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1.
J Mol Struct ; 1243: 130705, 2021 Nov 05.
Article in English | MEDLINE | ID: mdl-34031619

ABSTRACT

We have used bioinformatics to identify drugs for the treatment of COVID-19, using drugs already being tested for the treatment as benchmarks like Remdesivir and Chloroquine. Our findings provide further support for drugs that are already being explored as therapeutic agents for the treatment of COVID-19 and identify promising new targets that merit further investigation. In addition, the epoxidation of Parthenolide 1 using peracids, has been scrutinized within the MEDT at the B3LYP/6-311(d,p) computational level. DFT results showed a high chemoselectivity on the double bond C3[bond, double bond]C4, in full agreement with the experimental outcomes. ELF analysis demonstrated that epoxidation reaction took place through a one-step mechanism, in which the formation of the two new C-O single bonds is somewhat asynchronous.

2.
Phys Chem Chem Phys ; 11(35): 7659-68, 2009 Sep 21.
Article in English | MEDLINE | ID: mdl-19950505

ABSTRACT

Ferulic acid is widely distributed in the leaves and seeds of cereals as well as in coffee, apples, artichokes, peanuts, oranges and pineapples. Like numerous other natural polyphenols it exhibits antioxidant properties. It is known to act as a free radical scavenger by H atom transfer from the phenolic OH group. In the present joint experimental and theoretical studies we studied a new mechanism to explain such activities. Ferulic acid can indeed act by radical addition on the alpha,beta-double bond. On the basis of the identification of metabolites formed in an oxidative radiolytic solution and after DFT calculations, we studied the thermodynamic and kinetic aspects of this reaction. Addition and HAT reactions were treated as competitive reactions. The possibility of dimer formation was also investigated from a theoretical point of view; the high barriers we obtained contribute to explaining why we did not observe those compounds as major radiolytic compounds. The DPPH free radical scavenging capacity of ferulic acid and the oxidative products was measured and is discussed on the basis of DFT calculations (BDEs and spin densities).


Subject(s)
Antioxidants/analysis , Coumaric Acids/analysis , Free Radical Scavengers/analysis , Models, Molecular , Oxidation-Reduction
3.
J Phys Chem A ; 113(50): 13881-91, 2009 Dec 17.
Article in English | MEDLINE | ID: mdl-19899743

ABSTRACT

Natural polyphenols are known to exhibit a lot of different biological properties, including antioxidant activity. For some polyphenols these activities are attributed to the presence of a guaiacol moiety. In the present paper we focus on the role of this moiety. For this purpose nine different compounds were enzymatically synthesized from guaiacol. To elucidate the structure-activity relationship of these polyphenols, DFT-(PCM)B3P86/6-311+G(2d,3pd)//(PCM)B3P86/6-31+G(d,p) calculations supported the experimental DPPH free radical scavenging activities. The antioxidant activities were correlated to (i) O-H BDEs (bond dissociation enthalpies), (ii) BDE(D) (BDE of a second H atom abstraction from the phenoxyradicals), (iii) spin density, (iv) HOMO (highest occupied molecular orbital) distribution, (v) IPs (ionization potentials), (vi) DeltaG and DeltaG(#) free energies of HAT (H atom transfer), and (vii) HAT rate constants. BDE(D) appeared to be the most important descriptor to understand the free radical scavenging ability of these compounds.


Subject(s)
Free Radical Scavengers/chemistry , Guaiacol/chemistry , Polymers/chemistry , Quantum Theory , Biphenyl Compounds/chemistry , Electron Spin Resonance Spectroscopy , Enzymes/metabolism , Free Radical Scavengers/chemical synthesis , Free Radical Scavengers/metabolism , Guaiacol/chemical synthesis , Guaiacol/metabolism , Hydroxyl Radical/chemistry , Kinetics , Models, Molecular , Molecular Conformation , Peroxides/chemistry , Picrates/chemistry , Thermodynamics
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