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1.
Chemphyschem ; 15(5): 974-80, 2014 Apr 04.
Article in English | MEDLINE | ID: mdl-24692298

ABSTRACT

We report a new family of hierarchical hybrid catalysts comprised of horseradish peroxidase (HRP)-magnetic nanoparticles for advanced oxidation processes and demonstrate their utility in the removal of phenol from water. The immobilized HRP catalyzes the oxidation of phenols in the presence of H2 O2 , producing free radicals. The phenoxy radicals react with each other in a non-enzymatic process to form polymers, which can be removed by precipitation with salts or condensation. The hybrid peroxidase catalysts exhibit three times higher activity than free HRP and are able to remove three times more phenol from water compared to free HRP under similar conditions. In addition, the hybrid catalysts reduce substrate inhibition and limit inactivation from reaction products, which are common problems with free or conventionally immobilized enzymes. Reusability is improved when the HRP-magnetic nanoparticle hybrids are supported on micron-scale magnetic particles, and can be retained with a specially designed magnetically driven reactor. The performance of the hybrid catalysts makes them attractive for several industrial and environmental applications and their development might pave the way for practical applications by eliminating most of the limitations that have prevented the use of free or conventionally immobilized enzymes.


Subject(s)
Horseradish Peroxidase/metabolism , Phenol/metabolism , Wastewater/chemistry , Biocatalysis , Environmental Restoration and Remediation , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Horseradish Peroxidase/chemistry , Hydrogen Peroxide/chemistry , Magnetite Nanoparticles/chemistry , Oxidation-Reduction , Phenol/chemistry , Polymers/chemistry
2.
Plant Cell Environ ; 36(2): 454-66, 2013 Feb.
Article in English | MEDLINE | ID: mdl-22860896

ABSTRACT

High-throughput phenotyping of root systems requires a combination of specialized techniques and adaptable plant growth, root imaging and software tools. A custom phenotyping platform was designed to capture images of whole root systems, and novel software tools were developed to process and analyse these images. The platform and its components are adaptable to a wide range root phenotyping studies using diverse growth systems (hydroponics, paper pouches, gel and soil) involving several plant species, including, but not limited to, rice, maize, sorghum, tomato and Arabidopsis. The RootReader2D software tool is free and publicly available and was designed with both user-guided and automated features that increase flexibility and enhance efficiency when measuring root growth traits from specific roots or entire root systems during large-scale phenotyping studies. To demonstrate the unique capabilities and high-throughput capacity of this phenotyping platform for studying root systems, genome-wide association studies on rice (Oryza sativa) and maize (Zea mays) root growth were performed and root traits related to aluminium (Al) tolerance were analysed on the parents of the maize nested association mapping (NAM) population.


Subject(s)
High-Throughput Screening Assays/methods , Oryza/growth & development , Oryza/genetics , Plant Roots/growth & development , Plant Roots/genetics , Zea mays/growth & development , Zea mays/genetics , Adaptation, Physiological/drug effects , Adaptation, Physiological/genetics , Aluminum/toxicity , Genome, Plant/genetics , Genome-Wide Association Study , Phenotype , Polymorphism, Single Nucleotide/genetics , Software
3.
Plant Physiol ; 156(2): 455-65, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21454799

ABSTRACT

A novel imaging and software platform was developed for the high-throughput phenotyping of three-dimensional root traits during seedling development. To demonstrate the platform's capacity, plants of two rice (Oryza sativa) genotypes, Azucena and IR64, were grown in a transparent gellan gum system and imaged daily for 10 d. Rotational image sequences consisting of 40 two-dimensional images were captured using an optically corrected digital imaging system. Three-dimensional root reconstructions were generated and analyzed using a custom-designed software, RootReader3D. Using the automated and interactive capabilities of RootReader3D, five rice root types were classified and 27 phenotypic root traits were measured to characterize these two genotypes. Where possible, measurements from the three-dimensional platform were validated and were highly correlated with conventional two-dimensional measurements. When comparing gellan gum-grown plants with those grown under hydroponic and sand culture, significant differences were detected in morphological root traits (P < 0.05). This highly flexible platform provides the capacity to measure root traits with a high degree of spatial and temporal resolution and will facilitate novel investigations into the development of entire root systems or selected components of root systems. In combination with the extensive genetic resources that are now available, this platform will be a powerful resource to further explore the molecular and genetic determinants of root system architecture.


Subject(s)
Imaging, Three-Dimensional/methods , Oryza/anatomy & histology , Phenotype , Plant Roots/anatomy & histology , Software , Environment , Gravitropism/drug effects , Hydroponics , Models, Biological , Oryza/drug effects , Oryza/growth & development , Plant Roots/drug effects , Plant Roots/physiology , Polysaccharides, Bacterial/pharmacology , Quantitative Trait, Heritable , Reproducibility of Results , Silicon Dioxide , Time Factors
4.
Chemoecology ; 18(2): 109-119, 2008.
Article in English | MEDLINE | ID: mdl-18698369

ABSTRACT

Beetles of the family Lycidae have long been known to be chemically protected. We present evidence that North American species of the lycid genera Calopteron and Lycus are rejected by thrushes, wolf spiders, and orb-weaving spiders, and that they contain a systemic compound that could account, at least in part, for this unacceptability. This compound, a novel acetylenic acid that we named lycidic acid, proved actively deterrent in feeding tests with wolf spiders and coccinellid beetles.Species of Lycus commonly figure as models of mimetic associations. Among their mimics are species of the cerambycid beetle genus Elytroleptus, remarkable because they prey upon the model lycids. We postulated that by doing so Elytroleptus might incorporate the lycidic acid from their prey for their own defense. However, judging from analytical data, the beetles practice no such sequestration, explaining why they remain relatively palatable (in tests with wolf spiders) even after having fed on lycids. Chemical analyses also showed the lycids to contain pyrazines, such as were already known from other Lycidae, potent odorants that could serve in an aposematic capacity to forestall predatory attacks.

5.
J Exp Biol ; 211(Pt 3): 409-22, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18203997

ABSTRACT

We present electrical, physiological and molecular evidence for substantial electrical coupling of epithelial cells in Malpighian tubules via gap junctions. Current was injected into one principal cell of the isolated Malpighian tubule and membrane voltage deflections were measured in that cell and in two neighboring principal cells. By short-circuiting the transepithelial voltage with the diuretic peptide leucokinin-VIII we largely eliminated electrical coupling of principal cells through the tubule lumen, thereby allowing coupling through gap junctions to be analyzed. The analysis of an equivalent electrical circuit of the tubule yielded an average gap-junction resistance (R(gj)) of 431 kOmega between two cells. This resistance would stem from 6190 open gap-junctional channels, assuming the high single gap-junction conductance of 375 pS found in vertebrate tissues. The addition of the calcium ionophore A23187 (2 micromol l(-1)) to the peritubular Ringer bath containing 1.7 mmol l(-1) Ca(2+) did not affect the gap-junction resistance, but metabolic inhibition of the tubule with dinitrophenol (0.5 mmol l(-1)) increased the gap-junction resistance 66-fold, suggesting the regulation of gap junctions by ATP. Lucifer Yellow injected into a principal cell did not appear in neighboring principal cells. Thus, gap junctions allow the passage of current but not Lucifer Yellow. Using RT-PCR we found evidence for the expression of innexins 1, 2, 3 and 7 (named after their homologues in Drosophila) in Malpighian tubules. The physiological demonstration of gap junctions and the molecular evidence for innexin in Malpighian tubules of Aedes aegypti call for the double cable model of the tubule, which will improve the measurement and the interpretation of electrophysiological data collected from Malpighian tubules.


Subject(s)
Aedes/metabolism , Gap Junctions/metabolism , Malpighian Tubules/metabolism , Aedes/drug effects , Animals , Calcimycin/pharmacology , Dinitrophenols/pharmacology , Electric Impedance , Electrophysiology , Epithelial Cells/cytology , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Gap Junctions/drug effects , Gene Expression Regulation/drug effects , Insect Proteins/genetics , Insect Proteins/metabolism , Isoquinolines , Malpighian Tubules/cytology , Malpighian Tubules/drug effects , Phylogeny , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Homology, Amino Acid
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