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1.
Mar Pollut Bull ; 197: 115679, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37890314

ABSTRACT

The soundscape is an intrinsic property of an ecosystem and influences the species that live in it. Here, we examined for the first time the soundscape of a beach, one of the most dynamic ecosystems on Earth, where every year the loggerhead sea turtle Caretta caretta lays eggs. The aim of this work was to analyze the acoustic components (biophony, anthropophony and geophony) to which turtles embryos were exposed throughout the development and the post-hatching period. The acoustic monitoring was carried out on the volcanic island of Linosa (central Mediterranean Sea, Strait of Sicily), during the months of July and August 2022, close to two turtle nests. Results revealed that all the acoustic levels (octave bands from 4 Hz to 16 kHz, and total 1-24,000 Hz band) showed lower values in July, and during the night. Furthermore, above 1 kHz the levels decreased and had very little variability. Anthropogenic noise was the main component of the soundscape and consisted of marine and land traffic, that affected sound levels directly or via seismic tremors. When the beach was exposed to the breaking waves, the latters were the first contributor to the noise up to 1 kHz. The only recognized biophony was represented by the shearwater choruses in July (at the frequency band 700-1500 Hz), but they had a negligible weight on the soundscape. Finally, human speech contributed to the soundscape at higher frequencies (1-8 kHz). These outcomes show that the embryos and the post-hatching turtles are exposed to a high anthropogenic noise level, which the effects of are still unknown.


Subject(s)
Ecosystem , Turtles , Animals , Humans , Seasons , Sicily , Mediterranean Sea
2.
Mol Phylogenet Evol ; 135: 210-221, 2019 06.
Article in English | MEDLINE | ID: mdl-30831270

ABSTRACT

A comprehensive phylogeny of the genus Salaria based on mitochondrial and nuclear markers grouped the extant species of the genus in well-characterised marine and freshwater clades, thus rejecting the hypothesis of a polytypic origin of the freshwater Salaria populations and supporting the occurrence of a single invasion event of the inland waters by the genus. Based on both mitochondrial and nuclear DNA datasets, the Salaria species of the freshwater clade proved to be vicariant taxa originating from a common ancestor which could possibly spread throughout the circum-Mediterranean inland waters during the late Miocene Messinian salinity crisis, then experiencing a process of allopatric differentiation after the re-flooding of the Mediterranean basin. Within the marine clade, although the nuDNA datasets showed the existence of well-supported subclades in accordance to the morphological identification of the studied specimens, one of the two subclades obtained in the phylogenetic tree based on the mtDNA dataset included both S. basilisca and S. pavo specimens, thus failing to find the two species as reciprocally monophyletic. Such a mito-nuclear discordance is here ascribed to multiple mtDNA unidirectional introgression events from S. basilisca to S. pavo, and the molecular diversity pattern of the marine Salaria species is here ascribed to a Pleistocene speciation event nowadays partly concealed by the occurrence of introgressive hybridization phenomena between the two taxa. Our results urge for prudence when implementing DNA barcoding approaches since, in the presence of mito-nuclear discordance phenomena, single-marker mtDNA-only analyses might lead to significant misidentifications.


Subject(s)
Aquatic Organisms/genetics , DNA, Mitochondrial/genetics , Hybridization, Genetic , Perciformes/genetics , Phylogeny , Animals , Bayes Theorem , Cell Nucleus/genetics , Evolution, Molecular , Geography , Haplotypes/genetics , Mitochondria/genetics , Species Specificity
3.
Mar Environ Res ; 90: 1-8, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23769335

ABSTRACT

The identification of boundaries of genetic demes is one of the major goals for fishery management, and few Mediterranean commercial species have not been studied from a genetic point of view yet. The deep-water rose shrimp Parapenaeus longirostris (Lucas, 1846) is one of the most important components of commercial landings in Mediterranean, its fishery aspects have received much attention, regrettably without any concern for the genetic architecture of its populations. The population structure in the central and eastern Mediterranean Sea (captures from six Italian and two Greek landings) has been analysed on the basis of surveys carried out with mitochondrial and AFLP markers. Data revealed the presence of a gradual discrepancy along a west-east axis. This species, occurring mainly at a depth of between 100 and 400 m, is not strongly confined in isolated demes, but it demonstrates an 'Isolation By Distance' model, within the Mediterranean Sea, which includes geographical areas with a some degree of isolation. The role of hydrodynamic forces, such as currents, water fronts, is discussed; and a further evidence of the 'Levantine isolation' within Mediterranean basin is shown.


Subject(s)
Genetic Variation , Penaeidae/genetics , Amplified Fragment Length Polymorphism Analysis , Animals , DNA Fingerprinting , DNA, Mitochondrial/genetics , DNA, Mitochondrial/metabolism , Genetic Markers , Mediterranean Sea , Penaeidae/classification , Penaeidae/metabolism , Phylogeny , Polymerase Chain Reaction , Sequence Analysis, DNA
4.
J Fish Biol ; 76(5): 1220-7, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20409173

ABSTRACT

The objective of this study was to characterize the genetic structure of two Balkan brown trout morphotypes, Salmo macedonicus and Salmo pelagonicus, and to test whether molecular traits support the species' status proposed by traditional morphological identification. The mitochondrial DNA 12S-rDNA, cyt b and control region genes were sequenced in 15 specimens collected from three localities in the Former Yugoslav Republic of Macedonia. The results of these markers did not support the taxonomic category of species but confirmed the existence of two morphotypes, Salmo trutta macedonicus and Salmo trutta pelagonicus, in the Aegean-Adriatic lineages of the Salmo trutta species complex.


Subject(s)
Genetic Variation , Genetics, Population , Trout/genetics , Animals , Cluster Analysis , DNA, Mitochondrial/genetics , Europe , Haplotypes , Phylogeny , Sequence Analysis, DNA , Trout/anatomy & histology
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