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1.
Small ; 20(11): e2304773, 2024 Mar.
Article in English | MEDLINE | ID: mdl-37936335

ABSTRACT

Practical applications of synthetic self-propelled nano and microparticles for microrobotics, targeted drug delivery, and manipulation at the nanoscale are rapidly expanding. However, fabrication limitations often hinder progress, resulting in relatively simple shapes and limited functionality. Here, taking advantage of 3D nanoscale printing, chiral micropropellers powered by the hydrogen peroxide reduction reaction are fabricated. Due to their chirality, the propellers exhibit multifunctional behavior controlled by an applied magnetic field: spinning in place (loitering), directed migration in the prescribed direction, capture, and transport of polymer cargo particles. Design parameters of the propellers are optimized by computation modeling based on mesoscale molecular dynamics. It is predicted by computer simulations, and confirmed experimentally, that clockwise rotating propellers attract each other and counterclockwise repel. These results shed light on how chirality and shape optimization enhance the functionality of synthetic autonomous micromachines.

2.
Nat Commun ; 14(1): 7050, 2023 Nov 03.
Article in English | MEDLINE | ID: mdl-37923744

ABSTRACT

Active matter demonstrates complex spatiotemporal self-organization not accessible at equilibrium and the emergence of collective behavior. Fluids comprised of microscopic Quincke rollers represent a popular realization of synthetic active matter. Temporal activity modulations, realized by modulated external electric fields, represent an effective tool to expand the variety of accessible dynamic states in active ensembles. Here, we report on the emergence of shockwave patterns composed of coherently moving particles energized by a pulsed electric field. The shockwaves emerge spontaneously and move faster than the average particle speed. Combining experiments, theory, and simulations, we demonstrate that the shockwaves originate from intermittent spontaneous vortex cores due to a vortex meandering instability. They occur when the rollers' translational and rotational decoherence times, regulated by the electric pulse durations, become comparable. The phenomenon does not rely on the presence of confinement, and multiple shock waves continuously arise and vanish in the system.

3.
PNAS Nexus ; 2(9): pgad291, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37719751

ABSTRACT

Bacteria form human and animal microbiota. They are the leading causes of many infections and constitute an important class of active matter. Concentrated bacterial suspensions exhibit large-scale turbulent-like locomotion and swarming. While the collective behavior of bacteria in Newtonian fluids is relatively well understood, many fundamental questions remain open for complex fluids. Here, we report on the collective bacterial motion in a representative biological non-Newtonian viscoelastic environment exemplified by mucus. Experiments are performed with synthetic porcine gastric mucus, natural cow cervical mucus, and a Newtonian-like polymer solution. We have found that an increase in mucin concentration and, correspondingly, an increase in the suspension's elasticity monotonously increases the length scale of collective bacterial locomotion. On the contrary, this length remains practically unchanged in Newtonian polymer solution in a wide range of concentrations. The experimental observations are supported by computational modeling. Our results provide insight into how viscoelasticity affects the spatiotemporal organization of bacterial active matter. They also expand our understanding of bacterial colonization of mucosal surfaces and the onset of antibiotic resistance due to swarming.

4.
Small ; 19(38): e2300028, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37246278

ABSTRACT

Synthetic self-propelled nano and microparticles have a growing appeal for targeted drug delivery, collective functionality, and manipulation at the nanoscale. However, it is challenging to control their positions and orientations under confinement, e.g., in microchannels, nozzles, and microcapillaries. This study reports on the synergistic effect of acoustic and flow-induced focusing in microfluidic nozzles. In a microchannel with a nozzle, the balance between the acoustophoretic forces and the fluid drag due to streaming flows generated by the acoustic field controls the microparticle's dynamics. This study manipulates the positions and orientations of dispersed particles and dense clusters inside the channel at a fixed frequency by tuning the acoustic intensity. The main findings are: first, this study successfully manipulates the positions and orientations of individual particles and dense clusters inside the channel at a fixed frequency by tuning the acoustic intensity. Second, when an external flow is applied, the acoustic field separates and selectively extrudes shape-anisotropic passive particles and self-propelled active nanorods. Finally, the observed phenomena are explained by multiphysics finite-element modeling. The results shed light on the control and extrusion of active particles in confined geometries and enable applications for acoustic cargo (e.g., drug) delivery, particle injection, and additive manufacturing via printed self-propelled active particles.

5.
Nat Commun ; 13(1): 6727, 2022 11 07.
Article in English | MEDLINE | ID: mdl-36344567

ABSTRACT

The emergence of collective motion among interacting, self-propelled agents is a central paradigm in non-equilibrium physics. Examples of such active matter range from swimming bacteria and cytoskeletal motility assays to synthetic self-propelled colloids and swarming microrobots. Remarkably, the aggregation capabilities of many of these systems rely on a theme as fundamental as it is ubiquitous in nature: communication. Despite its eminent importance, the role of communication in the collective organization of active systems is not yet fully understood. Here we report on the multi-scale self-organization of interacting self-propelled agents that locally process information transmitted by chemical signals. We show that this communication capacity dramatically expands their ability to form complex structures, allowing them to self-organize through a series of collective dynamical states at multiple hierarchical levels. Our findings provide insights into the role of self-sustained signal processing for self-organization in biological systems and open routes to applications using chemically driven colloids or microrobots.


Subject(s)
Colloids , Physics , Motion , Colloids/chemistry
6.
Rep Prog Phys ; 85(7)2022 06 13.
Article in English | MEDLINE | ID: mdl-35605446

ABSTRACT

Bacteria are among the oldest and most abundant species on Earth. Bacteria successfully colonize diverse habitats and play a significant role in the oxygen, carbon, and nitrogen cycles. They also form human and animal microbiota and may become sources of pathogens and a cause of many infectious diseases. Suspensions of motile bacteria constitute one of the most studied examples of active matter: a broad class of non-equilibrium systems converting energy from the environment (e.g., chemical energy of the nutrient) into mechanical motion. Concentrated bacterial suspensions, often termed active fluids, exhibit complex collective behavior, such as large-scale turbulent-like motion (so-called bacterial turbulence) and swarming. The activity of bacteria also affects the effective viscosity and diffusivity of the suspension. This work reports on the progress in bacterial active matter from the physics viewpoint. It covers the key experimental results, provides a critical assessment of major theoretical approaches, and addresses the effects of visco-elasticity, liquid crystallinity, and external confinement on collective behavior in bacterial suspensions.


Subject(s)
Bacteria , Animals , Elasticity , Motion , Suspensions , Viscosity
7.
Phys Rev Lett ; 128(10): 108001, 2022 Mar 11.
Article in English | MEDLINE | ID: mdl-35333075

ABSTRACT

Active matter broadly covers the dynamics of self-propelled particles. While the onset of collective behavior in homogenous active systems is relatively well understood, the effect of inhomogeneities such as obstacles and traps lacks overall clarity. Here, we study how interacting, self-propelled particles become trapped and released from a trap. We have found that captured particles aggregate into an orbiting condensate with a crystalline structure. As more particles are added, the trapped condensates escape as a whole. Our results shed light on the effects of confinement and quenched disorder in active matter.

8.
Nat Commun ; 11(1): 5365, 2020 10 23.
Article in English | MEDLINE | ID: mdl-33097711

ABSTRACT

Whereas self-propelled hard discs undergo motility-induced phase separation, self-propelled rods exhibit a variety of nonequilibrium phenomena, including clustering, collective motion, and spatio-temporal chaos. In this work, we present a theoretical framework representing active particles by continuum fields. This concept combines the simplicity of alignment-based models, enabling analytical studies, and realistic models that incorporate the shape of self-propelled objects explicitly. By varying particle shape from circular to ellipsoidal, we show how nonequilibrium stresses acting among self-propelled rods destabilize motility-induced phase separation and facilitate orientational ordering, thereby connecting the realms of scalar and vectorial active matter. Though the interaction potential is strictly apolar, both, polar and nematic order may emerge and even coexist. Accordingly, the symmetry of ordered states is a dynamical property in active matter. The presented framework may represent various systems including bacterial colonies, cytoskeletal extracts, or shaken granular media.


Subject(s)
Bacterial Physiological Phenomena , Motion , Cluster Analysis , Computer Simulation , Models, Biological , Models, Theoretical , Movement/physiology , Thermodynamics
9.
Proc Natl Acad Sci U S A ; 117(18): 9706-9711, 2020 05 05.
Article in English | MEDLINE | ID: mdl-32300010

ABSTRACT

Active matter, both synthetic and biological, demonstrates complex spatiotemporal self-organization and the emergence of collective behavior. A coherent rotational motion, the vortex phase, is of great interest because of its ability to orchestrate well-organized motion of self-propelled particles over large distances. However, its generation without geometrical confinement has been a challenge. Here, we show by experiments and computational modeling that concentrated magnetic rollers self-organize into multivortex states in an unconfined environment. We find that the neighboring vortices more likely occur with the opposite sense of rotation. Our studies provide insights into the mechanism for the emergence of coherent collective motion on the macroscale from the coupling between microscale rotation and translation of individual active elements. These results may stimulate design strategies for self-assembled dynamic materials and microrobotics.

10.
J Phys Condens Matter ; 32(19): 193001, 2020 05 08.
Article in English | MEDLINE | ID: mdl-32058979

ABSTRACT

Activity and autonomous motion are fundamental in living and engineering systems. This has stimulated the new field of 'active matter' in recent years, which focuses on the physical aspects of propulsion mechanisms, and on motility-induced emergent collective behavior of a larger number of identical agents. The scale of agents ranges from nanomotors and microswimmers, to cells, fish, birds, and people. Inspired by biological microswimmers, various designs of autonomous synthetic nano- and micromachines have been proposed. Such machines provide the basis for multifunctional, highly responsive, intelligent (artificial) active materials, which exhibit emergent behavior and the ability to perform tasks in response to external stimuli. A major challenge for understanding and designing active matter is their inherent nonequilibrium nature due to persistent energy consumption, which invalidates equilibrium concepts such as free energy, detailed balance, and time-reversal symmetry. Unraveling, predicting, and controlling the behavior of active matter is a truly interdisciplinary endeavor at the interface of biology, chemistry, ecology, engineering, mathematics, and physics. The vast complexity of phenomena and mechanisms involved in the self-organization and dynamics of motile active matter comprises a major challenge. Hence, to advance, and eventually reach a comprehensive understanding, this important research area requires a concerted, synergetic approach of the various disciplines. The 2020 motile active matter roadmap of Journal of Physics: Condensed Matter addresses the current state of the art of the field and provides guidance for both students as well as established scientists in their efforts to advance this fascinating area.

11.
Nat Commun ; 10(1): 4932, 2019 10 30.
Article in English | MEDLINE | ID: mdl-31666512

ABSTRACT

Through billions of years of evolution, microorganisms mastered unique swimming behaviors to thrive in complex fluid environments. Limitations in nanofabrication have thus far hindered the ability to design and program synthetic swimmers with the same abilities. Here we encode multi-behavioral responses in microscopic self-propelled tori using nanoscale 3D printing. We show experimentally and theoretically that the tori continuously transition between two primary swimming modes in response to a magnetic field. The tori also manipulated and transported other artificial swimmers, bimetallic nanorods, as well as passive colloidal particles. In the first behavioral mode, the tori accumulated and transported nanorods; in the second mode, nanorods aligned along the tori's self-generated streamlines. Our results indicate that such shape-programmed microswimmers have a potential to manipulate biological active matter, e.g. bacteria or cells.


Subject(s)
Nanostructures , Printing, Three-Dimensional , Swimming , Colloids , Computer-Aided Design , Magnetic Fields , Nanotubes , Nickel , Platinum
12.
Sci Rep ; 9(1): 9713, 2019 07 04.
Article in English | MEDLINE | ID: mdl-31273252

ABSTRACT

Mucus plays crucial roles in higher organisms, from aiding fertilization to protecting the female reproductive tract. Here, we investigate how anisotropic organization of mucus affects bacterial motility. We demonstrate by cryo electron micrographs and elongated tracer particles imaging, that mucus anisotropy and heterogeneity depend on how mechanical stress is applied. In shallow mucus films, we observe bacteria reversing their swimming direction without U-turns. During the forward motion, bacteria burrowed tunnels that last for several seconds and enable them to swim back faster, following the same track. We elucidate the physical mechanism of direction reversal by fluorescent visualization of the flagella: when the bacterial body is suddenly stopped by the mucus structure, the compression on the flagellar bundle causes buckling, disassembly and reorganization on the other side of the bacterium. Our results shed light into motility of bacteria in complex visco-elastic fluids and can provide clues in the propagation of bacteria-born diseases in mucus.


Subject(s)
Bacterial Physiological Phenomena , Mechanical Phenomena , Models, Theoretical , Mucus/microbiology
13.
Nanoscale ; 11(22): 10944-10951, 2019 Jun 06.
Article in English | MEDLINE | ID: mdl-31139774

ABSTRACT

To navigate in complex fluid environments, swimming organisms like fish or bacteria often reorient their bodies antiparallel or against the flow, more commonly known as rheotaxis. This reorientation motion enables the organisms to migrate against the fluid flow, as observed in salmon swimming upstream to spawn. Rheotaxis can also be realized in artificial microswimmers - self-propelled particles that mimic swimming microorganisms. Here we study experimentally and by computer simulations the rheotaxis of self-propelled gold-platinum nanorods in microfluidic channels. We observed two distinct modes of artificial rheotaxis: a high shear domain near the bottom wall of the microfluidic channel and a low shear regime in the corners. Reduced fluid drag in the corners promotes the formation of many particle aggregates that rheotax collectively. Our study provides insight into the biomimetic functionality of artificial self-propelled nanorods for dynamic self-assembly and the delivery of payloads to targeted locations.


Subject(s)
Computer Simulation , Gold , Hydrodynamics , Models, Theoretical , Motion , Nanotubes
14.
Phys Rev Lett ; 123(25): 258001, 2019 Dec 20.
Article in English | MEDLINE | ID: mdl-31922774

ABSTRACT

We study dry, dense active nematics at both particle and continuous levels. Specifically, extending the Boltzmann-Ginzburg-Landau approach, we derive well-behaved hydrodynamic equations from a Vicsek-style model with nematic alignment and pairwise repulsion. An extensive study of the phase diagram shows qualitative agreement between the two levels of description. We find in particular that the dynamics of topological defects strongly depends on parameters and can lead to "arch" solutions forming a globally polar, smecticlike arrangement of Néel walls. We show how these configurations are at the origin of the defect ordered states reported previously. This work offers a detailed understanding of the theoretical description of dense active nematics directly rooted in their microscopic dynamics.

15.
Acc Chem Res ; 51(12): 3023-3030, 2018 12 18.
Article in English | MEDLINE | ID: mdl-30379534

ABSTRACT

Active matter is a wide class of nonequilibrium systems consisting of interacting self-propelled agents transducing the energy stored in the environment into mechanical motion. Numerous examples range from microscopic cytoskeletal filaments and swimming organisms (bacteria and unicellular algae), synthetic catalytic nanomotors, colloidal self-propelled Janus particles, to macroscopic bird flocks, fish schools, and even human crowds. Active matter demonstrates a remarkable tendency toward self-organization and development of collective states with the long-range spatial order. Furthermore, active materials exhibit properties that are not present in traditional materials like plastics or ceramics: self-repair, shape change, and adaptation. A suspension of microscopic swimmers, such as motile bacteria or self-propelled colloids (active suspensions), is possibly the simplest and the most explored realization of active matter. Recent studies of active suspensions revealed a wealth of unexpected behaviors, from a dramatic reduction of the effective viscosity, enhanced mixing and self-diffusion, rectification of chaotic motion, to artificial rheotaxis (drift against the imposed flow) and cross-stream migration. To date, most of the studies of active matter are performed in isotropic suspending medium, like water with the addition of some "fuel", e.g., nutrient for bacteria or H2O2 for catalytic bimetallic AuPt nanorods. A highly structured anisotropic suspending medium represented by lyotropic liquid crystal (water-soluble) opens enormous opportunities to control and manipulate active matter. Liquid crystals exhibit properties intermediate between solid and liquids; they may flow like a liquid but respond to deformations as a solid due to a crystal-like orientation of molecules. Liquid crystals doped by a small amount of active component represent a new class of composite materials (living liquid crystals or LLCs) with unusual mechanical and optical properties. LLCs demonstrate a variety of highly organized dynamic collective states, spontaneous formation of dynamic textures of topological defects (singularities of local molecular orientation), controlled and reconfigurable transport of cargo particles, manipulation of individual trajectories of microswimmers, and many others. Besides insights into fundamental mechanisms governing active materials, living liquid crystals may have intriguing applications, such as the design of new classes of soft adaptive bioinspired materials capable to respond to physical and chemical stimuli, such as light, magnetic, and electric fields, mechanical shear, airborne pollutants, and bacterial toxins. This Account details the most recent developments in the field of LLCs and discusses how the anisotropy of liquid crystals can be harnessed to control and manipulate active materials.

16.
Nat Commun ; 9(1): 4932, 2018 11 19.
Article in English | MEDLINE | ID: mdl-30451851

ABSTRACT

The original version of this Article contained errors in Fig. 2. In Fig. 2d, the label below the blue circle incorrectly read "Si,a(t) < 0" and should have read "Si,a(t) > 0". Furthermore, the sequence of labels on the side of the bottom three figures panels in Fig. 2d from top to bottom incorrectly read "S9,70 > 0, S9,70 > 0, S9,70 < 0", and should have read "S9,70 < 0, S9,70 > 0, S9,70 < 0". Finally, in the legend to Fig. 2, the scale bar size description "Scale bar: 100µm" was incorrectly placed in the description of panel c, and should have been placed in the description of panel d. These errors have been corrected in both the PDF and HTML versions of the Article.

17.
Nat Commun ; 9(1): 4486, 2018 10 26.
Article in English | MEDLINE | ID: mdl-30367049

ABSTRACT

A suspension of swimming bacteria is possibly the simplest realization of active matter, i.e. a class of systems transducing stored energy into mechanical motion. Collective swimming of hydrodynamically interacting bacteria resembles turbulent flow. This seemingly chaotic motion can be rectified by a geometrical confinement. Here we report on self-organization of a concentrated suspension of motile bacteria Bacillus subtilis constrained by two-dimensional (2D) periodic arrays of microscopic vertical pillars. We show that bacteria self-organize into a lattice of hydrodynamically bound vortices with a long-range antiferromagnetic order controlled by the pillars' spacing. The patterns attain their highest stability and nearly perfect order for the pillar spacing comparable with an intrinsic vortex size of an unconstrained bacterial turbulence. We demonstrate that the emergent antiferromagnetic order can be further manipulated and turned into a ferromagnetic state by introducing chiral pillars. This strategy can be used to control a wide class of active 2D systems.

18.
Phys Rev Lett ; 120(23): 238101, 2018 Jun 08.
Article in English | MEDLINE | ID: mdl-29932716

ABSTRACT

Assemblages of self-propelled particles, often termed active matter, exhibit collective behavior due to competition between neighbor alignment and noise-induced decoherence. However, very little is known of how the quenched (i.e., time-independent) disorder impacts active motion. Here we report on the effects of quenched disorder on the dynamics of self-propelled point particles. We identified three major types of quenched disorder relevant in the context of active matter: random torque, force, and stress. We demonstrate that even in the absence of external fluctuations ("cold active matter"), quenched disorder results in nontrivial dynamic phases not present in their "hot" counterpart. In particular, by analyzing when the equations of motion exhibit a Hamiltonian structure and when attractors may be present, we identify in which scenarios particle trapping, i.e., the asymptotic convergence of particle trajectories to bounded areas in space ("traps"), can and cannot occur. Our study provides new fundamental insights into active systems realized by self-propelled particles on natural and synthetic disordered substrates.

19.
Nat Commun ; 9(1): 1322, 2018 04 03.
Article in English | MEDLINE | ID: mdl-29615618

ABSTRACT

Suspensions of motile bacteria or synthetic microswimmers, termed active matter, manifest a remarkable propensity for self-organization, and formation of large-scale coherent structures. Most active matter research deals with almost homogeneous in space systems and little is known about the dynamics of strongly heterogeneous active matter. Here we report on experimental and theoretical studies on the expansion of highly concentrated bacterial droplets into an ambient bacteria-free fluid. The droplet is formed beneath a rapidly rotating solid macroscopic particle inserted in the suspension. We observe vigorous instability of the droplet reminiscent of a violent explosion. The phenomenon is explained in terms of continuum first-principle theory based on the swim pressure concept. Our findings provide insights into the dynamics of active matter with strong density gradients and significantly expand the scope of experimental and analytic tools for control and manipulation of active systems.


Subject(s)
Bacillus subtilis/physiology , Bacteria/metabolism , Bacterial Physiological Phenomena , Algorithms , Computer Simulation , Linear Models , Microscopy, Fluorescence , Motion , Rotation
20.
Nanoscale ; 10(14): 6639-6650, 2018 Apr 05.
Article in English | MEDLINE | ID: mdl-29582025

ABSTRACT

Nature has amassed an impressive array of structures that afford protection from microbial colonization/infection when displayed on the exterior surfaces of organisms. Here, controlled variation of the features of mimetics derived from etched silicon allows for tuning of their antimicrobial efficacy. Materials with nanopillars up to 7 µm in length are extremely effective against a wide range of microbial species and exceed the performance of natural surfaces; in contrast, materials with shorter/blunter nanopillars (<2 µm) selectively killed specific species. Using a combination of microscopies, the mechanisms by which bacteria are killed are demonstrated, emphasizing the dependence upon pillar density and tip geometry. Additionally, real-time imaging reveals how cells are immobilized and killed rapidly. Generic or selective protection from microbial colonization could be conferred to surfaces [for, e.g., internal medicine, implants (joint, dental, and cosmetic), food preparation, and the agricultural industry] patterned with these materials as coatings.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacteria/drug effects , Biomimetic Materials/pharmacology , Nanostructures , Prostheses and Implants , Surface Properties
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