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1.
Sci Total Environ ; 942: 173752, 2024 Sep 10.
Article in English | MEDLINE | ID: mdl-38851334

ABSTRACT

The sustainability of wastewater treatment plants poses significant challenges for developing countries, necessitating substantial investment for operation and maintenance. Biofilm reactors seeded with specific species of microorganisms were investigated under controlled environmental conditions. However, the performance evaluation of such reactors under natural conditions remains largely underexplored. This study investigated wastewater treatment capabilities of bench-scale fixed bed biofilm reactors, employing various species (Wastewater Microbes, Pseudomonas, Algae, and a co-culture of Algae and Pseudomonas). The reactors (Treatments and Control) were filled with 28 mm nominal-size local aggregates as packing media, operated under different contact times, and subjected to varying concentrations of heavy metals (Zn, Cd). To assess the reactor performances, the Bland-Altman Plot and Chemical Oxygen Demand (COD) removal kinetics were evaluated. The results revealed that the reactor initiated with a co-culture exhibited the optimal COD removal efficiency, reaching 84 ± 1 %. The reactor initially seeded with wastewater microbes exhibited the highest heavy metal elimination, achieving 94 ± 1 % and 88 ± 1 % removal for Zn and Cd respectively. The wastewater-seeded reactor demonstrated the zero-order COD removal kinetic coefficient (k) of 46.41 mg/L/h at an average influent COD concentration of 558 mg/L at 10 h contact time. While Pseudomonas-seeded reactor demonstrated k = 0.73 mg/L/h at 20 h contact time with 69 mg/L influent COD and heavy metal concentrations Zn = 26 mg/L and Cd = 3.57 mg/L. The findings of this study suggest that variations in environmental conditions, contact time, and heavy metal concentration have minimal impact on the pollutant removal efficacy of the reactors, and provide robust evidence for their viability as a sustainable alternative in municipal wastewater treatment. The study also identifies the possibility of treating specific wastewater characteristics by altering the dominant species in the reactors, paving the way for further research on the efficacy of other microbial genomes in fixed bed biofilm reactors.


Subject(s)
Biofilms , Bioreactors , Metals, Heavy , Waste Disposal, Fluid , Wastewater , Water Pollutants, Chemical , Wastewater/chemistry , Waste Disposal, Fluid/methods , Water Pollutants, Chemical/analysis , Metals, Heavy/analysis , Nepal , Biological Oxygen Demand Analysis
2.
Chemosphere ; 349: 140846, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38043616

ABSTRACT

Iron-based materials (IBMs) have shown promise as adsorbents due to their unique physicochemical properties. This review provides an overview of the different types of IBMs, their synthesis methods, and their properties. Results found in the adsorption of emerging contaminants to a wide range of IBMs are discussed. The IBMs used were evaluated in terms of their maximum uptake capacity, with special consideration given to environmental conditions such as contact time, solution pH, initial pollutant concentration, etc. The adsorption mechanisms of pollutants are discussed taking into account the results of kinetic, isotherm, thermodynamic studies, surface complexation modelling (SCM), and available spectroscopic data. A current overview of molecular modeling and simulation studies related to density functional theory (DFT), surface response methodology (RSM), and artificial neural network (ANN) is presented. In addition, the reusability and suitability of IBMs in real wastewater treatment is shown. The review concludes with the strengths and weaknesses of current research and suggests ideas for future research that will improve our ability to remove contaminants from real wastewater streams.


Subject(s)
Environmental Pollutants , Water Pollutants, Chemical , Iron , Adsorption , Thermodynamics , Kinetics
3.
Sci Total Environ ; 862: 160800, 2023 Mar 01.
Article in English | MEDLINE | ID: mdl-36493816

ABSTRACT

A bushfire is a spontaneous vegetation fire that can fundamentally affect lives, property, the environment, and even the global climate. Ash from fire carries hazardous pollutants like metal oxides/hydroxides, minerals, black carbons, and by-products of partial combustion, such as hydrocarbons and colloidal charcoal. Bushfire gases and residues can heavily pollute surface and groundwater resources. This paper focuses on the impact of bushfire residue on water quality and explores methods to remediate impacted water supplies. Soils burned in controlled furnace conditions between 150 °C, and 600 °C were characterised, suspended in water, and changes in water quality was measured following leaching from the burned residues. Results indicate that once the soil is burned at temperatures above 300 °C, there is little evidence of leached organic matter. At temperatures below 300 °C, the water discolouration was evident after 24 h leaching, and much higher quantities of leached organic matter were measured. Higher burning temperatures resulted in more alkaline residues. Leachate and charred sample characterisation data shows that the charcoal is highly porous and mainly consists of- amorphous material. The ash is a heterogeneous concoction of smaller particles and comprises significant mineral content. The results also indicate that the primary pollutant among the brushfire residuals is ash which increases pH, alkalinity, turbidity, and UV254. Coagulation experiments reveal that dual coagulation systems with metal salts- organic polyelectrolyte reduced the turbidity by 84 %, and dissolved organic carbon (DOC) reduced by 68 % of water containing ash residues. However, some other treatments are needed to reduce the alkalinity.


Subject(s)
Charcoal , Fires , Charcoal/chemistry , Metals , Water Quality , Soil/chemistry
4.
Environ Pollut ; 314: 120272, 2022 Dec 01.
Article in English | MEDLINE | ID: mdl-36167167

ABSTRACT

Natural processes and human activities play a crucial role in changing the nitrogen cycle and increasing nitrous oxide (N2O) emissions, which are accelerating at an unprecedented rate. N2O has serious global warming potential (GWP), about 310 times higher than that of carbon dioxide. The food production, transportation, and energy required to sustain a world population of seven billion have required dramatic increases in the consumption of synthetic nitrogen (N) fertilizers and fossil fuels, leading to increased N2O in air and water. These changes have radically disturbed the nitrogen cycle and reactive nitrogen species, such as nitrous oxide (N2O), and have impacted the climatic system. Yet, systematic and comprehensive studies on various underlying processes and parameters in the altered nitrogen cycle, and their implications for the climatic system are still lacking. This paper reviews how the nitrogen cycle has been disturbed and altered by anthropogenic activities, with a central focus on potential pathways of N2O generation. The authors also estimate the N2O-N emission mainly due to anthropogenic activities will be around 8.316 Tg N2O-N yr-1 in 2050. In order to minimize and tackle the N2O emissions and its consequences on the global ecosystem and climate change, holistic mitigation strategies and diverse adaptations, policy reforms, and public awareness are suggested as vital considerations. This study concludes that rapidly increasing anthropogenic perturbations, the identification of new microbial communities, and their role in mediating biogeochemical processes now shape the modern nitrogen cycle.


Subject(s)
Fertilizers , Nitrous Oxide , Humans , Nitrous Oxide/analysis , Climate Change , Ecosystem , Carbon Dioxide , Nitrogen Cycle , Nitrogen/analysis , Reactive Nitrogen Species , Fossil Fuels , Water , Soil , Nitrification
5.
Bioorg Med Chem ; 69: 116832, 2022 09 01.
Article in English | MEDLINE | ID: mdl-35752141

ABSTRACT

A novel series of TGX-221 analogues was prepared that include isosteric replacement of the 4H-pyrido[1,2-a]pyrimidin-4-one with a 4H-benzo[e][1,3]oxazin-4-one scaffold. The compounds that included an CH(CH3)NH type linker showed comparable activity to TGX-221 analogues with the isosterism supported by the comparative SAR analysis. The analogues containing an CH(CH3)O linker were less active but still showed useful SAR including a favoured o-methyl substitution.


Subject(s)
Morpholines , Pyrimidinones , Pyrimidinones/pharmacology , Structure-Activity Relationship
6.
PLoS One ; 13(11): e0203969, 2018.
Article in English | MEDLINE | ID: mdl-30427850

ABSTRACT

Hygienic behaviour is a social immune response in honey bees shown to help provide resistance to honey bee pests and diseases. A survey of hygienic behaviour and brood diseases was conducted on 649 colonies in eastern Australia to initiate a selective breeding program targeting disease resistance and provide a level of resistance to Varroa (Varroa destructor Anderson and Trueman and V. jacobsoni Oudemans) mites should they become established in Australia. The test population showed a remarkably high baseline level of hygienic behaviour with 17% of colonies meeting or exceeding breeding selection thresholds. Colonies belonging to a breeding program were 5.8 times more likely to be highly hygienic and colonies headed by queens raised from hygienic queen mothers were 2.2 times more likely. Nectar availability (nectar yielding flowering plants within honey bee forage range) influenced hygienic behaviour expression but was not a significant predictor of level of hygienic behaviour. Surprisingly, hygienic behaviour was not a significant predictor of the presence of infection of the honey bee brood disease chalkbrood (Ascosphaera apis) and was not influential in predicting severity of chalkbrood infection in surveyed honey bee colonies. This study, along with reports from commercial beekeepers that chalkbrood infection is on the rise, warrants a deeper exploration of the host-pathogen relationship between Apis mellifera and Ascosphaera apis in Australia.


Subject(s)
Animal Diseases/parasitology , Bees/parasitology , Breeding , Grooming , Varroidae , Animals , Australia , Freezing
7.
Pharmaceuticals (Basel) ; 11(1)2018 Feb 26.
Article in English | MEDLINE | ID: mdl-29495355

ABSTRACT

The delivery of phages to epithelial surfaces for therapeutic outcomes is a realistic proposal, and indeed one which is being currently tested in clinical trials. This paper reviews some of the known research on formulation of phages into semi-solid dosage forms such as creams, ointments and pastes, as well as solid dosage forms such as troches (or lozenges and pastilles) and suppositories/pessaries, for delivery to the epithelia. The efficacy and stability of these phage formulations is discussed, with a focus on selection of optimal semi-solid bases for phage delivery. Issues such as the need for standardisation of techniques for formulation as well as for assessment of efficacy are highlighted. These are important when trying to compare results from a range of experiments and across different delivery bases.

8.
J Colloid Interface Sci ; 474: 159-70, 2016 Jul 15.
Article in English | MEDLINE | ID: mdl-27124810

ABSTRACT

HYPOTHESIS: Oxides, hydrous oxides and hydroxides of aluminium and iron are important in determining the availability of trace and heavy metals in soil systems. The presence of complexing anions is also known to affect the binding of these metals in soils. Since organophosphates, such as inositol hexaphosphate (IP6), are present in most soil systems they are expected to affect the nature of the interaction between metal ions and metal (hyr)oxides. EXPERIMENTS: Both adsorption edge and isotherm experiments were conducted on Cd(II)-gibbsite and Cd(II)-IP6-gibbsite systems. In addition, solid-state (31)P MAS NMR measurements were performed on the ternary system. All results were used to develop Extended Constant Capacitance surface complexation models of both the Cd(II)-gibbsite and IP6-Cd(II)-gibbsite sorption systems. FINDINGS: The presence of IP6 significantly increased sorption of Cd(II) to gibbsite below pH 8 especially at higher concentrations of Cd(II) and IP6. The (31)P MAS NMR spectra, together with surface complexation modeling, indicated the presence of two outer-sphere ternary complexes with the first, [(SOH2)3(3+)(LHCd)(9-)](6-), important at relatively low concentrations, while the second, [SLH3(8-)Cd(2+)](6-), dominated sorption at higher sorbate concentrations. Thus the presence of organophosphates in soil systems increases sorption and may therefore decrease the availability of trace and heavy metals to plants.

9.
Eur J Med Chem ; 110: 326-39, 2016 Mar 03.
Article in English | MEDLINE | ID: mdl-26854431

ABSTRACT

The synthesis of 6-aryl, 8- aryl, and 8-aryl-6-chloro-2-morpholino-1,3-benzoxazines with potent activity against PI3K and DNA-PK is described. Synthesis of thirty one analogues was facilitated by an improved synthesis of 3-bromo-2-hydroxybenzoic acid 13 by de-sulphonation of 3-bromo-2-hydroxy-5-sulfobenzoic acid 12 en route to 2-methylthio-substituted-benzoxazine intermediates 17-19. From this series, compound 20k (LTURM34) (dibenzo[b,d]thiophen-4-yl) (IC50 = 0.034 µM) was identified as a specific DNA-PK inhibitor, 170 fold more selective for DNA-PK activity compared to PI3K activity. Other compounds of the series show markedly altered selectivity for various PI3K isoforms including compound 20i (8-(naphthalen-1-yl) a potent and quite selective PI3Kδ inhibitor (IC50 = 0.64 µM). Finally, nine compounds were evaluated and showed antiproliferative activity against an NCI panel of cancer cell lines. Compound 20i (8-(naphthalen-1-yl) showed strong anti-proliferative activity against A498 renal cancer cells that warrants further investigation.


Subject(s)
Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacology , Benzoxazines/chemistry , Benzoxazines/pharmacology , DNA-Activated Protein Kinase/antagonists & inhibitors , Phosphoinositide-3 Kinase Inhibitors , Antineoplastic Agents/chemical synthesis , Benzoxazines/chemical synthesis , Cell Line, Tumor , Cell Proliferation/drug effects , DNA-Activated Protein Kinase/metabolism , Humans , Naphthalenes/chemical synthesis , Naphthalenes/chemistry , Naphthalenes/pharmacology , Neoplasms/drug therapy , Neoplasms/enzymology , Neoplasms/metabolism , Phosphatidylinositol 3-Kinases/metabolism , Structure-Activity Relationship , Thiophenes/chemical synthesis , Thiophenes/chemistry , Thiophenes/pharmacology
10.
Crit Rev Food Sci Nutr ; 56(8): 1231-41, 2016 Jun 10.
Article in English | MEDLINE | ID: mdl-25747270

ABSTRACT

Walnuts are among the most widely consumed commercially grown tree nuts in the world. Many health benefits have been claimed for the consumption of these, including reduced risk of cardiovascular disease, coronary heart disease, type II diabetes treatment, and prevention and treatment of certain cancers, and the lessening of symptoms attributed to age-related and other neurological disorders. The health-promoting benefits of walnut consumption are ascribed to its fatty acid profile, which is rich in polyunsaturated fatty acids with a particularly high ω3:ω6 ratio-the highest among all the tree nuts. The content of polyphenols and other phytochemicals in walnuts, with their claimed cytotoxic properties, also make them an attractive candidate for research for the prevention of free radical-induced nucleic acid damage. Research of walnut consumption in humans and animals employing a range of data sets and statistical methods suggest that walnuts may be considered a safe potential nutraceutical or possibly pharmaceutical substance. Nevertheless, few reviews of scientific research on the proposed benefits of these nuts exist, in spite of the numerous claims attributed to them in the lay media. This brief review article attempts to disseminate much of the information surrounding walnut consumption, and human health benefits, to other scientists and the interested general reader.


Subject(s)
Health Promotion , Juglans/chemistry , Nuts/chemistry , Animals , Antioxidants/analysis , Cardiovascular Diseases/prevention & control , Diabetes Mellitus, Type 2 , Diet , Dietary Supplements , Fatty Acids, Omega-3/analysis , Fatty Acids, Omega-6/analysis , Fatty Acids, Unsaturated/analysis , Humans , Neoplasms/prevention & control , Polyphenols/analysis
11.
J Colloid Interface Sci ; 440: 282-91, 2015 Feb 15.
Article in English | MEDLINE | ID: mdl-25460716

ABSTRACT

The sorption of Inositol hexaphosphate (IP6) onto gibbsite was investigated using a combination of adsorption experiments, (31)P solid-state MAS NMR spectroscopy, and surface complexation modeling. Adsorption experiments conducted at four temperatures showed that IP6 sorption decreased with increasing pH. At pH 6, IP6 sorption increased with increasing temperature, while at pH 10 sorption decreased as the temperature was raised. (31)P MAS NMR measurements at pH 3, 6, 9 and 11 produced spectra with broad resonance lines that could be de-convoluted with up to five resonances (+5, 0, -6, -13 and -21ppm). The chemical shifts suggest the sorption process involves a combination of both outer- and inner-sphere complexation and surface precipitation. Relative intensities of the observed resonances indicate that outer-sphere complexation is important in the sorption process at higher pH, while inner-sphere complexation and surface precipitation are dominant at lower pH. Using the adsorption and (31)P MAS NMR data, IP6 sorption to gibbsite was modeled with an extended constant capacitance model (ECCM). The adsorption reactions that best described the sorption of IP6 to gibbsite included two inner-sphere surface complexes and one outer-sphere complex: ≡AlOH + IP6¹²â» + 5H⁺ ↔ ≡Al(IP6H4)7⁻ + H2O, ≡3AlOH + IP6¹²â» + 6H⁺ ↔ ≡Al3(IP6H3)6⁻ + 3H2O, ≡2AlOH + IP6¹²â» + 4H⁺ ↔ (≡AlOH2)2²âº(IP6H2)¹°â». The inner-sphere complex involving three surface sites may be considered to be equivalent to a surface precipitate. Thermodynamic parameters were obtained from equilibrium constants derived from surface complexation modeling. Enthalpies for the formation of inner-sphere surface complexes were endothermic, while the enthalpy for the outer-sphere complex was exothermic. The entropies for the proposed sorption reactions were large and positive suggesting that changes in solvation of species play a major role in driving the sorption process.


Subject(s)
Models, Chemical , Phytic Acid/chemistry , Surface Properties , Magnetic Resonance Spectroscopy , Thermodynamics
12.
Eur J Med Chem ; 57: 85-101, 2012 Nov.
Article in English | MEDLINE | ID: mdl-23059543

ABSTRACT

A number of new 2-(pyridin-3-ylamino)-4H-(substituted) benz[e]-1,3-oxazin-4-ones were synthesized 10a-g. These were then reacted with the hydro-halogen salt of 2, 3 and 4-(halo-methyl) pyridine in the presence of Cs(2)CO(3) to give eighteen new 2-(N-substituted (pyridin-3-ylmethyl) amino)-substituted-1,3-benzoxazines (compounds 11a-i, 13a-c, and 15a-f). X-ray crystallography was used to confirm that the 2-N-substituted structures 11 and 13 were formed rather than the 3-N-substitution analogues 12 and 14. Eleven of the new compounds were tested for their effect on collagen induced platelet aggregation and it was found that the most active inhibitory compound was 8-methyl-2-(pyridin-3-yl(pyridin-3-ylmethyl)amino)-7-(pyridin-3-ylmethoxy)-4H-benz[e]-1,3-oxazin-4-one 15e with an IC(50) of 10 ± 2 µM. DNA-dependent protein kinase (DNA-PK) inhibition data for 12 previously prepared 2-morpholino substituted-1,3-benzoxazines (compounds 19-31) were measured and showed high to moderate activity where the most active compound was compound 27 with an IC(50) of 0.28 µM. Furthermore DNA-PK inhibition data for six newly prepared 2-(N-substituted (pyridin-3-ylmethyl) amino)-substituted-1,3-benzoxazines (compounds 11b, 13a-b, 15a-b and 15e) and 8-methyl-7-(pyridin-3-ylmethoxy)-3-(pyridin-3-ylmethyl)-2H-benz[e]-1,3-oxazin-2,4(3H)-dione 17d were measured and moderate to low inhibitory activity was observed, with the most active of the compounds in this series being 8-methyl-2-(pyridin-3-yl(pyridin-3-ylmethyl)amino)-7-(pyridin-3-ylmethoxy)-4H-benz[e]-1,3-oxazin-4-one 15e with an IC(50) of 2.5 µM. PI3K inhibition studies revealed that compound 27 is highly potent (IC(50) for PI3Kα = 0.13 µM, PI3Kß = 0.14 µM, PI3Kγ = 0.72 µM, PI3Kδ = 2.02 µM). Compound 22 with 7-[2-(4-methylpiperazin-1-yl)ethoxy] group shows greater inhibition of DNA-PK over PI3K. Docking of some 2-morpholino-substituted-1,3-benzoxazine compounds 19-31 within the binding pocket and structure-activity relationships (SAR) analyses were performed with results agreeing well with observed activities.


Subject(s)
Benzoxazines/chemical synthesis , Blood Platelets/drug effects , DNA-Activated Protein Kinase/chemistry , Phosphatidylinositol 3-Kinases/chemistry , Platelet Aggregation Inhibitors/chemical synthesis , Platelet Aggregation/drug effects , Protein Subunits/chemistry , Benzoxazines/pharmacology , Collagen/pharmacology , Crystallography, X-Ray , DNA-Activated Protein Kinase/antagonists & inhibitors , Humans , Inhibitory Concentration 50 , Molecular Docking Simulation , Phosphoinositide-3 Kinase Inhibitors , Platelet Aggregation Inhibitors/pharmacology , Protein Subunits/antagonists & inhibitors , Structure-Activity Relationship
13.
Environ Sci Technol ; 46(20): 11128-34, 2012 Oct 16.
Article in English | MEDLINE | ID: mdl-23013221

ABSTRACT

Uranium (U(VI)) sorption in systems containing titanium dioxide (TiO(2)) and various Fe(III)-oxide phases was investigated in the acidic pH range (pH 2.5-6). Studies were conducted with physical mixtures of TiO(2) and ferrihydrite, TiO(2) with coprecipitated ferrihydrite, and with systems where Fe(III) was mostly present as crystalline Fe(III) oxides. The presence of ferrihydrite resulted in decreased U(VI) sorption relative to the pure TiO(2) systems, particularly below pH 4, an unexpected result given that the presence of another sorbent would be expected to increase U(VI) uptake. In mixtures of TiO(2) and crystalline Fe(III) oxide phases, U(VI) sorption was higher than for the analogous mixtures of TiO(2) with ferrihydrite, and was similar to U(VI) sorption on TiO(2) alone. X-ray absorption spectroscopy of the TiO(2) system with freshly precipitated Fe(III) oxides indicated the presence of an Fe(III) surface phase that inhibits U(VI) sorption-a reaction whereby Fe(III) precipitates as lepidocrocite and/or ferrihydrite effectively blocking surface sorption sites on the underlying TiO(2). Competition between dissolved Fe(III) and U(VI) for sorption sites may also contribute to the observed decrease in U(VI) sorption. The present study demonstrates the complexity of sorption in mixed systems, where the oxide phases do not necessarily behave in an additive manner, and has implications for U(VI) mobility in natural and impacted environments where Fe(III) (oxyhydr)oxides are usually assumed to increase the retention of U(VI).


Subject(s)
Environmental Pollutants/chemistry , Ferric Compounds/chemistry , Iron/chemistry , Titanium/chemistry , Uranium/chemistry , Adsorption , Kinetics , Models, Chemical
14.
J Colloid Interface Sci ; 367(1): 436-42, 2012 Feb 01.
Article in English | MEDLINE | ID: mdl-22035760

ABSTRACT

Adsorption of inositol hexaphosphate (IP(6)) on goethite has been studied as a function of pH and concentration, and by use of Attenuated Total Reflectance-Fourier Transform Infrared Spectroscopy (ATR-FTIR). While adsorption was highest at low pH, a significant amount remained adsorbed above pH 10 where, in the absence of IP(6), the surface is expected to have a net negative charge. The adsorption isotherm at pH 5.5 indicated strong binding to the surface with each adsorbed species occupying about 2.5 nm(2). ATR-FTIR spectra of IP(6) solutions in the pH range from 2 to 12 were fitted with a single set of IR bands which were assigned primarily by analogy with phosphate spectra. From its variation in intensity with pH the band at 1040 cm(-1) was assigned to the effect of hydrogen bonding on the PO vibration. No additional bands were required to fit the spectra of IP(6) adsorbed to goethite, indicating that adsorption occurs by outer-sphere complexation in this system. At all pH values studied the band associated with hydrogen bonding was more intense for the adsorbed species than in solution at the corresponding pH indicating that hydrogen bonding plays an important role in binding IP(6) to goethite.


Subject(s)
Iron Compounds/chemistry , Minerals/chemistry , Phytic Acid/isolation & purification , Adsorption , Hydrogen-Ion Concentration , Spectroscopy, Fourier Transform Infrared
15.
Bioorg Med Chem ; 19(13): 3983-94, 2011 Jul 01.
Article in English | MEDLINE | ID: mdl-21664823

ABSTRACT

A number of new angular 2-morpholino-(substituted)-naphth-1,3-oxazines (compound 10b), linear 2-morpholino-(substituted)-naphth-1,3-oxazines (compounds 13b-c), linear 6, 7 and 9-O-substituted-2-morpholino-(substituted)-naphth-1,3-oxazines (compounds 17-22, 24, and 25) and angular compounds 14-16 and 23 were synthesised. The O-substituent was pyridin-2yl-methyl (15, 18, and 21) pyridin-3yl-methyl (16, 19, and 22) and 4-methylpipreazin-1-yl-ethoxy (23-25). Twelve compounds were tested for their inhibitory effect on collagen induced platelet aggregation and it was found that the most active compounds were compounds 19 and 22 with IC(50)=55±4 and 85±4 µM, respectively. Furthermore, the compounds were also assayed for their ability to inhibit DNA-dependent protein kinase (DNA-PK) activity. The most active compounds were 18 IC(50)=0.091 µM, 24 IC(50)=0.191 µM, and 22 IC(50)=0.331 µM. Homology modelling was used to build a 3D model of DNA-PK based on the X-ray structure of phosphatidylinositol 3-kinases (PI3Ks). Docking of synthesised compounds within the binding pocket and structure-activity relationships (SAR) analyses of the poses were performed and results agreed well with observed activity.


Subject(s)
DNA-Activated Protein Kinase/antagonists & inhibitors , Morpholines/chemistry , Morpholines/chemical synthesis , Oxazines/chemistry , Platelet Aggregation Inhibitors/chemical synthesis , Protein Kinase Inhibitors/chemical synthesis , Amino Acid Sequence , Binding Sites , Collagen/pharmacology , Computer Simulation , DNA-Activated Protein Kinase/metabolism , Humans , Models, Molecular , Molecular Sequence Data , Morpholines/pharmacology , Oxazines/chemical synthesis , Oxazines/pharmacology , Phosphatidylinositol 3-Kinases/chemistry , Platelet Aggregation/drug effects , Platelet Aggregation Inhibitors/chemistry , Platelet Aggregation Inhibitors/pharmacology , Protein Kinase Inhibitors/chemistry , Protein Kinase Inhibitors/pharmacology , Protein Structure, Tertiary , Sequence Alignment , Structure-Activity Relationship
16.
Colloids Surf B Biointerfaces ; 72(2): 289-94, 2009 Sep 01.
Article in English | MEDLINE | ID: mdl-19477105

ABSTRACT

Attempts to measure the hydrophobicity of the cell surfaces of Gordonia amarae and Rhodococcus erythropolis, filamentous bacteria found in wastewater treatment plants, by several methods--microbial adhesion to hydrocarbons (MATH) or bacterial adhesion to hydrocarbons (BATH), contact angle, and micro-sphere adhesion to cells (MAC)--were unsuccessful. The results were erratic and inconsistent. This was in part because of the filamentous growth habit of G. amarae, but it was also a consequence of the fact that the 'hydrophobicity' of bacterial cells is not a clearly defined quantity. A technique is introduced in which bacteria are suspended in solutions of synthetic surfactants (non-ionic, cationic and anionic), and the suspensions aerated under defined conditions. The partitioning of bacterial cells between the foam and liquid phases was reproducible. The method was tested in model systems in which the bacteria were replaced by silica particles with defined surface modifications. Although this technique is not a direct measure of 'hydrophobicity', the partitioning of cells depends in part upon their surface hydrophobicity. In addition, qualitative information is gained about ionic interactions between the bacteria and the bubble surface. The results are pertinent to the problem of foaming in wastewater treatment plants.


Subject(s)
Bacteria/metabolism , Waste Disposal, Fluid , Bacterial Adhesion , Gordonia Bacterium/metabolism , Hydrocarbons , Hydrophobic and Hydrophilic Interactions , Rhodococcus/metabolism , Surface Properties
17.
Colloids Surf B Biointerfaces ; 63(1): 21-6, 2008 May 01.
Article in English | MEDLINE | ID: mdl-18068338

ABSTRACT

Bacteria have been implicated in the formation of viscous brown foams that can appear suddenly on wastewater treatment plants. Three strains of the filamentous bacterium Gordonia amarae, isolated from wastewater treatment plants, were investigated to determine their effect on foam formation and stabilisation. During the exponential phase of the bacterial growth a biosurfactant was formed, causing a significant drop in the surface tension of the filtered medium and the formation of persistent foam. Foaming tests in the presence and absence of bacteria showed that bacteria increased foam persistence, most probably by reducing the drainage from the lamellae between bubbles. Experiments showed that > or =55% of the three bacterial strains partitioned into the foam produced by the biosurfactant, indicating that their surfaces were hydrophobic. The extent of partitioning was independent of the growth stage, suggesting that the cell surface hydrophobicity did not change with age, or with cell viability. This work shows that, although the G. amarae cells themselves do not cause foaming, they do produce biosurfactant, which aids foam formation, and they stabilise the foam by reducing the rate of drainage from the foam lamellae.


Subject(s)
Bacteria/chemistry , Gram-Positive Bacteria/chemistry , Bacteria/growth & development , Biomass , Culture Media , Oxygen Consumption , Surface Tension , Waste Disposal, Fluid , Water Microbiology
18.
Mar Pollut Bull ; 54(9): 1321-32, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17669437

ABSTRACT

Farming of wild tuna in coastal areas is a relatively new aquaculture industry and little is known about the magnitude of nutrient discharges to the environment. In this work we present a preliminary model of nitrogen loads from southern bluefin tuna (Thunnus maccoyii) aquaculture in lower Spencer Gulf, South Australia. The model was developed based on feed inputs, estimates of fish metabolism and environmental data. Two pens were monitored over a full grow-out season to determine nitrogen sedimentation fluxes, remineralization at the sediment-water interface and accumulation in the sediments. The model suggests that the high metabolic rates of tuna lead to low retention of nitrogen in fish tissues (7-12% of feed inputs) and high environmental losses (260-502kg Ntonne(-1) growth). Considering Australian annual production of 4380tonnes over initial stocked biomass, total loads can reach 1137tonnes N per year, 86-92% lost as dissolved wastes. The nature of wastes suggests low localized impacts at current stocking densities and holding periods.


Subject(s)
Aquaculture , Fishes , Models, Biological , Nitrogen/analysis , Animals , Feces/chemistry , Fishes/metabolism , Geologic Sediments/analysis , Nitrogen/metabolism , South Australia
19.
J Agric Food Chem ; 55(18): 7527-33, 2007 Sep 05.
Article in English | MEDLINE | ID: mdl-17676866

ABSTRACT

Sorption of chlorpyrifos (CPF) from 2.85 microM (1 mg/L) aqueous solutions in 0.01 M NaCl to montmorillonite, kaolinite, and gibbsite was investigated at 25 degrees C. Uptake of CPF by kaolinite and gibbsite was generally <10%, with pH having at most a small effect. Sorption to montmorillonite was significantly greater, with approximately 50% of the initial CPF being removed from solution below pH 5. Above pH 5 the sorption decreased to about 30%. About 70% of CPF was sorbed to kaolinite and gibbsite after 30 min, whereas on montmorillonite only 50% sorbed in an initial rapid uptake (approximately 30 min) followed by slower sorption, with a maximum achieved by 24 h. Although CPF desorbed completely from kaolinite in methanol, only about two-thirds was desorbed from montmorillonite. CPF has only a weak affinity for the surfaces of kaolinite and gibbsite. In the case of montmorillonite, sorption is significantly stronger and may involve a combination of sorption to external surfaces and diffusion into microporous regions. At pH >6 increased negative surface charge results in a lower affinity of CPF for the external surface. In the presence of 50 mg/L humic acid (HA) the amount of CPF sorbed on gibbsite and kaolinite was 3-4 times greater than that in the binary systems. The HA forms an organic coating on the mineral surface, providing a more hydrophobic environment, leading to enhanced CPF uptake. The HA coating on montmorillonite may reduce access of CPF to microporous regions, with CPF tending to accumulate within the HA coating.


Subject(s)
Chlorpyrifos/chemistry , Humic Substances , Minerals/chemistry , Adsorption , Chemical Phenomena , Chemistry, Physical , Hydrogen-Ion Concentration , Kinetics , Solutions , Water
20.
Langmuir ; 23(6): 3205-13, 2007 Mar 13.
Article in English | MEDLINE | ID: mdl-17266338

ABSTRACT

Sorption of phosphate onto gibbsite (gamma-Al(OH)3) and kaolinite has been studied by both macroscopic and 31P solid-state NMR measurements. Together these measurements indicate that phosphate is sorbed by a combination of surface complexation and surface precipitation with the relative amounts of these phases depending on pH and phosphate concentration. At low pH and high phosphate concentrations sorption is dominated by the presence of both amorphous and crystalline precipitate phases. The similarity between the single-pulse and CP/MAS NMR spectra suggests that the precipitate phases form a thin layer on the surface of the particles in close contact with protons from surface hydroxyl groups or coordinated water molecules. While the crystalline phase is only evident on samples below pH 7, amorphous AlPO4 was found at all pH and phosphate concentrations studied. As pH was increased the fraction of phosphate sorbed as an inner-sphere complex increased, becoming the dominant surface species by pH 8. Comparison of sorption and NMR results suggests that the inner-sphere complexes form by monodentate coordination to singly coordinated Al-OH sites on the edges of the gibbsite and kaolinite crystals. Outer-sphere phosphate complexes, which are readily desorbed, are also present at high pH.


Subject(s)
Aluminum Hydroxide/chemistry , Kaolin/chemistry , Magnetic Resonance Spectroscopy/methods , Phosphates/chemistry , Adsorption , Biophysics/methods , Chemistry, Physical/methods , Crystallization , Hydrogen-Ion Concentration , Protons , Soil , Solubility , Time Factors , Water/chemistry
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