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1.
Int J Mol Sci ; 23(3)2022 Feb 06.
Article in English | MEDLINE | ID: mdl-35163756

ABSTRACT

The increasing antibiotic resistance is a clinical problem worldwide. Numerous Gram-negative bacteria have already become resistant to the most widely used class of antibacterial drugs, ß-lactams. One of the main mechanisms is inactivation of ß-lactam antibiotics by bacterial ß-lactamases. Appearance and spread of these enzymes represent a continuous challenge for the clinical treatment of infections and for the design of new antibiotics and inhibitors. Drug repurposing is a prospective approach for finding new targets for drugs already approved for use. We describe here the inhibitory potency of known detoxifying antidote 2,3-dimercaptopropane-1-sulfonate (unithiol) against metallo-ß-lactamases. Unithiol acts as a competitive inhibitor of meropenem hydrolysis by recombinant metallo-ß-lactamase NDM-1 with the KI of 16.7 µM. It is an order of magnitude lower than the KI for l-captopril, the inhibitor of angiotensin-converting enzyme approved as a drug for the treatment of hypertension. Phenotypic methods demonstrate that the unithiol inhibits natural metallo-ß-lactamases NDM-1 and VIM-2 produced by carbapenem-resistant K. pneumoniae and P. aeruginosa bacterial strains. The 3D full atom structures of unithiol complexes with NDM-1 and VIM-2 are obtained using QM/MM modeling. The thiol group is located between zinc cations of the active site occupying the same place as the catalytic hydroxide anion in the enzyme-substrate complex. The sulfate group forms both a coordination bond with a zinc cation and hydrogen bonds with the positively charged residue, lysine or arginine, responsible for proper orientation of antibiotics upon binding to the active site prior to hydrolysis. Thus, we demonstrate both experimentally and theoretically that the unithiol is a prospective competitive inhibitor of metallo-ß-lactamases and it can be utilized in complex therapy together with the known ß-lactam antibiotics.


Subject(s)
Klebsiella pneumoniae/enzymology , Pseudomonas aeruginosa/enzymology , Unithiol/pharmacology , beta-Lactamase Inhibitors/pharmacology , beta-Lactamases/metabolism , Carbapenems/pharmacology , Drug Repositioning , Drug Resistance, Bacterial/drug effects , Gene Expression Regulation, Bacterial/drug effects , Gene Expression Regulation, Enzymologic/drug effects , Klebsiella pneumoniae/drug effects , Models, Molecular , Protein Conformation , Pseudomonas aeruginosa/drug effects , Quantitative Structure-Activity Relationship , beta-Lactamases/chemistry
2.
Bioorg Med Chem Lett ; 27(7): 1588-1592, 2017 04 01.
Article in English | MEDLINE | ID: mdl-28237762

ABSTRACT

The novel classes of acylated phenoxyanilide and thiourea compounds were investigated for their ability to inhibit TEM type ß-lactamase enzyme. Two compounds 4g and 5c reveal the inhibition potency in micromolar range and show their action by non-covalent binding in the vicinity of the TEM-171 active site. The structure activity relationship around carbon chain length and different substituents in ortho- and para-positions of acylated phenoxyanilide as well as molecular modelling study has been performed.


Subject(s)
Escherichia coli Proteins/antagonists & inhibitors , Thiourea/analogs & derivatives , beta-Lactamase Inhibitors/chemistry , beta-Lactamases/chemistry , Anilides/chemistry , Catalytic Domain , Escherichia coli Proteins/chemistry , Hydrogen Bonding , Kinetics , Molecular Docking Simulation , Phenyl Ethers/chemistry , Structure-Activity Relationship , Thiourea/chemistry
3.
Appl Microbiol Biotechnol ; 93(1): 179-89, 2012 Jan.
Article in English | MEDLINE | ID: mdl-21870047

ABSTRACT

A test system is described and expanded upon for mass field immunochromatography assay on porous membrane carriers for rapid diagnostics of potato virus X (PVX) in potato leaf tissue and sprout extracts using colloidal gold nanoparticles as a marker. Sensitivity of the assay developed for PVX identification is found to be comparable to the sensitivity of solid-phase sandwich-ELISA. Complete assay time does not exceed 15 min, and the lower limit of the PVX detection in non-clarified leaf extract is 2 ng/ml. A single measurement requires 0.1-0.2 ml (3-5 drops) of tested solution only (extracted from 10-20 mg of potato leaf tissue or sprouts). The simplicity and reliability of the method makes it especially efficient in direct rapid monitoring of many infected potato specimens in the field, as verified by field trials of 360 clones of 28 domestic and foreign cultivars of potato. A diagnostic kit for routine analyses of potato viral infections both in the laboratory and in the field is described and expanded upon.


Subject(s)
Plant Diseases/virology , Potexvirus/isolation & purification , Solanum tuberosum/virology , Virology/methods , Chromatography, Affinity/methods , Potexvirus/immunology , Sensitivity and Specificity , Time Factors
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