamental enzyme of carbon fixation, is extremely inefficient and many strategies to improve photosynthesis focus on overcoming the limitations of this enzyme, either by improving Rubisco activity and regulation or by improving the supply of substrates. Although progress is being made, the need to tailor solutions for each crop and their respective environments has been highlighted. Even so, continuing research will be required to achieve these objectives and to grow crops more sustainably in the future.


Subject(s)
Carbon Cycle , Crops, Agricultural/metabolism , Adaptation, Physiological , Crops, Agricultural/enzymology , Crops, Agricultural/physiology , Ribulose-Bisphosphate Carboxylase/metabolism
5.
J Exp Bot ; 68(13): 3473-3486, 2017 06 15.
Article in English | MEDLINE | ID: mdl-28859373

ABSTRACT

Improving photosynthesis is a major target for increasing crop yields and ensuring food security. Phenotyping of photosynthesis in the field is critical to understand the limits to crop performance in agricultural settings. Yet, detailed phenotyping of photosynthetic traits is relatively scarce in field-grown wheat, with previous studies focusing on narrow germplasm selections. Flag leaf photosynthetic traits, crop development, and yield traits were compared in 64 field-grown wheat cultivars in the UK. Pre-anthesis and post-anthesis photosynthetic traits correlated significantly and positively with grain yield and harvest index (HI). These traits included net CO2 assimilation measured at ambient CO2 concentrations and a range of photosynthetic photon flux densities, and traits associated with the light response of photosynthesis. In most cultivars, photosynthesis decreased post-anthesis compared with pre-anthesis, and this was associated with decreased Rubisco activity and abundance. Heritability of photosynthetic traits suggests that phenotypic variation can be used to inform breeding programmes. Specific cultivars were identified with traits relevant to breeding for increased crop yields in the UK: pre-anthesis photosynthesis, post-anthesis photosynthesis, light response of photosynthesis, and Rubisco amounts. The results indicate that flag leaf longevity and operating photosynthetic activity in the canopy can be further exploited to maximize grain filling in UK bread wheat.


Subject(s)
Carbon Dioxide/metabolism , Phenotype , Photosynthesis , Ribulose-Bisphosphate Carboxylase/metabolism , Triticum/growth & development , Triticum/genetics , Edible Grain/growth & development , England , Light , Longevity , Plant Leaves/growth & development , Triticum/metabolism
6.
Plant Physiol ; 172(2): 707-717, 2016 10.
Article in English | MEDLINE | ID: mdl-27342312

ABSTRACT

The threat to global food security of stagnating yields and population growth makes increasing crop productivity a critical goal over the coming decades. One key target for improving crop productivity and yields is increasing the efficiency of photosynthesis. Central to photosynthesis is Rubisco, which is a critical but often rate-limiting component. Here, we present full Rubisco catalytic properties measured at three temperatures for 75 plants species representing both crops and undomesticated plants from diverse climates. Some newly characterized Rubiscos were naturally "better" compared to crop enzymes and have the potential to improve crop photosynthetic efficiency. The temperature response of the various catalytic parameters was largely consistent across the diverse range of species, though absolute values showed significant variation in Rubisco catalysis, even between closely related species. An analysis of residue differences among the species characterized identified a number of candidate amino acid substitutions that will aid in advancing engineering of improved Rubisco in crop systems. This study provides new insights on the range of Rubisco catalysis and temperature response present in nature, and provides new information to include in models from leaf to canopy and ecosystem scale.


Subject(s)
Crops, Agricultural/genetics , Genetic Variation , Photosynthesis/genetics , Plant Proteins/genetics , Ribulose-Bisphosphate Carboxylase/genetics , Biocatalysis , Crops, Agricultural/classification , Crops, Agricultural/enzymology , Kinetics , Phylogeny , Plant Proteins/metabolism , Ribulose-Bisphosphate Carboxylase/metabolism , Sequence Analysis, DNA , Species Specificity , Temperature
7.
Nat Commun ; 7: 10382, 2016 Jan 21.
Article in English | MEDLINE | ID: mdl-26790750

ABSTRACT

The antiquity and global abundance of the enzyme, RuBisCO, attests to the crucial and longstanding role it has played in the biogeochemical cycles of Earth over billions of years. The counterproductive oxygenase activity of RuBisCO has persisted over billions of years of evolution, despite its competition with the carboxylase activity necessary for carbon fixation, yet hypotheses regarding the selective pressures governing RuBisCO evolution have been limited to speculation. Here we report the resurrection and biochemical characterization of ancestral RuBisCOs, dating back to over one billion years ago (Gyr ago). Our findings provide an ancient point of reference revealing divergent evolutionary paths taken by eukaryotic homologues towards improved specificity for CO2, versus the evolutionary emphasis on increased rates of carboxylation observed in bacterial homologues. Consistent with these distinctions, in vivo analysis reveals the propensity of ancestral RuBisCO to be encapsulated into modern-day carboxysomes, bacterial organelles central to the cyanobacterial CO2 concentrating mechanism.


Subject(s)
Bacteria/enzymology , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Ribulose-Bisphosphate Carboxylase/chemistry , Ribulose-Bisphosphate Carboxylase/genetics , Amino Acid Sequence , Bacteria/chemistry , Bacteria/classification , Bacteria/genetics , Bacterial Proteins/metabolism , Evolution, Molecular , Kinetics , Models, Molecular , Molecular Sequence Data , Phylogeny , Ribulose-Bisphosphate Carboxylase/metabolism , Sequence Alignment
8.
J Exp Bot ; 67(6): 1827-38, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26798025

ABSTRACT

Rubisco is a major target for improving crop photosynthesis and yield, yet natural diversity in catalytic properties of this enzyme is poorly understood. Rubisco from 25 genotypes of the Triticeae tribe, including wild relatives of bread wheat (Triticum aestivum), were surveyed to identify superior enzymes for improving photosynthesis in this crop. In vitro Rubisco carboxylation velocity (V c), Michaelis-Menten constants for CO2 (K c) and O2 (K o) and specificity factor (S c/o) were measured at 25 and 35 °C. V c and K c correlated positively, while V c and S c/o were inversely related. Rubisco large subunit genes (rbcL) were sequenced, and predicted corresponding amino acid differences analysed in relation to the corresponding catalytic properties. The effect of replacing native wheat Rubisco with counterparts from closely related species was analysed by modelling the response of photosynthesis to varying CO2 concentrations. The model predicted that two Rubisco enzymes would increase photosynthetic performance at 25 °C while only one of these also increased photosynthesis at 35 °C. Thus, under otherwise identical conditions, catalytic variation in the Rubiscos analysed is predicted to improve photosynthetic rates at physiological CO2 concentrations. Naturally occurring Rubiscos with superior properties amongst the Triticeae tribe can be exploited to improve wheat photosynthesis and crop productivity.


Subject(s)
Biocatalysis , Crops, Agricultural/enzymology , Crops, Agricultural/physiology , Photosynthesis , Ribulose-Bisphosphate Carboxylase/metabolism , Triticum/enzymology , Triticum/physiology , Amino Acids/metabolism , Genotype , Kinetics , Models, Biological , Triticum/genetics
9.
Plant J ; 85(1): 148-60, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26662726

ABSTRACT

Introducing a carbon-concentrating mechanism and a faster Rubisco enzyme from cyanobacteria into higher plant chloroplasts may improve photosynthetic performance by increasing the rate of CO2 fixation while decreasing losses caused by photorespiration. We previously demonstrated that tobacco plants grow photoautotrophically using Rubisco from Synechococcus elongatus, although the plants exhibited considerably slower growth than wild-type and required supplementary CO2 . Because of concerns that vascular plant assembly factors may not be adequate for assembly of a cyanobacterial Rubisco, prior transgenic plants included the cyanobacterial chaperone RbcX or the carboxysomal protein CcmM35. Here we show that neither RbcX nor CcmM35 is needed for assembly of active cyanobacterial Rubisco. Furthermore, by altering the gene regulatory sequences on the Rubisco transgenes, cyanobacterial Rubisco expression was enhanced and the transgenic plants grew at near wild-type growth rates, although still requiring elevated CO2 . We performed detailed kinetic characterization of the enzymes produced with and without the RbcX and CcmM35 cyanobacterial proteins. These transgenic plants exhibit photosynthetic characteristics that confirm the predicted benefits of introduction of non-native forms of Rubisco with higher carboxylation rate constants in vascular plants and the potential nitrogen-use efficiency that may be achieved provided that adequate CO2 is available near the enzyme.


Subject(s)
Bacterial Proteins/metabolism , Carbon Dioxide/metabolism , Molecular Chaperones/metabolism , Ribulose-Bisphosphate Carboxylase/metabolism , Synechococcus/enzymology , Bacterial Proteins/genetics , Carbon Cycle , Chloroplasts/metabolism , Kinetics , Molecular Chaperones/genetics , Nitrogen/metabolism , Photosynthesis , Plants, Genetically Modified , Ribulose-Bisphosphate Carboxylase/genetics , Synechococcus/genetics , Nicotiana/enzymology , Nicotiana/genetics , Nicotiana/growth & development , Transgenes
10.
Nature ; 513(7519): 547-50, 2014 Sep 25.
Article in English | MEDLINE | ID: mdl-25231869

ABSTRACT

In photosynthetic organisms, D-ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) is the major enzyme assimilating atmospheric CO2 into the biosphere. Owing to the wasteful oxygenase activity and slow turnover of Rubisco, the enzyme is among the most important targets for improving the photosynthetic efficiency of vascular plants. It has been anticipated that introducing the CO2-concentrating mechanism (CCM) from cyanobacteria into plants could enhance crop yield. However, the complex nature of Rubisco's assembly has made manipulation of the enzyme extremely challenging, and attempts to replace it in plants with the enzymes from cyanobacteria and red algae have not been successful. Here we report two transplastomic tobacco lines with functional Rubisco from the cyanobacterium Synechococcus elongatus PCC7942 (Se7942). We knocked out the native tobacco gene encoding the large subunit of Rubisco by inserting the large and small subunit genes of the Se7942 enzyme, in combination with either the corresponding Se7942 assembly chaperone, RbcX, or an internal carboxysomal protein, CcmM35, which incorporates three small subunit-like domains. Se7942 Rubisco and CcmM35 formed macromolecular complexes within the chloroplast stroma, mirroring an early step in the biogenesis of cyanobacterial ß-carboxysomes. Both transformed lines were photosynthetically competent, supporting autotrophic growth, and their respective forms of Rubisco had higher rates of CO2 fixation per unit of enzyme than the tobacco control. These transplastomic tobacco lines represent an important step towards improved photosynthesis in plants and will be valuable hosts for future addition of the remaining components of the cyanobacterial CCM, such as inorganic carbon transporters and the ß-carboxysome shell proteins.


Subject(s)
Crops, Agricultural/enzymology , Photosynthesis , Ribulose-Bisphosphate Carboxylase/metabolism , Biocatalysis/drug effects , Carbon Dioxide/metabolism , Carbon Dioxide/pharmacology , Chloroplasts/enzymology , Chloroplasts/genetics , Chloroplasts/metabolism , Crops, Agricultural/cytology , Crops, Agricultural/genetics , Crops, Agricultural/growth & development , Genes, Bacterial/genetics , Kinetics , Molecular Sequence Data , Phenotype , Photosynthesis/drug effects , Plants, Genetically Modified/cytology , Plants, Genetically Modified/enzymology , Plants, Genetically Modified/genetics , Plants, Genetically Modified/growth & development , Protein Subunits/chemistry , Protein Subunits/genetics , Protein Subunits/metabolism , Ribulose-Bisphosphate Carboxylase/chemistry , Ribulose-Bisphosphate Carboxylase/genetics , Synechococcus/enzymology , Synechococcus/genetics , Nicotiana/cytology , Nicotiana/enzymology , Nicotiana/genetics , Nicotiana/growth & development
11.
Plant J ; 79(1): 1-12, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24810513

ABSTRACT

The photosynthetic efficiency of C3 plants suffers from the reaction of ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) with O2 instead of CO2 , leading to the costly process of photorespiration. Increasing the concentration of CO2 around Rubisco is a strategy used by photosynthetic prokaryotes such as cyanobacteria for more efficient incorporation of inorganic carbon. Engineering the cyanobacterial CO2 -concentrating mechanism, the carboxysome, into chloroplasts is an approach to enhance photosynthesis or to compartmentalize other biochemical reactions to confer new capabilities on transgenic plants. We have chosen to explore the possibility of producing ß-carboxysomes from Synechococcus elongatus PCC7942, a model freshwater cyanobacterium. Using the agroinfiltration technique, we have transiently expressed multiple ß-carboxysomal proteins (CcmK2, CcmM, CcmL, CcmO and CcmN) in Nicotiana benthamiana with fusions that target these proteins into chloroplasts, and that provide fluorescent labels for visualizing the resultant structures. By confocal and electron microscopic analysis, we have observed that the shell proteins of the ß-carboxysome are able to assemble in plant chloroplasts into highly organized assemblies resembling empty microcompartments. We demonstrate that a foreign protein can be targeted with a 17-amino-acid CcmN peptide to the shell proteins inside chloroplasts. Our experiments establish the feasibility of introducing carboxysomes into chloroplasts for the potential compartmentalization of Rubisco or other proteins.


Subject(s)
Bacterial Proteins/metabolism , Chloroplast Proteins/metabolism , Nicotiana/ultrastructure , Organelles/ultrastructure , Synechococcus/genetics , Arabidopsis/genetics , Bacterial Proteins/genetics , Carbon Cycle , Carbon Dioxide/metabolism , Chloroplast Proteins/genetics , Chloroplasts/metabolism , Chloroplasts/ultrastructure , Feasibility Studies , Gene Expression , Genes, Reporter , Immunohistochemistry , Mesophyll Cells , Microscopy, Electron, Transmission , Microscopy, Fluorescence , Organelles/metabolism , Plant Leaves , Plants, Genetically Modified , Protein Sorting Signals/genetics , Protein Transport , Synechococcus/metabolism , Nicotiana/genetics , Nicotiana/metabolism
12.
New Phytol ; 203(3): 989-99, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24861241

ABSTRACT

Carbon assimilation by most ecosystems requires ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco). Its kinetic parameters are likely to have evolved in parallel with intracellular CO2 availability, with the result that faster forms of Rubisco occur in species with CO2 -concentrating mechanisms. The Rubisco catalytic properties were determined and evaluated in relation to growth and carbon assimilation capacity in Mediterranean Limonium species, inhabiting severe stress environments. Significant kinetic differences between closely related species depended on two amino acid substitutions at functionally important residues 309 and 328 within the Rubisco large subunit. The Rubisco of species facing the largest CO2 restrictions during drought had relatively high affinity for CO2 (low Michaelis-Menten constant for CO2 Kc) but low maximum rates of carboxylation (kcatc), while the opposite was found for species that maintained higher CO2 concentrations under similar conditions. Rubisco kinetic characteristics were correlated with photosynthetic rate in both well-watered and drought-stressed plants. Moreover, the drought-mediated decrease in plant biomass accumulation was consistently lower in species with higher Rubisco carboxylase catalytic efficiency (kcatc/Kc). The present study is the first demonstration of Rubisco adaptation during species diversification within closely related C3 plants, revealing a direct relationship between Rubisco molecular evolution and the biomass accumulation of closely related species subjected to unfavourable conditions.


Subject(s)
Carbon/metabolism , Environment , Evolution, Molecular , Photosynthesis , Plumbaginaceae/enzymology , Plumbaginaceae/growth & development , Ribulose-Bisphosphate Carboxylase/metabolism , Biocatalysis , Biomass , Carbon Dioxide/metabolism , Geography , Haplotypes , Kinetics , Molecular Sequence Data , Plant Leaves/physiology , Protein Subunits/metabolism , Spain , Species Specificity , Temperature
13.
Plant Cell Environ ; 37(9): 1989-2001, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24689692

ABSTRACT

The present study characterizes the kinetic properties of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from 28 terrestrial plant species, representing different phylogenetic lineages, environmental adaptations and photosynthetic mechanisms. Our findings confirm that past atmospheric CO(2)/O(2) ratio changes and present environmental pressures have influenced Rubisco kinetics. One evolutionary adaptation to a decreasing atmospheric CO(2)/O(2) ratio has been an increase in the affinity of Rubisco for CO(2) (Kc falling), and a consequent decrease in the velocity of carboxylation (kcat (c)), which in turn has been ameliorated by an increase in the proportion of leaf protein accounted by Rubisco. The trade-off between K(c) and k(cat)(c) was not universal among the species studied and deviations from this relationship occur in extant forms of Rubisco. In species adapted to particular environments, including carnivorous plants, crassulacean acid metabolism species and C(3) plants from aquatic and arid habitats, Rubisco has evolved towards increased efficiency, as demonstrated by a higher k(cat)(c)/K(c) ratio. This variability in kinetics was related to the amino acid sequence of the Rubisco large subunit. Phylogenetic analysis identified 13 residues under positive selection during evolution towards specific Rubisco kinetic parameters. This crucial information provides candidate amino acid replacements, which could be implemented to optimize crop photosynthesis under a range of environmental conditions.


Subject(s)
Biological Evolution , Environment , Plants/enzymology , Ribulose-Bisphosphate Carboxylase/metabolism , Amino Acids/metabolism , Bayes Theorem , Carbon Dioxide/metabolism , Kinetics , Phylogeny , Protein Subunits/metabolism , Selection, Genetic , Species Specificity , Temperature
14.
J Exp Bot ; 64(3): 717-30, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23162118

ABSTRACT

Rubisco (ribulose-1,5-bisphosphate (RuBP) carboxylase/oxygenase) enables net carbon fixation through the carboxylation of RuBP. However, some characteristics of Rubisco make it surprisingly inefficient and compromise photosynthetic productivity. For example, Rubisco catalyses a wasteful reaction with oxygen that leads to the release of previously fixed CO(2) and NH(3) and the consumption of energy during photorespiration. Furthermore, Rubisco is slow and large amounts are needed to support adequate photosynthetic rates. Consequently, Rubisco has been studied intensively as a prime target for manipulations to 'supercharge' photosynthesis and improve both productivity and resource use efficiency. The catalytic properties of Rubiscos from diverse sources vary considerably, suggesting that changes in turnover rate, affinity, or specificity for CO(2) can be introduced to improve Rubisco performance in specific crops and environments. While attempts to manipulate plant Rubisco by nuclear transformation have had limited success, modifying its catalysis by targeted changes to its catalytic large subunit via chloroplast transformation have been much more successful. However, this technique is still in need of development for most major food crops including maize, wheat, and rice. Other bioengineering approaches for improving Rubisco performance include improving the activity of its ancillary protein, Rubisco activase, in addition to modulating the synthesis and degradation of Rubisco's inhibitory sugar phosphate ligands. As the rate-limiting step in carbon assimilation, even modest improvements in the overall performance of Rubisco pose a viable pathway for obtaining significant gains in plant yield, particularly under stressful environmental conditions.


Subject(s)
Crops, Agricultural/enzymology , Plant Proteins/metabolism , Ribulose-Bisphosphate Carboxylase/metabolism , Crops, Agricultural/genetics , Crops, Agricultural/growth & development , Crops, Agricultural/metabolism , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Plant , Photosynthesis , Plant Proteins/genetics , Ribulose-Bisphosphate Carboxylase/genetics
15.
J Exp Bot ; 62(2): 453-67, 2011 Jan.
Article in English | MEDLINE | ID: mdl-21030385

ABSTRACT

Past increases in yield potential of wheat have largely resulted from improvements in harvest index rather than increased biomass. Further large increases in harvest index are unlikely, but an opportunity exists for increasing productive biomass and harvestable grain. Photosynthetic capacity and efficiency are bottlenecks to raising productivity and there is strong evidence that increasing photosynthesis will increase crop yields provided that other constraints do not become limiting. Even small increases in the rate of net photosynthesis can translate into large increases in biomass and hence yield, since carbon assimilation is integrated over the entire growing season and crop canopy. This review discusses the strategies to increase photosynthesis that are being proposed by the wheat yield consortium in order to increase wheat yields. These include: selection for photosynthetic capacity and efficiency, increasing ear photosynthesis, optimizing canopy photosynthesis, introducing chloroplast CO(2) pumps, increasing RuBP regeneration, improving the thermal stability of Rubisco activase, and replacing wheat Rubisco with that from other species with different kinetic properties.


Subject(s)
Breeding/methods , Photosynthesis , Triticum/growth & development , Triticum/metabolism , Carbon Dioxide/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Ribulose-Bisphosphate Carboxylase/genetics , Ribulose-Bisphosphate Carboxylase/metabolism , Triticum/enzymology , Triticum/genetics
16.
Plant Physiol ; 154(3): 1505-13, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20870777

ABSTRACT

How arsenic (As) is transported in phloem remains unknown. To help answer this question, we quantified the chemical species of As in phloem and xylem exudates of castor bean (Ricinus communis) exposed to arsenate [As(V)], arsenite [As(III)], monomethylarsonic acid [MMA(V)], or dimethylarsinic acid. In the As(V)- and As(III)-exposed plants, As(V) was the main species in xylem exudate (55%-83%) whereas As(III) predominated in phloem exudate (70%-94%). The ratio of As concentrations in phloem to xylem exudate varied from 0.7 to 3.9. Analyses of phloem exudate using high-resolution inductively coupled plasma-mass spectrometry and accurate mass electrospray mass spectrometry coupled to high-performance liquid chromatography identified high concentrations of reduced and oxidized glutathione and some oxidized phytochelatin, but no As(III)-thiol complexes. It is thought that As(III)-thiol complexes would not be stable in the alkaline conditions of phloem sap. Small concentrations of oxidized glutathione and oxidized phytochelatin were found in xylem exudate, where there was also no evidence of As(III)-thiol complexes. MMA(V) was partially reduced to MMA(III) in roots, but only MMA(V) was found in xylem and phloem exudate. Despite the smallest uptake among the four As species supplied to plants, dimethylarsinic acid was most efficiently transported in both xylem and phloem, and its phloem concentration was 3.2 times that in xylem. Our results show that free inorganic As, mainly As(III), was transported in the phloem of castor bean exposed to either As(V) or As(III), and that methylated As species were more mobile than inorganic As in the phloem.


Subject(s)
Arsenicals/chemistry , Phloem/chemistry , Ricinus communis/chemistry , Xylem/chemistry , Carbohydrates/analysis , Chromatography, High Pressure Liquid , Mass Spectrometry , Oxidation-Reduction , Sulfhydryl Compounds/chemistry
17.
J Exp Bot ; 61(9): 2355-66, 2010 May.
Article in English | MEDLINE | ID: mdl-20363871

ABSTRACT

In C4 plants, water deficit may decrease photosynthetic CO2 assimilation independently of changes in stomatal conductance, suggesting decreased turnover by ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco). The activity and biochemistry of Rubisco was studied in three different C4 grasses: Paspalum dilatatum, Cynodon dactylon, and Zoysia japonica. The objectives were to characterize the C4 Rubisco in these species and to identify factors associated with decreased photosynthetic rates caused by drought. Rubisco isolated from each of the three C4 grasses was characterized by smaller specificity factors (SC/O), larger Michaelis-Menten constants for CO2 (Kc) and O2 (Ko), and larger maximum carboxylation velocities (Vc) than Rubisco from wheat, which can be rationalized in terms of the CO2-rich environment of C4 Rubisco in the bundle sheath. During leaf dehydration the quantity and maximum activity of Rubisco remained unchanged but the initial and total activities declined slightly, possibly due to increased inhibition. Tight-binding inhibitors were present in the light but were more abundant in the dark, especially in Z. japonica, and increased in quantity with drought stress. The inhibitor from darkened leaves of Z. japonica was identified as 2-carboxyarabinitol-1-phosphate (CA1P). Consistent with the presence of CA1P, the total activity of Rubisco was decreased after 12 h darkness in Z. japonica. Ribulose-1,5-bisphosphate (RuBP) in the leaves decreased with drought stress, to quantities approximating those of Rubisco catalytic sites. The magnitude of the decrease in RuBP suggested that, at least in C. dactylon and Z. japonica, it could contribute to the drought-induced decrease in photosynthesis.


Subject(s)
Gene Expression Regulation, Enzymologic , Plant Proteins/metabolism , Poaceae/enzymology , Poaceae/physiology , Ribulose-Bisphosphate Carboxylase/metabolism , Droughts , Gene Expression Regulation, Enzymologic/radiation effects , Gene Expression Regulation, Plant/radiation effects , Kinetics , Light , Plant Proteins/chemistry , Plant Proteins/genetics , Poaceae/genetics , Poaceae/radiation effects , Ribulose-Bisphosphate Carboxylase/chemistry , Ribulose-Bisphosphate Carboxylase/genetics
18.
Plant Physiol ; 149(4): 1860-71, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19193861

ABSTRACT

Trehalose-6-phosphate (T6P) is a proposed signaling molecule in plants, yet how it signals was not clear. Here, we provide evidence that T6P functions as an inhibitor of SNF1-related protein kinase1 (SnRK1; AKIN10/AKIN11) of the SNF1-related group of protein kinases. T6P, but not other sugars and sugar phosphates, inhibited SnRK1 in Arabidopsis (Arabidopsis thaliana) seedling extracts strongly (50%) at low concentrations (1-20 microM). Inhibition was noncompetitive with respect to ATP. In immunoprecipitation studies using antibodies to AKIN10 and AKIN11, SnRK1 catalytic activity and T6P inhibition were physically separable, with T6P inhibition of SnRK1 dependent on an intermediary factor. In subsequent analysis, T6P inhibited SnRK1 in extracts of all tissues analyzed except those of mature leaves, which did not contain the intermediary factor. To assess the impact of T6P inhibition of SnRK1 in vivo, gene expression was determined in seedlings expressing Escherichia coli otsA encoding T6P synthase to elevate T6P or otsB encoding T6P phosphatase to decrease T6P. SnRK1 target genes showed opposite regulation, consistent with the regulation of SnRK1 by T6P in vivo. Analysis of microarray data showed up-regulation by T6P of genes involved in biosynthetic reactions, such as genes for amino acid, protein, and nucleotide synthesis, the tricarboxylic acid cycle, and mitochondrial electron transport, which are normally down-regulated by SnRK1. In contrast, genes involved in photosynthesis and degradation processes, which are normally up-regulated by SnRK1, were down-regulated by T6P. These experiments provide strong evidence that T6P inhibits SnRK1 to activate biosynthetic processes in growing tissues.


Subject(s)
Arabidopsis Proteins/antagonists & inhibitors , Arabidopsis/drug effects , Arabidopsis/enzymology , Metabolic Networks and Pathways/drug effects , Protein Serine-Threonine Kinases/antagonists & inhibitors , Sugar Phosphates/pharmacology , Trehalose/analogs & derivatives , Adenosine Triphosphate/pharmacology , Arabidopsis/genetics , Arabidopsis Proteins/metabolism , Catalytic Domain , Gene Expression Regulation, Plant/drug effects , Glucosyltransferases/metabolism , Oligonucleotide Array Sequence Analysis , Plant Extracts/metabolism , Plant Leaves/drug effects , Plant Leaves/enzymology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Seedlings/drug effects , Seedlings/enzymology , Seedlings/genetics , Software , Transcription Factors/metabolism , Trehalose/pharmacology
19.
J Exp Bot ; 59(7): 1569-80, 2008.
Article in English | MEDLINE | ID: mdl-18436543

ABSTRACT

In photosynthesis Rubisco catalyses the assimilation of CO(2) by the carboxylation of ribulose-1,5-bisphosphate. However, the catalytic properties of Rubisco are not optimal for current or projected environments and limit the efficiency of photosynthesis. Rubisco activity is highly regulated in response to short-term fluctuations in the environment, although such regulation may not be optimally poised for crop productivity. The regulation of Rubisco activity in higher plants is reviewed here, including the role of Rubisco activase, tight binding inhibitors, and the impact of abiotic stress upon them.


Subject(s)
Ribulose-Bisphosphate Carboxylase/antagonists & inhibitors , Ribulose-Bisphosphate Carboxylase/metabolism , Crops, Agricultural/enzymology , Enzyme Induction , Protein Binding , Ribulose-Bisphosphate Carboxylase/chemistry , Ribulose-Bisphosphate Carboxylase/genetics
20.
Ann Bot ; 89 Spec No: 833-9, 2002 Jun.
Article in English | MEDLINE | ID: mdl-12102509

ABSTRACT

Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activity is modulated in vivo either by reaction with CO2 and Mg2+ to carbamylate a lysine residue in the catalytic site, or by the binding of inhibitors within the catalytic site. Binding of inhibitors blocks either activity or the carbamylation of the lysine residue that is essential for activity. At night, in many species, 2-carboxyarabinitol-1-phosphate (CA1P) is formed which binds tightly to Rubisco, inhibiting catalytic activity. Recent work has shown that tight-binding inhibitors can also decrease Rubisco activity in the light and contribute to the regulation of Rubisco activity. Here we determine the influence that such inhibitors of Rubisco exert on catalytic activity during drought stress. In tobacco plants, 'total Rubisco activity', i.e. the activity following pre-incubation with CO2 and Mg2+, was positively correlated with leaf relative water content. However, 'total Rubisco activity' in extracts from leaves with low water potential increased markedly when tightly bound inhibitors were removed, thus increasing the number of catalytic sites available. This suggests that in tobacco the decrease of Rubisco activity under drought stress is not primarily the result of changes in activation by CO2 and Mg2+ but due rather to the presence of tight-binding inhibitors. The amounts of inhibitor present in leaves of droughted tobacco based on the decrease in Rubisco activity per mg soluble protein were usually much greater than the amounts of the known inhibitors (CA1P and 'daytime inhibitor') that can be recovered in acid extracts. Alternative explanations for the difference between maximal and total activities are discussed.


Subject(s)
Ribulose-Bisphosphate Carboxylase/metabolism , Water/physiology , Carbon Dioxide/metabolism , Carbon Dioxide/pharmacology , Chlorophyll/physiology , Disasters , Magnesium/pharmacology , Osmotic Pressure , Pentosephosphates/metabolism , Plant Leaves/drug effects , Plant Leaves/metabolism , Ribulose-Bisphosphate Carboxylase/antagonists & inhibitors , Ribulose-Bisphosphate Carboxylase/drug effects , Stress, Mechanical , Nicotiana/drug effects , Nicotiana/metabolism , Triticum/drug effects , Triticum/metabolism , Water/pharmacology
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