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1.
Toxicol Lett ; 293: 207-215, 2018 Sep 01.
Article in English | MEDLINE | ID: mdl-29129798

ABSTRACT

Post-exposure nerve agent treatment usually includes administration of an oxime, which acts to restore function of the enzyme acetylcholinesterase (AChE). For immediate treatment of military personnel, this is usually administered with an autoinjector device, or devices containing the oxime such as pralidoxime, atropine and diazepam. In addition to the autoinjector, it is likely that personnel exposed to nerve agents, particularly by the percutaneous route, will require further treatment at medical facilities. As such, there is a need to understand the relationship between dose rate, plasma concentration, reactivation of AChE activity and efficacy, to provide supporting evidence for oxime infusions in nerve agent poisoning. Here, it has been demonstrated that intravenous infusion of HI-6, in combination with atropine, is efficacious against a percutaneous VX challenge in the conscious male Dunkin-Hartley guinea-pig. Inclusion of HI-6, in addition to atropine in the treatment, improved survival when compared to atropine alone. Additionally, erythrocyte AChE activity following poisoning was found to be dose dependent, with an increased dose rate of HI-6 (0.48mg/kg/min) resulting in increased AChE activity. As far as we are aware, this is the first study to correlate the pharmacokinetic profile of HI-6 with both its pharmacodynamic action of reactivating nerve agent inhibited AChE and with its efficacy against a persistent nerve agent exposure challenge in the same conscious animal.


Subject(s)
Chemical Warfare Agents/poisoning , Cholinesterase Reactivators/therapeutic use , Nerve Agents/poisoning , Organothiophosphorus Compounds/antagonists & inhibitors , Organothiophosphorus Compounds/poisoning , Oximes/therapeutic use , Pyridinium Compounds/therapeutic use , Acetylcholinesterase/blood , Acetylcholinesterase/metabolism , Animals , Atropine/pharmacology , Cholinesterase Reactivators/administration & dosage , Cholinesterase Reactivators/pharmacokinetics , Dose-Response Relationship, Drug , Guinea Pigs , Infusions, Intravenous , Male , Muscarinic Antagonists/pharmacology , Organothiophosphorus Compounds/administration & dosage , Oximes/administration & dosage , Oximes/pharmacokinetics , Pyridinium Compounds/administration & dosage , Pyridinium Compounds/pharmacokinetics , Survival Analysis
2.
Antimicrob Agents Chemother ; 58(9): 5510-8, 2014 Sep.
Article in English | MEDLINE | ID: mdl-25001305

ABSTRACT

Encapsulation of antibiotics may improve treatment of intracellular infections by prolonging antibiotic release and improving antibiotic uptake into cells. In this study, liposome-encapsulated ciprofloxacin for inhalation (CFI) was evaluated as a postexposure therapeutic for the treatment of Coxiella burnetii, the causative agent of Q fever. Intranasal treatment of male A/Jola (A/J) mice with CFI (50 mg/kg of body weight) once daily for 7 days protected mice against weight loss and clinical signs following an aerosol challenge with C. burnetii. In comparison, mice treated twice daily with oral ciprofloxacin or doxycycline (50 mg/kg) or phosphate-buffered saline (PBS) lost 15 to 20% body weight and exhibited ruffled fur, arched backs, and dehydration. Mice were culled at day 14 postchallenge. The weights and bacterial burdens of organs were determined. Mice treated with CFI exhibited reduced splenomegaly and reduced bacterial numbers in the lungs and spleen compared to mice treated with oral ciprofloxacin or doxycycline. When a single dose of CFI was administered, it provided better protection against body weight loss than 7 days of treatment with oral doxycycline, the current antibiotic of choice to treat Q fever. These data suggest that CFI has potential as a superior antibiotic to treat Q fever.


Subject(s)
Ciprofloxacin/administration & dosage , Liposomes/administration & dosage , Q Fever/drug therapy , Administration, Inhalation , Administration, Intranasal/methods , Animals , Anti-Bacterial Agents/administration & dosage , Disease Models, Animal , Doxycycline/administration & dosage , Lung/microbiology , Male , Mice , Q Fever/microbiology , Spleen/microbiology
3.
Chromosome Res ; 22(2): 179-90, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24941912

ABSTRACT

Meiosis is an evolutionary conserved mechanism that produces haploid gametes and is essential for the sexual reproduction of higher eukaryotes. Since the late nineteenth century, meiosis has been studied in plants due their large chromosomes compared with other organisms and due to advances in microscopy and cytological approaches. On the other hand, non-plant model organisms like budding yeast have been widely used recently in order to characterise the molecular and functional aspects of meiosis. Arabidopsis arose as a new meiotic model for plants during the last decade of the twentieth century. This emergence was sustained by different molecular and genetic advances, mainly by completing the full genome sequence in 2000. Since then, further development of molecular technologies and the cytological methodologies to analyse the meiotic dynamics in Arabidopsis have permitted researchers to establish plant meiosis at the forefront of international research. Some key plant meiotic recombination events have been established in Arabidopsis. These advances have placed researchers into the position to transfer their knowledge from this plant meiotic model to crops and are likely to have an impact on plant breeding and the development of agriculture in future years.


Subject(s)
Arabidopsis/genetics , Chromosome Pairing/genetics , Chromosomes, Plant/genetics , Genes, Plant , Meiosis/genetics , Arabidopsis/classification , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , DNA, Plant/genetics , Evolution, Molecular , Recombination, Genetic
4.
Plant Reprod ; 26(3): 197-208, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23884434

ABSTRACT

Shugoshin is a protein conserved in eukaryotes and protects sister chromatid cohesion at centromeres in meiosis. In our study, we identified the homologs of SGO1 and SGO2 in Arabidopsis thaliana. We show that AtSGO1 is necessary for the maintenance of centromere cohesion in meiosis I since atsgo1 mutants display premature separation of sister chromatids starting from anaphase I. Furthermore, we show that the localization of the specific centromeric cohesin AtSYN1 is not affected in atsgo1, suggesting that SGO1 centromere cohesion maintenance is not mediated by protection of SYN1 from cleavage. Finally, we show that AtSGO2 is dispensable for both meiotic and mitotic cell progression in Arabidopsis.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/cytology , Arabidopsis/metabolism , Centromere/metabolism , Meiosis/physiology , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Meiosis/genetics
5.
J Biomed Mater Res A ; 93(4): 1470-81, 2010 Jun 15.
Article in English | MEDLINE | ID: mdl-19967758

ABSTRACT

In an attempt to obviate the drawbacks of nerve autograft, ultrathin microporous biodegradable PCL and PCL/PLA films were tested for their compatibility with motor neuron-like NG108-15 cells and primary Schwann cells. Data obtained from MTS colorimetric and DNA fluorimetric assays showed that both cell lines readily attached and proliferated on these materials. Images taken using scanning electron microscope and fluorescence microscope confirmed these observations. Enhanced cell-surface interaction was achieved by pretreating the films in NaOH solution. Importantly, NG108-15 cells could be induced into differentiated phenotype with long, un-branched neurites growing across the surface of the materials. The bipolar spindle-shaped phenotype of Schwann cells was also retained on these scaffolds. Positive immunochemical staining using antibodies against neurofilament for NG108-15 cells and S100 for Schwann cells indicated the expression of these marker proteins. In a small-scaled pilot testing, the performance of PCL conduits in bridging up a 10 mm gap in rat sciatic nerve model was assessed. Immunohistochemical staining showed that regenerated nerve tissue and penetrated Schwann cells have the potential to span the whole length of the conduit in 2 weeks.


Subject(s)
Lactic Acid/chemistry , Neurons/pathology , Polyesters/chemistry , Polymers/chemistry , Animals , Biocompatible Materials/chemistry , Cell Membrane/metabolism , Female , Immunohistochemistry/methods , In Vitro Techniques , Materials Testing , Microscopy, Electron/methods , Peripheral Nervous System/pathology , Rats , Rats, Sprague-Dawley , Sodium Hydroxide/chemistry , Surface Properties
6.
Cytogenet Genome Res ; 124(3-4): 193-201, 2009.
Article in English | MEDLINE | ID: mdl-19556773

ABSTRACT

The ends of linear eukaryotic chromosomes are protected by the telomere, a specialised nucleoprotein complex. The primary role of the telomere is to protect the chromosome ends from being degraded or recognised and processed as double strand breaks. Additionally, the telomeres are involved in interphase chromosome organisation and also in chromosome pairing, synapsis and movement during meiotic prophase. The main emphasis of this review is concerned with the distribution and dynamics of the telomeres in the somatic cell and meiocytes of plants, focusing on the model plant Arabidopsis thaliana. In Arabidopsis the telomeres are organised around the nucleolus in both the somatic and meiotic interphase. One of the outstanding questions in meiosis is how homologous chromosomes pair (align) and synapse during meiotic prophase. Recent attention has been paid to the bouquet formation, a nearly universal event, during which the telomeres cluster on the nuclear membrane in early prophase. It has been suggested that because the telomeres are in close proximity this would enhance their pairing and subsequent synapsis of the homologues. In Arabidopsis we observe that the telomeres are paired homologously in early meiosis whilst still arranged around the nucleolus. They are moved to the nuclear membrane preceding synapsis and reveal only a loose clustering, which may represent a transient bouquet. On completion of synapsis the paired telomeres are dispersed and remain attached to the nuclear membrane until diplotene when they dissociate from the nuclear membrane. We also discuss the prospects for live imaging of the telomeres in Arabidopsis.


Subject(s)
Arabidopsis/physiology , Cell Nucleus/physiology , Chromosomes, Plant/physiology , Meiosis/physiology , Telomere/physiology , Arabidopsis/ultrastructure , Cell Cycle/physiology , Cell Nucleus/ultrastructure , Chromosomes, Plant/ultrastructure , Telomere/ultrastructure
7.
Cytogenet Genome Res ; 120(3-4): 241-6, 2008.
Article in English | MEDLINE | ID: mdl-18504353

ABSTRACT

The recent origin of sex chromosomes in plant species provides an opportunity to study the early stages of sex chromosome evolution. This review focuses on the cytogenetic aspects of the analysis of sex chromosome evolution in plants and in particular, on the best-studied case, the sex chromosomes in Silene latifolia. We discuss the emerging picture of sex chromosome evolution in plants and the further work that is required to gain better understanding of the similarities and differences between the trends in animal and plant sex chromosome evolution. Similar to mammals, suppression of recombination between the X and Y in S. latifolia species has occurred in several steps, however there is little evidence that inversions on the S. latifolia Y chromosome have played a role in cessation of X/Y recombination. Secondly, in S. latifolia there is a lack of evidence for genetic degeneration of the Y chromosome, unlike the events documented in mammalian sex chromosomes. The insufficient number of genes isolated from this and other plant sex chromosomes does not allow us to generalize whether the trends revealed on S. latifolia Y chromosome are general for other dioecious plants. Isolation of more plant sex-linked genes and their cytogenetic mapping with fluorescent in situ hybridisation (FISH) will ultimately lead to a much better understanding of the processes driving sex chromosome evolution in plants.


Subject(s)
Biological Evolution , Chromosomes, Plant/genetics , Plants/genetics , Cytogenetics , In Situ Hybridization, Fluorescence , Meiosis/genetics , Mitosis/genetics , Recombination, Genetic , Silene/genetics
8.
Br J Dermatol ; 156(4): 687-92, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17326748

ABSTRACT

BACKGROUND: Several general practitioner (GP)-prescribed and over-the-counter therapies for warts and verrucae are available. However, the cost-effectiveness of these treatments is unknown. OBJECTIVES: To compare the cost-effectiveness of different treatments for cutaneous warts. METHODS: We designed a decision-analytic Markov simulation model based on systematic review evidence to estimate the cost-effectiveness of various treatments. The outcome measures studied are percentage of patients cured, cost of treatment and incremental cost-effectiveness ratio for each treatment, compared with no treatment, after 18 weeks. RESULTS: Duct tape was most cost-effective but published evidence of its effectiveness is sparse. Salicylic acid was the most cost-effective over-the-counter treatment commonly used. Cryotherapy administered by a GP was less cost-effective than GP-prescribed salicylic acid and less cost-effective than cryotherapy administered by a nurse. CONCLUSIONS: Duct tape could be adopted as the primary treatment for cutaneous warts if its effectiveness is verified by further rigorous trials. Nurse-administered cryotherapy is likely to be more cost-effective than GP-administered cryotherapy.


Subject(s)
Anti-Infective Agents/therapeutic use , Cryotherapy/economics , Dermatologic Agents/economics , Dermatologic Agents/therapeutic use , Salicylic Acid/economics , Warts/therapy , Cost-Benefit Analysis , Humans , Salicylic Acid/therapeutic use , Treatment Outcome
9.
Biochem Soc Trans ; 34(Pt 4): 542-4, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16856855

ABSTRACT

Immunocytochemistry reveals that the Arabidopsis mismatch repair proteins AtMSH4, AtMLH3 and AtMLH1 are expressed during prophase I of meiosis. Expression of AtMSH4 precedes AtMLH3 and AtMLH1 which co-localize as foci during pachytene. Co-localization between AtMSH4 and AtMLH3 occurs, but appears transient. AtMLH3 foci are not detected in an Atmsh4 mutant. However, localization of AtMSH4 is unaffected in Atmlh3, suggesting that recombination may proceed to dHj (double Holliday junction) formation. Mean chiasma frequency in Atmsh4 is reduced to 1.55 compared with 9.86 in wild-type. In contrast with wild-type, the distribution of residual crossovers in Atmsh4 closely fits a Poisson distribution. This is consistent with a two-pathway model for meiotic crossing-over whereby most crossovers occur via an AtMSH4-dependent pathway that is subject to interference, with the remaining crossovers arising via an interference-independent pathway. Loss of AtMLH3 results in an approx. 60% reduction in crossovers. Results suggest that dHj resolution can occur, but in contrast with wild-type where most or all dHjs are directed to form crossovers, the outcome is biased in favour of a non-crossover outcome. The results are compatible with a model whereby the MutL complex maintains or imposes a dHj conformation that ensures crossover formation.


Subject(s)
Arabidopsis/cytology , Arabidopsis/genetics , Carrier Proteins/genetics , DNA Repair Enzymes/genetics , Nuclear Proteins/genetics , Recombination, Genetic/genetics , Humans , Meiosis
10.
Health Technol Assess ; 10(25): iii, ix-87, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16849001

ABSTRACT

OBJECTIVES: To estimate the costs of commonly used treatments for cutaneous warts, as well as their health benefits and risk. To create an economic decision model to evaluate the cost-effectiveness of these treatments, and, as a result, assess whether a randomised controlled trial (RCT) would be feasible and cost-effective. DATA SOURCES: Focus groups, structured interviews and observation of practice. Postal survey sent to 723 patients. A recently updated Cochrane systematic review and published cost and prescribing data. REVIEW METHODS: Primary and secondary data collection methods were used to inform the development of an economic decision model. Data from the postal survey provided estimates of the effectiveness of wart treatments in a primary care setting. These estimates were compared with outcomes reported in the Cochrane review of wart treatment, which were largely obtained from RCTs conducted in secondary care. A decision model was developed including a variety of over-the-counter (OTC) and GP-prescribed treatments. The model simulated 10,000 patients and adopted a societal perspective. RESULTS: OTC treatments were used by a substantial number of patients (57%) before attending the GP surgery. By far the most commonly used OTC preparation was salicylic acid (SA). The results of the economic model suggested that of the treatments prescribed by a GP, the most cost-effective treatment was SA, with an incremental cost-effectiveness ratio (ICER) of 2.20 pound/% cured. The ICERs for cryotherapy varied widely (from 1.95 to 7.06 pound/% cured) depending on the frequency of applications and the mode of delivery. The most cost-effective mode of delivery was through nurse-led cryotherapy clinics (ICER = 1.95 pound/% cured) and this could be a cost-effective alternative to GP-prescribed SA. Overall, the OTC therapies were the most cost-effective treatment options. ICERs ranged from 0.22 pound/% cured for OTC duct tape and 0.76 pound/% cured for OTC cryotherapy to 1.12 pound/% cured for OTC SA. However, evidence in support of OTC duct tape and OTC cryotherapy is very limited. Side-effects were commonly reported for both SA and cryotherapy, particularly a burning sensation, pain and blistering. CONCLUSIONS: Cryotherapy delivered by a doctor is an expensive option for the treatment of warts in primary care. Alternative options such as GP-prescribed SA and nurse-led cryotherapy clinics provide more cost-effective alternatives, but are still expensive compared with self-treatment. Given the minor nature of most cutaneous warts, coupled with the fact that the majority spontaneously resolve in time, it may be concluded that a shift towards self-treatment is warranted. Although both duct tape and OTC cryotherapy appear promising new self-treatment options from both a cost and an effectiveness perspective, more research is required to confirm the efficacy of these two methods of wart treatment. If these treatments are shown to be as cost-effective as or more cost-effective than conventional treatments, then a shift in service delivery away from primary care towards more OTC treatment is likely. A public awareness campaign would be useful to educate patients about the self-limiting nature of warts and the possible alternative OTC treatment options available. Two future RCTs are recommended for consideration: a trial of SA compared with nurse-led cryotherapy in primary care, and a trial of home treatments. Greater understanding of the efficacy of these home treatments will give doctors a wider choice of treatment options, and may help to reduce the overall demand for cryotherapy in primary care.


Subject(s)
Cryotherapy/economics , Decision Making , Salicylic Acid/economics , Warts/surgery , Cost-Benefit Analysis , Female , Focus Groups , Humans , Interviews as Topic , Male , Treatment Outcome , United Kingdom
11.
Cytogenet Genome Res ; 109(1-3): 181-9, 2005.
Article in English | MEDLINE | ID: mdl-15753575

ABSTRACT

The analysis of meiosis in higher plants has benefited considerably in recent years from the completion of the genome sequence of the model plant Arabidopsis thaliana and the development of cytological techniques for this species. A combination of forward and reverse genetics has provided important routes toward the identification of meiotic genes in Arabidopsis. Nevertheless identification of certain meiotic genes remains a challenge due to problems such as limited sequence conservation between species, existence of closely related gene families and in some cases functional redundancy between gene family members. Hence there is a requirement to develop new experimental approaches that can be used in conjunction with existing methods to enable a greater range of plant meiotic genes to be identified. As one potential route towards this goal we have initiated a proteomics-based approach. Unfortunately, the small size of Arabidopsis anthers makes an analysis in this species technically very difficult. Therefore we have initially focussed on Brassica oleracea which is closely related to Arabidopsis, but has the advantage of possessing significantly larger anthers. The basic strategy has been to use peptide mass-finger printing and matrix-assisted laser desorption ionization time of flight mass spectrometry to analyse proteins expressed in meiocytes during prophase I of meiosis. Initial experiments based on the analysis of proteins from staged anther tissue proved disappointing due to the low level of detection of proteins associated with meiosis. However, by extruding meiocytes in early prophase I from individual anthers prior to analysis a significant enrichment of meiotic proteins has been achieved. Analysis suggests that at least 18% of the proteins identified by this route have a putative meiotic function and that this figure could be as high as one-third of the total. Approaches to increase the enrichment of proteins involved in meiotic recombination and chromosome synapsis are also described.


Subject(s)
Brassica/cytology , Brassica/genetics , Plant Proteins/genetics , Plants/genetics , Proteome , Cell Nucleus/genetics , Cell Nucleus/ultrastructure , Flowers/cytology , Flowers/genetics , Meiosis , Plant Proteins/isolation & purification
12.
Genome ; 48(6): 1093-103, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16391678

ABSTRACT

The close relationship between Brassica oleracea and Arabidopsis thaliana has been used to explore the genetic and physical collinearity of the two species, focusing on an inverted segmental chromosome duplication within linkage group O6 of B. oleracea. Genetic evidence suggests that these segments share a common origin with a region of Arabidopsis chromosome 1. Brassica oleracea and Arabidopsis bacterial artificial chromosome probes have been used for fluorescence in situ hybridization analysis of B. oleracea pachytene chromosomes to further characterize the inverted duplication. This has been highly effective in increasing the local resolution of the cytogenetic map. We have shown that the physical order of corresponding genetic markers is highly conserved between the duplicated regions in B. oleracea and the physical lengths of the regions at pachytene are similar, while the genetic distances are considerably different. The physical marker order is also well conserved between Arabidopsis and B. oleracea, with only one short inversion identified. Furthermore, the relative physical distances between the markers in one segment of B. oleracea and Arabidopsis have stayed approximately the same. The efficacy of using fluorescence in situ hybridization, together with other forms of physical and genetic mapping, for elucidating such issues relating to synteny is discussed.


Subject(s)
Arabidopsis/genetics , Brassica/genetics , Chromosomes, Artificial, Bacterial , Chromosomes, Plant , DNA Probes , Gene Duplication , Genetic Markers , In Situ Hybridization, Fluorescence , Physical Chromosome Mapping
13.
Genetics ; 165(3): 1533-40, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14668400

ABSTRACT

Meiosis was analyzed cytogenetically in autotetraploids of Arabidopsis, including both established lines and newly generated autotetraploid plants. Fluorescent in situ hybridization with 5S and 45S rDNA probes was used to identify the different chromosomes at metaphase I of meiosis. Multivalents were observed frequently in all the lines analyzed, but there were significant differences in multivalent frequency not only between the newly generated tetraploids and the established lines but also among the different established lines. The new tetraploids showed high multivalent frequencies, exceeding the theoretical 66.66% predicted by the simple random-end pairing model, in some cases significantly, thus indicating that Arabidopsis autotetraploids have more than two autonomous pairing sites per chromosome, despite their small sizes. The established lines showed fewer multivalents than the new autotetraploids did, but the extent of this reduction was strongly line and chromosome dependent. One line in particular showed a large reduction in multivalents and a concomitant increase in bivalents, while the other lines showed lesser reductions in multivalents. The reduction in multivalents was not uniformly distributed across chromosomes. The smaller chromosomes, especially chromosomes 2 and 4, showed the most marked reductions while the largest chromosome (1) showed virtually no reduction compared to the new tetraploids. It is concluded that the established autotetraploid lines have undergone a partial diploidization of meiosis, but not necessarily genetical diploidization, since their creation. Possible mechanisms for the resulting change in meiotic chromosome behavior are discussed.


Subject(s)
Arabidopsis/cytology , Meiosis/genetics , Polyploidy , Arabidopsis/genetics , In Situ Hybridization, Fluorescence
14.
Chromosome Res ; 11(3): 205-15, 2003.
Article in English | MEDLINE | ID: mdl-12769288

ABSTRACT

Arabidopsis has emerged as an important model for the analysis of meiosis in Angiosperm plants, creating an interesting and useful parallel to other model organisms. This development has been underpinned by advances in the molecular biology and genetics of Arabidopsis, especially the determination of its entire genome sequence. However, these advances alone would have been insufficient without the development of improved methods for cytological analysis and cytogenetic investigation of meiotic nuclei and chromosomes. A basic descriptive framework of meiosis in Arabidopsis has been established based on these procedures. In addition, molecular cytogenetic and immunocytological techniques have provided supplementary detailed information on some aspects of meiosis. Gene identification and characterization have proceeded in parallel with these developments based on both forward and reverse genetic procedures utilising the considerable range of Arabidopsis genetic and molecular resources, such as T-DNA and transposon tagged lines as well as the genomic DNA database, in combination with cytological analysis. A diverse range of meiotic genes have been identified and analysed by these procedures and in selected cases they have been subjected to detailed functional analysis. This review focuses on genes that are involved in the key meiotic events of chromosome synapsis and recombination.


Subject(s)
Arabidopsis/genetics , Chromosome Pairing , Chromosomes, Plant/genetics , Meiosis/genetics , Recombination, Genetic/genetics , Arabidopsis/cytology , Cytological Techniques
15.
Genetics ; 162(3): 1415-22, 2002 Nov.
Article in English | MEDLINE | ID: mdl-12454084

ABSTRACT

Natural variation in meiotic recombination frequency in Arabidopsis thaliana has been assessed by analyzing chiasma frequency variation among a range of geographically and ecologically diverse accessions. Fifty pollen mother cells at metaphase I of meiosis were analyzed from each of eight accessions and fluorescence in situ hybridization was applied to enable identification of all 10 chromosome arms. There was no significant variation in mean chiasma frequency between plants within accessions, but there was significant variation between accessions. Further analysis confirmed this finding and identified two particular accessions, Cvi and Ler, as having chiasma frequencies significantly lower than those of the other accessions. The analysis also revealed that the pattern of chiasma distribution between arms and among chromosomes is not consistent over accessions. Further detailed analyses were conducted on each individual chromosome (1-5) in turn, revealing that chromosome 4, one of the acrocentric chromosomes, is the least variable while the other acrocentric chromosome (2) is the most variable. These findings indicate the existence of recombination regulatory elements in Arabidopsis and we conclude that it may be possible in the future to identify these elements and determine their mode of action. The practical implications of such developments are considerable.


Subject(s)
Arabidopsis/genetics , Crossing Over, Genetic , Genetic Variation , Analysis of Variance , Chromosomes/genetics
16.
Biotechnol Prog ; 18(3): 623-8, 2002.
Article in English | MEDLINE | ID: mdl-12052082

ABSTRACT

Homogeneous cell lines are essential in industry and research if reliable and reproducible data are to be obtained. The Spodoptera frugiperda (Sf-9) cell line routinely used for the production of recombinant proteins was found to be heterogeneous, containing a mixture of diploid and tetraploid cells. Using dilution-cloning techniques, diploid and tetraploid subpopulations were isolated from a Sf-9 parental cell line, and their cytogenetic state was monitored using Vinblastine to arrest cells in mitosis. Flow cytometry was used to obtain a snapshot of the predominant subpopulations present to verify the karyological results. The rate at which clonal populations digress into the heterogeneous state was found to be more rapid for the diploid subpopulation, with the emergence of tetraploid cells after only 11 passages, than for the tetraploid subpopulation, where diploid clones appeared after 18 passages. The chromosomes in both diploid and tetraploid subpopulations as well as the parental cell line were found to spontaneously fragment during growth and expansion processes, giving rise to variable chromosome numbers. DNA analysis of cell lines obtained from laboratories worldwide have shown that the Sf-9 cell line used for the production of many recombinant proteins is cytologically unstable, leading to varying degrees of polyploidal state depending on its culture history and supplier.


Subject(s)
Chromosomes , Spodoptera/genetics , Animals , Cell Line , Diploidy , Flow Cytometry , Karyotyping
17.
Theor Appl Genet ; 104(2-3): 165-170, 2002 Feb.
Article in English | MEDLINE | ID: mdl-12582682

ABSTRACT

Cnr ( Colourless non-ripening) is a dominant pleiotropic ripening mutation of tomato ( Lycopersicon esculentum) which has previously been mapped to the proximal region of tomato chromosome 2. We describe the fine mapping of the Cnr locus using both linkage analysis and fluorescence in situ hybridisation (FISH). Restriction fragment length polymorphism (RFLP)-, amplified restriction fragment polymorphism (AFLP)-, and cleaved amplified polymorphic sequence (CAPS)-based markers, linked to the Cnrlocus were mapped onto the long arm of chromosome 2. Detailed linkage analysis indicated that the Cnr locus was likely to lie further away from the top of the long arm than previously thought. This was confirmed by FISH, which was applied to tomato pachytene chromosomes in order to gain an insight into the organisation of hetero- and euchromatin and its relationship to the physical and genetic distances in the Cnr region. Three molecular markers linked to Cnr were unambiguously located by FISH to the long arm of chromosome 2 using individual BAC probes containing these single-copy sequences. The physical order of the markers coincided with that established by genetic analysis. The two AFLP markers most-closely linked to the Cnr locus were located in the euchromatic region 2.7-cM apart. The physical distance between these markers was measured on the pachytene spreads and estimated to be approximately 900 kb, suggesting a bp:cM relationship in this region of chromosome 2 of about 330 kb/cM. This is less than half the average value of 750 kb/cM for the tomato genome. The relationship between genetic and physical distances on chromosome 2 is discussed.

18.
J Cell Sci ; 114(Pt 23): 4207-17, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11739653

ABSTRACT

The intranuclear arrangements of centromeres and telomeres during meiotic interphase and early prophase I of meiosis in Arabidopsis thaliana were analysed by fluorescent in situ hybridisation to spread pollen mother cells and embryo-sac mother cells. Meiocyte identification, staging and progression were established by spreading and sectioning techniques, including various staining procedures and bromodeoxyuridine labeling of replicating DNA. Centromere regions of Arabidopsis are unpaired, widely dispersed and peripherally located in nuclei during meiotic interphase, and they remain unpaired and unassociated throughout leptotene. Eventually they associate pairwise during zygotene, as part of the nucleus-wide synapsis of homologous chromosomes. Telomeres, by contrast, show a persistent association with the nucleolus throughout meiotic interphase. Variation in telomere signal number indicates that telomeres undergo pairing during this interval, preceding the onset of general chromosome synapsis. During leptotene the paired telomeres lose their association with the nucleolus and become widely dispersed. As the chromosomes synapse during zygotene, the telomeres reveal a loose clustering within one hemisphere, which may represent a degenerate or relic bouquet configuration. We propose that in Arabidopsis the classical leptotene/zygotene bouquet is absent and is replaced functionally by nucleolus-associated telomere clustering.


Subject(s)
Arabidopsis Proteins , Cell Nucleolus/physiology , Chromosome Pairing/physiology , Meiosis/physiology , Telomere/physiology , Arabidopsis , Centromere , Chromosomes , DNA-Binding Proteins/genetics , In Situ Hybridization, Fluorescence/methods , Plant Proteins/genetics , Pollen
19.
Hum Mol Genet ; 10(11): 1155-62, 2001 May 15.
Article in English | MEDLINE | ID: mdl-11371508

ABSTRACT

We showed recently that mutation of the hMRE11 gene identified a new ataxia telangiectasia-like disorder (ATLD). In this report we describe the genomic organization of the hMRE11 gene and the analysis of a promoter region that appears to direct the divergent transcription of hMRE11 and the adjacent gene. The characterization of the genomic organization of the hMRE11 gene allowed us to determine the basis of an apparent null hMRE11 allele present in the mother and two patients in one of our two ATLD families. Polymorphic markers in the hMRE11 gene, including the promoter region, provided evidence that the mutated maternal allele was not deleted. An exon by exon search revealed the presence of a missense mutation in exon 15, the effect of which was to create a premature termination codon. Transcripts derived from the mutant allele were found to be subject to nonsense-mediated mRNA decay (NMD). Therefore, this allele was effectively null, because little if any mRNA from it was available for translation. The ATLD patients carrying this protein-truncating hMRE11 mutation have survived because the null allele they inherited from their mother is present with a missense mutation inherited from their father, which is expressed as normal levels of partially functional MRE11 protein. The mutation in the maternal hMRE11 allele of family 2 was also identified in a further unrelated Italian family with ATLD and also found to be subject to NMD.


Subject(s)
Ataxia Telangiectasia/genetics , DNA-Binding Proteins/genetics , Genome , Mutation , Promoter Regions, Genetic , RNA, Messenger/genetics , Alleles , Ataxia Telangiectasia/metabolism , Base Sequence , Cell Line , DNA Mutational Analysis , DNA-Binding Proteins/metabolism , Exons , Genetic Vectors , Humans , MRE11 Homologue Protein , Molecular Sequence Data , Protein Biosynthesis , Pseudogenes
20.
Chromosome Res ; 9(2): 121-8, 2001.
Article in English | MEDLINE | ID: mdl-11321367

ABSTRACT

Meiotic chiasmata were analysed in metaphase I pollen mother cells (PMCs) of wild-type Arabidopsis thaliana and in two meiotic mutants. Fluorescence in situ hybridisation (FISH) with 45S rDNA and 5S rDNA as probes was used to identify the five chromosome pairs. A wild-type chiasma frequency of 9.24 per cell was found, consistent with estimated genetic recombination values. Individual bivalent chiasma frequencies varied according to chromosome size; chromosome 1 had the highest mean chiasma frequency (2.14) while the short acrocentric chromosomes had the lowest frequencies (1.54 and 1.56). FISH analysis was extended to two meiotic mutants (asy1 and dsy1) having low residual bivalent and chiasma frequencies. Mutant dsy1 gave no indication of chromosome preference for residual bivalent formation; instead it showed a general reduction in bivalent and chiasma frequencies. In asy1, the longest chromosome (1) had the lowest bivalent frequency and chiasma frequency while the short acrocentric chromosome 2 had the highest frequencies. This chromosome pair may be preferentially involved in synapsis and chiasma formation because of their association with the nucleolus. However, other factors may be operating since the other acrocentric chromosome (4), with similar size and structure to chromosome 2, did not share these chiasma properties.


Subject(s)
Arabidopsis/genetics , Chromosomes/ultrastructure , DNA, Ribosomal/genetics , Mutation , Recombination, Genetic , Cell Nucleolus/ultrastructure , In Situ Hybridization, Fluorescence , Meiosis
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