Calibration and Inter-Unit Consistency Assessment of an Electrochemical Sensor System Using Machine Learning.

This paper addresses the challenges of calibrating low-cost electrochemical sensor systems for air quality monitoring. The proliferation of pollutants in the atmosphere necessitates efficient monitoring systems, and low-cost sensors offer a promising solution. However, issues such as drift, cross-sensitivity, and inter-unit consistency have raised concerns about their accuracy and reliability. The study explores the following three calibration methods for converting sensor signals to concentration measurements: utilizing manufacturer-provided equations, incorporating machine learning (ML) algorithms, and directly applying ML to voltage signals. Experiments were performed in three urban sites in Greece. High-end instrumentation provided the reference concentrations for training and evaluation of the model. The results reveal that utilizing voltage signals instead of the manufacturer's calibration equations diminishes variability among identical sensors. Moreover, the latter approach enhances calibration efficiency for CO, NO, NO2, and O3 sensors while incorporating voltage signals from all sensors in the ML algorithm, taking advantage of cross-sensitivity to improve calibration performance. The Random Forest ML algorithm is a promising solution for calibrating similar devices for use in urban areas.

Integrating Machine Learning in Clinical Practice for Characterizing the Malignancy of Solitary Pulmonary Nodules in PET/CT Screening.

The study investigates the efficiency of integrating Machine Learning (ML) in clinical practice for diagnosing solitary pulmonary nodules' (SPN) malignancy. Patient data had been recorded in the Department of Nuclear Medicine, University Hospital of Patras, in Greece. A dataset comprising 456 SPN characteristics extracted from CT scans, the SUVmax score from the PET examination, and the ultimate outcome (benign/malignant), determined by patient follow-up or biopsy, was used to build the ML classifier. Two medical experts provided their malignancy likelihood scores, taking into account the patient's clinical condition and without prior knowledge of the true label of the SPN. Incorporating human assessments into ML model training improved diagnostic efficiency by approximately 3%, highlighting the synergistic role of human judgment alongside ML. Under the latter setup, the ML model had an accuracy score of 95.39% (CI 95%: 95.29-95.49%). While ML exhibited swings in probability scores, human readers excelled in discerning ambiguous cases. ML outperformed the best human reader in challenging instances, particularly in SPNs with ambiguous probability grades, showcasing its utility in diagnostic grey zones. The best human reader reached an accuracy of 80% in the grey zone, whilst ML exhibited 89%. The findings underline the collaborative potential of ML and human expertise in enhancing SPN characterization accuracy and confidence, especially in cases where diagnostic certainty is elusive. This study contributes to understanding how integrating ML and human judgement can optimize SPN diagnostic outcomes, ultimately advancing clinical decision-making in PET/CT screenings.

Fuzzy Cognitive Map Applications in Medicine over the Last Two Decades: A Review Study.

Fuzzy Cognitive Maps (FCMs) have become an invaluable tool for healthcare providers because they can capture intricate associations among variables and generate precise predictions. FCMs have demonstrated their utility in diverse medical applications, from disease diagnosis to treatment planning and prognosis prediction. Their ability to model complex relationships between symptoms, biomarkers, risk factors, and treatments has enabled healthcare providers to make informed decisions, leading to better patient outcomes. This review article provides a thorough synopsis of using FCMs within the medical domain. A systematic examination of pertinent literature spanning the last two decades forms the basis of this overview, specifically delineating the diverse applications of FCMs in medical realms, including decision-making, diagnosis, prognosis, treatment optimisation, risk assessment, and pharmacovigilance. The limitations inherent in FCMs are also scrutinised, and avenues for potential future research and application are explored.

Classification models for assessing coronary artery disease instances using clinical and biometric data: an explainable man-in-the-loop approach.

The main goal driving this work is to develop computer-aided classification models relying on clinical data to identify coronary artery disease (CAD) instances with high accuracy while incorporating the expert's opinion as input, making it a "man-in-the-loop" approach. CAD is traditionally diagnosed in a definite manner by Invasive Coronary Angiography (ICA). A dataset was created using biometric and clinical data from 571 patients (21 total features, 43% ICA-confirmed CAD instances) along with the expert's diagnostic yield. Five machine learning classification algorithms were applied to the dataset. For the selection of the best feature set for each algorithm, three different parameter selection algorithms were used. Each ML model's performance was evaluated using common metrics, and the best resulting feature set for each is presented. A stratified ten-fold validation was used for the performance evaluation. This procedure was run both using the assessments of experts/doctors as input and without them. The significance of this paper lies in its innovative approach of incorporating the expert's opinion as input in the classification process, making it a "man-in-the-loop" approach. This approach not only increases the accuracy of the models but also provides an added layer of explainability and transparency, allowing for greater trust and confidence in the results. Maximum achievable accuracy, sensitivity, and specificity are 83.02%, 90.32%, and 85.49% when using the expert's diagnosis as input, compared to 78.29%, 76.61%, and 86.07% without the expert's diagnosis. The results of this study demonstrate the potential for this approach to improve the diagnosis of CAD and highlight the importance of considering the role of human expertise in the development of computer-aided classification models.

Deep learning-enhanced nuclear medicine SPECT imaging applied to cardiac studies.

Deep learning (DL) has a growing popularity and is a well-established method of artificial intelligence for data processing, especially for images and videos. Its applications in nuclear medicine are broad and include, among others, disease classification, image reconstruction, and image de-noising. Positron emission tomography (PET) and single-photon emission computerized tomography (SPECT) are major image acquisition technologies in nuclear medicine. Though several studies have been conducted to apply DL in many nuclear medicine domains, such as cancer detection and classification, few studies have employed such methods for cardiovascular disease applications. The present paper reviews recent DL approaches focused on cardiac SPECT imaging. Extensive research identified fifty-five related studies, which are discussed. The review distinguishes between major application domains, including cardiovascular disease diagnosis, SPECT attenuation correction, image denoising, full-count image estimation, and image reconstruction. In addition, major findings and dominant techniques employed for the mentioned task are revealed. Current limitations of DL approaches and future research directions are discussed.

AI-based classification algorithms in SPECT myocardial perfusion imaging for cardiovascular diagnosis: a review.

In the last few years, deep learning has made a breakthrough and established its position in machine learning classification problems in medical image analysis. Deep learning has recently displayed remarkable applicability in a range of different medical applications, as well as in nuclear cardiology. This paper implements a literature review protocol and reports the latest advances in artificial intelligence (AI)-based classification in SPECT myocardial perfusion imaging in heart disease diagnosis. The representative and most recent works are reported to demonstrate the use of AI and deep learning technologies in medical image analysis in nuclear cardiology for cardiovascular diagnosis. This review also analyses the primary outcomes of the presented research studies and suggests future directions focusing on the explainability of the deployed deep-learning systems in clinical practice.

Deep Learning Assessment for Mining Important Medical Image Features of Various Modalities.

Deep learning (DL) is a well-established pipeline for feature extraction in medical and nonmedical imaging tasks, such as object detection, segmentation, and classification. However, DL faces the issue of explainability, which prohibits reliable utilisation in everyday clinical practice. This study evaluates DL methods for their efficiency in revealing and suggesting potential image biomarkers. Eleven biomedical image datasets of various modalities are utilised, including SPECT, CT, photographs, microscopy, and X-ray. Seven state-of-the-art CNNs are employed and tuned to perform image classification in tasks. The main conclusion of the research is that DL reveals potential biomarkers in several cases, especially when the models are trained from scratch in domains where low-level features such as shapes and edges are not enough to make decisions. Furthermore, in some cases, device acquisition variations slightly affect the performance of DL models.

A Deep Learning Methodology for the Detection of Abnormal Parathyroid Glands via Scintigraphy with 99mTc-Sestamibi.

BACKGROUND: Parathyroid proliferative disorder encompasses a wide spectrum of diseases, including parathyroid adenoma (PTA), parathyroid hyperplasia, and parathyroid carcinoma. Imaging modalities that deliver their results preoperatively help in the localisation of parathyroid glands (PGs) and assist in surgery. Artificial intelligence and, more specifically, image detection methods, can assist medical experts and reduce the workload in their everyday routine. METHODS: The present study employs an innovative CNN topology called ParaNet, to analyse early MIBI, late MIBI, and TcO4 thyroid scan images simultaneously to perform first-level discrimination between patients with abnormal PGs (aPG) and patients with normal PGs (nPG). The study includes 632 parathyroid scans. RESULTS: ParaNet exhibits a top performance, reaching an accuracy of 96.56% in distinguishing between aPG and nPG scans. Its sensitivity and specificity are 96.38% and 97.02%, respectively. PPV and NPV values are 98.76% and 91.57%, respectively. CONCLUSIONS: The proposed network is the first to introduce the automatic discrimination of PG and nPG scans acquired by scintigraphy with 99mTc-sestamibi (MIBI). This methodology could be applied to the everyday routine of medics for real-time evaluation or educational purposes.

Deep learning exploration for SPECT MPI polar map images classification in coronary artery disease.

OBJECTIVE: The exploration and the implementation of a deep learning method using a state-of-the-art convolutional neural network for the classification of polar maps represent myocardial perfusion for the detection of coronary artery disease. SUBJECTS AND METHODS: In the proposed research, the dataset includes stress and rest polar maps in attenuation-corrected (AC) and non-corrected (NAC) format, counting specifically 144 normal and 170 pathological cases. Due to the small number of the dataset, the following methods were implemented: First, transfer learning was conducted using VGG16, which is applied broadly in medical industry. Furthermore, data augmentation was utilized, wherein the images are rotated and flipped for expanding the dataset. Secondly, we evaluated a custom convolutional neural network called RGB CNN, which utilizes fewer parameters and is more lightweight. In addition, we utilized the k-fold validation for evaluating variability and overall performance of the examined model. RESULTS: Our RGB CNN model achieved an agreement rating of 92.07% with a loss of 0.2519. The transfer learning technique (VGG16) attained 95.83% accuracy. CONCLUSIONS: The proposed model could be an effective tool for medical classification problems, in the case of polar map data acquired from myocardial perfusion images.

Applications of Generative Adversarial Networks (GANs) in Positron Emission Tomography (PET) imaging: A review.

PURPOSE: This paper reviews recent applications of Generative Adversarial Networks (GANs) in Positron Emission Tomography (PET) imaging. Recent advances in Deep Learning (DL) and GANs catalysed the research of their applications in medical imaging modalities. As a result, several unique GAN topologies have emerged and been assessed in an experimental environment over the last two years. METHODS: The present work extensively describes GAN architectures and their applications in PET imaging. The identification of relevant publications was performed via approved publication indexing websites and repositories. Web of Science, Scopus, and Google Scholar were the major sources of information. RESULTS: The research identified a hundred articles that address PET imaging applications such as attenuation correction, de-noising, scatter correction, removal of artefacts, image fusion, high-dose image estimation, super-resolution, segmentation, and cross-modality synthesis. These applications are presented and accompanied by the corresponding research works. CONCLUSION: GANs are rapidly employed in PET imaging tasks. However, specific limitations must be eliminated to reach their full potential and gain the medical community's trust in everyday clinical practice.

Automatic classification of solitary pulmonary nodules in PET/CT imaging employing transfer learning techniques.

Early and automatic diagnosis of Solitary Pulmonary Nodules (SPN) in Computed Tomography (CT) chest scans can provide early treatment for patients with lung cancer, as well as doctor liberation from time-consuming procedures. The purpose of this study is the automatic and reliable characterization of SPNs in CT scans extracted from Positron Emission Tomography and Computer Tomography (PET/CT) system. To achieve the aforementioned task, Deep Learning with Convolutional Neural Networks (CNN) is applied. The strategy of training specific CNN architectures from scratch and the strategy of transfer learning, by utilizing state-of-the-art pre-trained CNNs, are compared and evaluated. To enhance the training sets, data augmentation is performed. The publicly available database of CT scans, named as Lung Image Database Consortium and Image Database Resource Initiative (LIDC-IDRI), is also utilized to further expand the training set and is added to the PET/CT dataset. The results highlight the effectiveness of transfer learning and data augmentation for the classification task of small datasets. The best accuracy obtained on the PET/CT dataset reached 94%, utilizing a modification proposal of a state-of-the-art CNN, called VGG16, and enhancing the training set with LIDC-IDRI dataset. Besides, the proposed modification outperforms in terms of sensitivity several similar researches, which exploit the benefits of transfer learning. Overview of the experiment setup. The two datasets containing nodule representations are combined to evaluate the effectiveness of transfer learning over the traditional approach of training Convolutional Neural Networks from scratch.

Advanced fuzzy cognitive maps: state-space and rule-based methodology for coronary artery disease detection.

According to the World Health Organization, 50% of deaths in European Union are caused by Cardiovascular Diseases (CVD), while 80% of premature heart diseases and strokes can be prevented. In this study, a Computer-Aided Diagnostic model for a precise diagnosis of Coronary Artery Disease (CAD) is proposed. The methodology is based on State Space Advanced Fuzzy Cognitive Maps (AFCMs), an evolution of the traditional Fuzzy Cognitive Maps. Also, a rule-based mechanism is incorporated, to further increase the knowledge of the proposed system and the interpretability of the decision mechanism. The proposed method is evaluated utilizing a CAD dataset from the Department of Nuclear Medicine of the University Hospital of Patras, in Greece. Several experiments are conducted to define the optimal parameters of the proposed AFCM. Furthermore, the proposed AFCM is compared with the traditional FCM approach and the literature. The experiments highlight the effectiveness of the AFCM approach, obtaining 85.47% accuracy in CAD diagnosis, showing an improvement of +7% over the traditional approach. It is demonstrated that the AFCM approach in developing Fuzzy Cognitive Maps outperforms the conventional approach, while it constitutes a reliable method for the diagnosis of Coronary Artery Disease.

Multi-input deep learning approach for Cardiovascular Disease diagnosis using Myocardial Perfusion Imaging and clinical data.

PURPOSE: Accurate detection and treatment of Coronary Artery Disease is mainly based on invasive Coronary Angiography, which could be avoided provided that a robust, non-invasive detection methodology emerged. Despite the progress of computational systems, this remains a challenging issue. The present research investigates Machine Learning and Deep Learning methods in competing with the medical experts' diagnostic yield. Although the highly accurate detection of Coronary Artery Disease, even from the experts, is presently implausible, developing Artificial Intelligence models to compete with the human eye and expertise is the first step towards a state-of-the-art Computer-Aided Diagnostic system. METHODS: A set of 566 patient samples is analysed. The dataset contains Polar Maps derived from scintigraphic Myocardial Perfusion Imaging studies, clinical data, and Coronary Angiography results. The latter is considered as reference standard. For the classification of the medical images, the InceptionV3 Convolutional Neural Network is employed, while, for the categorical and continuous features, Neural Networks and Random Forest classifier are proposed. RESULTS: The research suggests that an optimal strategy competing with the medical expert's accuracy involves a hybrid multi-input network composed of InceptionV3 and a Random Forest. This method matches the expert's accuracy, which is 79.15% in the particular dataset. CONCLUSION: Image classification using deep learning methods can cooperate with clinical data classification methods to enhance the robustness of the predicting model, aiming to compete with the medical expert's ability to identify Coronary Artery Disease subjects, from a large scale patient dataset.

Automatic characterization of myocardial perfusion imaging polar maps employing deep learning and data augmentation.

OBJECTIVE: To investigate a deep learning technique, more specifically state-of-the-art convolutional neural networks (CNN), for automatic characterization of polar maps derived from myocardial perfusion imaging (MPI) studies for the diagnosis of coronary artery disease. SUBJECTS AND METHODS: Stress and rest polar maps corresponding to 216 patient cases from the database of the department of Nuclear Medicine of our institution were analyzed. Both attenuation-corrected (AC) and non-corrected (NAC) images were included. All patients were subjected to invasive coronary angiography within 60 days from MPI. As the initial dataset of this study was small to train a deep learning model from scratch, two strategies were followed. The first is called transfer learning. For this, we employed the state-of-the-art CNN called VGG16, which has been broadly exploited in medical imaging classification tasks. The second strategy involves data augmentation, which is achieved by the rotation of the polar maps, to expand the training set. We evaluated VGG16 with 10-fold cross-validation on the original set of images performing separate experiments for AC and NAC polar maps, as well as for their combination. The results were compared to the standard semi-quantitative polar map analysis based on summed stress and summed difference scores, as well as to the medical experts' diagnostic yield. RESULTS: With reference to the findings of coronary angiography, VGG16 achieved an accuracy of 74.53%, sensitivity 75.00% and specificity 73.43% when the AC and NAC polar maps were incorporated into one single image set. Respective figures of MPI interpretation by experienced Nuclear Medicine physicians were 75.00%, 76.97% and 70.31%. The accuracy of semi-quantitative polar map analysis was lower, 66.20% and 64.81% for AC and NAC technique, respectively. CONCLUSION: The proposed deep learning model with data augmentation techniques performed better than the conventional semi-quantitative polar map analysis and competed with doctor's expertise in this particular patient cohort and image set. The model could potentially serve as an assisting tool to support interpretation of MPI studies or could be used for teaching purposes.

Covid-19: automatic detection from X-ray images utilizing transfer learning with convolutional neural networks.

In this study, a dataset of X-ray images from patients with common bacterial pneumonia, confirmed Covid-19 disease, and normal incidents, was utilized for the automatic detection of the Coronavirus disease. The aim of the study is to evaluate the performance of state-of-the-art convolutional neural network architectures proposed over the recent years for medical image classification. Specifically, the procedure called Transfer Learning was adopted. With transfer learning, the detection of various abnormalities in small medical image datasets is an achievable target, often yielding remarkable results. The datasets utilized in this experiment are two. Firstly, a collection of 1427 X-ray images including 224 images with confirmed Covid-19 disease, 700 images with confirmed common bacterial pneumonia, and 504 images of normal conditions. Secondly, a dataset including 224 images with confirmed Covid-19 disease, 714 images with confirmed bacterial and viral pneumonia, and 504 images of normal conditions. The data was collected from the available X-ray images on public medical repositories. The results suggest that Deep Learning with X-ray imaging may extract significant biomarkers related to the Covid-19 disease, while the best accuracy, sensitivity, and specificity obtained is 96.78%, 98.66%, and 96.46% respectively. Since by now, all diagnostic tests show failure rates such as to raise concerns, the probability of incorporating X-rays into the diagnosis of the disease could be assessed by the medical community, based on the findings, while more research to evaluate the X-ray approach from different aspects may be conducted.

Non - invasive modelling methodology for the diagnosis of coronary artery disease using fuzzy cognitive maps.

Cardiovascular diseases (CVD) and strokes produce immense health and economic burdens globally. Coronary Artery Disease (CAD) is the most common type of cardiovascular disease. Coronary Angiography, which is an invasive approach for detection and treatment, is also the standard procedure for diagnosing CAD. In this work, we illustrate a Medical Decision Support System for the prediction of Coronary Artery Disease (CAD) using Fuzzy Cognitive Maps (FCM). FCMs are a promising modeling methodology, based on human knowledge, capable of dealing with ambiguity and uncertainty and learning how to adapt to the unknown or changing environment. The newly proposed MDSS is developed using the basic notions of Fuzzy Cognitive Maps and is intended to diagnose CAD utilizing specific inputs related to the patient's clinical conditions. We show that the proposed model, when tested on a dataset collected from the Laboratory of Nuclear Medicine of the University Hospital of Patras achieves accuracy of 78.2% outmatching several state-of-the-art classification algorithms.

Extracting Possibly Representative COVID-19 Biomarkers from X-ray Images with Deep Learning Approach and Image Data Related to Pulmonary Diseases.

PURPOSE: While the spread of COVID-19 is increased, new, automatic, and reliable methods for accurate detection are essential to reduce the exposure of the medical experts to the outbreak. X-ray imaging, although limited to specific visualizations, may be helpful for the diagnosis. In this study, the problem of automatic classification of pulmonary diseases, including the recently emerged COVID-19, from X-ray images, is considered. METHODS: Deep Learning has proven to be a remarkable method to extract massive high-dimensional features from medical images. Specifically, in this paper, the state-of-the-art Convolutional Neural Network called Mobile Net is employed and trained from scratch to investigate the importance of the extracted features for the classification task. A large-scale dataset of 3905 X-ray images, corresponding to 6 diseases, is utilized for training MobileNet v2, which has been proven to achieve excellent results in related tasks. RESULTS: Training the CNNs from scratch outperforms the other transfer learning techniques, both in distinguishing the X-rays between the seven classes and between Covid-19 and non-Covid-19. A classification accuracy between the seven classes of 87.66% is achieved. Besides, this method achieves 99.18% accuracy, 97.36% Sensitivity, and 99.42% Specificity in the detection of COVID-19. CONCLUSION: The results suggest that training CNNs from scratch may reveal vital biomarkers related but not limited to the COVID-19 disease, while the top classification accuracy suggests further examination of the X-ray imaging potential.