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1.
Nat Commun ; 15(1): 4885, 2024 Jun 07.
Article in English | MEDLINE | ID: mdl-38849353

ABSTRACT

Inherited cardiomyopathies are common cardiac diseases worldwide, leading in the late stage to heart failure and death. The most promising treatments against these diseases are small molecules directly modulating the force produced by ß-cardiac myosin, the molecular motor driving heart contraction. Omecamtiv mecarbil and Mavacamten are two such molecules that completed phase 3 clinical trials, and the inhibitor Mavacamten is now approved by the FDA. In contrast to Mavacamten, Omecamtiv mecarbil acts as an activator of cardiac contractility. Here, we reveal by X-ray crystallography that both drugs target the same pocket and stabilize a pre-stroke structural state, with only few local differences. All-atom molecular dynamics simulations reveal how these molecules produce distinct effects in motor allostery thus impacting force production in opposite way. Altogether, our results provide the framework for rational drug development for the purpose of personalized medicine.


Subject(s)
Molecular Dynamics Simulation , Myocardial Contraction , Urea , Myocardial Contraction/drug effects , Crystallography, X-Ray , Humans , Urea/analogs & derivatives , Urea/pharmacology , Urea/chemistry , Cardiac Myosins/metabolism , Cardiac Myosins/chemistry , Cardiac Myosins/genetics , Ventricular Myosins/metabolism , Ventricular Myosins/chemistry , Ventricular Myosins/genetics , Animals , Benzylamines , Uracil/analogs & derivatives
2.
bioRxiv ; 2023 Nov 15.
Article in English | MEDLINE | ID: mdl-38014327

ABSTRACT

Inherited cardiomyopathies are amongst the most common cardiac diseases worldwide, leading in the late-stage to heart failure and death. The most promising treatments against these diseases are small-molecules directly modulating the force produced by ß-cardiac myosin, the molecular motor driving heart contraction. Two of these molecules that produce antagonistic effects on cardiac contractility have completed clinical phase 3 trials: the activator Omecamtiv mecarbil and the inhibitor Mavacamten. In this work, we reveal by X-ray crystallography that both drugs target the same pocket and stabilize a pre-stroke structural state, with only few local differences. All atoms molecular dynamics simulations reveal how these molecules can have antagonistic impact on the allostery of the motor by comparing ß-cardiac myosin in the apo form or bound to Omecamtiv mecarbil or Mavacamten. Altogether, our results provide the framework for rational drug development for the purpose of personalized medicine.

3.
Theriogenology ; 158: 283-289, 2020 Dec.
Article in English | MEDLINE | ID: mdl-33002772

ABSTRACT

Both maternal and fetal genotypes contribute to conceptus development. The objective was to determine how placentome number, size, and type and fetal weight was influenced after reciprocal embryo transfer in Columbia and Romanov sheep. Reciprocal embryo transfer was conducted between Columbia and Romanov ewes where a single embryo was transferred into Romanov and Columbia recipients [Romanov embryo in a Romanov uterus (RinR, n = 9); Romanov embryo in a Columbia uterus (RinC, n = 7); Columbia embryo in a Columbia uterus (CinC, n = 8); Columbia embryo in a Romanov uterus (CinR, n = 4)]. On day 130 of gestation, fetuses were weighed and placentomes were morphologically typed, weighed, and measured. Regardless of maternal genotype, Romanov fetuses were smaller (P < 0.05) compared to Columbia fetuses. Moreover, CinC fetuses were larger (P < 0.05) than CinR fetuses. There was a tendency (P = 0.12) for a fetal by maternal genotype interaction on total placentome weight, but main effects were significant for fetal genotype (P = 0.04) and maternal genotype (P < 0.01). The number of Type A placentomes was greater than any other types. Type A placentomes had a greater (P < 0.05) contribution to total placentome weight within the Romanov uterus, or when associated with a Romanov fetus, than within the Columbia breed, in which placentome type was evenly distributed. The hypothesis that the Romanov uterus would limit the growth of a Columbia conceptus is accepted; however, the Romanov conceptus did not experience augmented growth when transferred into a Columbia uterus as predicted.


Subject(s)
Fetal Weight , Placenta , Animals , Embryo Transfer/veterinary , Female , Fetus , Genotype , Pregnancy , Sheep
4.
Chemistry ; 24(2): 458-470, 2018 Jan 09.
Article in English | MEDLINE | ID: mdl-29024097

ABSTRACT

We describe the synthesis of 1,1'- and 2,2'-bicarbazoles by oxidative homocoupling of 2- and 1-hydroxycarbazoles. The oxidative coupling using catalytic amounts of F16 PcFe can be applied to both groups of substrates. Although F16 PcFe generally provides the best yields for the synthesis of 1,1'-bicarbazoles, di-tert-butyl peroxide affords better results for the 2,2'-bicarbazoles. In our study, we have achieved the first syntheses of the biscarbalexines A-C, bisglybomine B, 2,2'-dihydroxy-7,7'-dimethoxy-3,3'-dimethyl-1,1'-bicarbazole, bispyrayafoline C, and bisisomahanine. The iron-catalyzed coupling of koenigine led to an improved synthesis of 8,8''-biskoenigine and afforded an unprecedented decacylic product. Oxidative coupling of 1-hydroxycarbazoles led to bisclausenol, and to the first total syntheses of bismurrayafoline B and D.

5.
Chemistry ; 22(47): 16897-16911, 2016 Nov 14.
Article in English | MEDLINE | ID: mdl-27778384

ABSTRACT

We describe a regioselective synthesis of 4- or 5-substituted carbazoles by oxidative cyclisation of meta-oxygen-substituted N-phenylanilines. Using the regiodirecting effect of a pivaloyloxy group, we prepared 4-hydroxycarbazole, a precursor for the enantiospecific synthesis of the ß-adrenoreceptor antagonists (-)-(S)-carazolol (5) and (-)-(S)-carvedilol (6). Regioselective palladium(II)-catalysed cyclisation of different diarylamines led to total synthesis of glycoborine (7) and the first total syntheses of the phytoalexin carbalexin A (8), glybomine A (9) and glybomine B (10). For glybomine B (10), a 5-hydroxycarbazole was converted into the corresponding triflate and utilized for introduction of a prenyl substituent.


Subject(s)
Carbazoles/chemical synthesis , Chemistry, Pharmaceutical/methods , Carvedilol , Catalysis , Cyclization , Models, Chemical , Oxidation-Reduction , Palladium/chemistry , Propanolamines/chemical synthesis , Sesquiterpenes/chemical synthesis , Spectrometry, Mass, Electrospray Ionization , Phytoalexins
6.
Nat Prod Res ; 30(14): 1661-4, 2016 Jul.
Article in English | MEDLINE | ID: mdl-26795069

ABSTRACT

We report the first investigation of the chemical constituents of Zygophyllum melongena Bunge, a species growing in Mongolia. The quinovic acid glycosides 3-O-(ß-D-glucopyranosyl)quinovic acid and 3-O-(ß-D-glucopyranosyl)quinovic acid (28→1)-(ß-D-glucopyranosyl) ester were identified in the chloroform fraction along with the flavonoid glycoside astragalin. The n-butanol fraction contained (+)-D-pinitol as the major component, a cyclitol with anti-diabetic properties. The structures of the isolated natural products were confirmed using ESI-MS and NMR spectroscopy ((1)H, (13)C, COSY, HSQC, HMBC, NOESY and ROESY). This is the first report of the isolation of (+)-D-pinitol from the genus Zygophyllum.


Subject(s)
Zygophyllum/chemistry , 1-Butanol , Chloroform , Glycosides/chemistry , Magnetic Resonance Spectroscopy , Mongolia , Plant Extracts/chemistry , Solvents , Spectrometry, Mass, Electrospray Ionization
7.
Chemistry ; 22(7): 2487-500, 2016 Feb 12.
Article in English | MEDLINE | ID: mdl-26787133

ABSTRACT

We describe the total synthesis of methylene-bridged biscarbazole alkaloids by using a late-stage Ullmann-type coupling of fully functionalised carbazole subunits. The carbazole derivatives were synthesised via a sequence of palladium(0)- and palladium(II)-catalysed coupling reactions. Our approach has provided bismurrayafoline-A, bismurrayafolinol, chrestifolines B-D, and the first total synthesis of murrastifoline-C and murrafoline-E.


Subject(s)
Alkaloids/chemical synthesis , Carbazoles/chemistry , Heterocyclic Compounds, 4 or More Rings/chemical synthesis , Palladium/chemistry , Alkaloids/chemistry , Carbazoles/chemical synthesis , Catalysis , Heterocyclic Compounds, 4 or More Rings/chemistry , Molecular Structure , Stereoisomerism
8.
J Org Chem ; 80(11): 5666-73, 2015 Jun 05.
Article in English | MEDLINE | ID: mdl-25915067

ABSTRACT

We describe efficient synthetic routes to murrayamine A (mukoenine C), O-methylmurrayamine A, mahanine, O-methylmahanine, and murrayamine D and the first total syntheses of murrayamine E, I, and K. Key steps are a palladium-catalyzed construction of the carbazole framework and an annulation of the pyran ring, which is either catalyzed by phenylboronic acid or promoted by a Lewis acid.


Subject(s)
Alkaloids/chemistry , Carbazoles/chemistry , Carbazoles/chemical synthesis , Lewis Acids/chemistry , Catalysis , Molecular Structure , Stereoisomerism
9.
Org Biomol Chem ; 12(33): 6490-9, 2014 Sep 07.
Article in English | MEDLINE | ID: mdl-25023897

ABSTRACT

The synthesis of seven pyrano[3,2-a]carbazole alkaloids has been achieved using their putative biogenetic precursor 2-hydroxy-6-methylcarbazole as key intermediate.


Subject(s)
Alkaloids/chemical synthesis , Carbazoles/chemistry , Alkaloids/chemistry , Carbazoles/chemical synthesis , Molecular Structure
10.
Chemistry ; 20(31): 9504-9, 2014 Jul 28.
Article in English | MEDLINE | ID: mdl-25042058

ABSTRACT

The DIBAL-H promoted reductive pyran ring opening of dialkylpyrano[3,2-a]carbazoles provides a direct access to a broad range of prenyl- and geranyl-substituted carbazoles. Formation of a pyran ring followed by reductive ring opening represents a new method for the introduction of prenyl and geranyl groups. In the course of the present work, we achieved the first total syntheses of the following eight carbazole alkaloids: clauraila-E, 7-hydroxyheptaphylline, 7-methoxyheptaphylline, mukoenine-B (clausenatine-A), mukoenine-A (girinimbilol), mahanimbinol (mahanimbilol), euchrestine-A, and isomurrayafoline-B.


Subject(s)
Alkaloids/chemical synthesis , Carbazoles/chemical synthesis , Organometallic Compounds/chemistry , Alkaloids/chemistry , Carbazoles/chemistry , Crystallography, X-Ray , Molecular Structure , Prenylation , Pyrans/chemistry , Reducing Agents/chemistry , Stereoisomerism
11.
Chemistry ; 20(28): 8536-40, 2014 Jul 07.
Article in English | MEDLINE | ID: mdl-24889600

ABSTRACT

The boronic acid-catalyzed annulation of citral opens up a short route to oxygenated cyclized monoterpenoid pyranocarbazole alkaloids. Thus, murrayamine-D is available in only three steps and 55% overall yield from the corresponding carbazole precursor.


Subject(s)
Alkaloids/chemical synthesis , Boronic Acids/chemistry , Carbazoles/chemistry , Carbazoles/chemical synthesis , Catalysis , Cyclization , Molecular Structure , Pyrans , Stereoisomerism
12.
Org Biomol Chem ; 12(23): 3831-5, 2014 Jun 21.
Article in English | MEDLINE | ID: mdl-24806196

ABSTRACT

We describe an efficient synthesis of the methylene-bridged biscarbazole alkaloids bismurrayafoline-A, bismurrayafolinol and chrestifoline B-D using an Ullmann-type coupling at the benzylic position.


Subject(s)
Alkaloids/chemistry , Carbazoles/chemical synthesis , Chemistry, Organic/methods , Alkaloids/chemical synthesis , Carbazoles/chemistry , Nitrobenzoates/chemistry
13.
Org Biomol Chem ; 12(23): 3866-76, 2014 Jun 21.
Article in English | MEDLINE | ID: mdl-24788002

ABSTRACT

Seven naturally occurring pyranocarbazole alkaloids (pyrayafoline A-E, O-methylmurrayamine A and O-methylmahanine) have been obtained by total synthesis using a palladium(II)-catalysed oxidative cyclisation of a diarylamine to an orthogonally diprotected 2,7-dihydroxycarbazole as key step.


Subject(s)
Alkaloids/chemical synthesis , Carbazoles/chemical synthesis , Chemistry, Organic/methods , Palladium/chemistry , Pyrans/chemical synthesis , Alkaloids/chemistry , Carbazoles/chemistry , Catalysis , Molecular Conformation , Pyrans/chemistry
14.
Org Biomol Chem ; 12(6): 872-5, 2014 Feb 14.
Article in English | MEDLINE | ID: mdl-24336906

ABSTRACT

We describe the regioselective prenylation of 3-bromocarbazole by palladium(0)-catalysed cross coupling with a prenylstannane or a prenylboronate. The procedure is applied to the synthesis of precursors for biologically active carbazole alkaloids.


Subject(s)
Carbazoles/chemistry , Organometallic Compounds/chemistry , Palladium/chemistry , Carbazoles/chemical synthesis , Catalysis , Molecular Structure , Stereoisomerism
15.
Bioorg Med Chem Lett ; 23(22): 6111-3, 2013 Nov 15.
Article in English | MEDLINE | ID: mdl-24084159

ABSTRACT

A variety of cholestan-3ß-ol derivatives, which are oxygenated at different positions of the steroid ring system, were prepared and tested for their inhibition of the Mycobacterium tuberculosis H37Rv strain. Several compounds showed significant antitubercular activities with MIC90 values in the range 4-8 µM and low or non-detectable toxicity against mammalian cells.


Subject(s)
Antitubercular Agents/pharmacology , Cholestanols/pharmacology , Mycobacterium tuberculosis/drug effects , Cholestanols/chemical synthesis , Cholestanols/chemistry , Humans , Microbial Sensitivity Tests , Mycobacterium tuberculosis/growth & development , Oxidation-Reduction , Stereoisomerism , Structure-Activity Relationship
16.
Chemistry ; 19(42): 14098-111, 2013 Oct 11.
Article in English | MEDLINE | ID: mdl-24030919

ABSTRACT

We have developed a highly efficient route to 2-hydroxy-3-methylcarbazole (1) via a palladium-catalyzed construction of the carbazole skeleton. Using 1 as relay compound, different methods for annulations of pyran rings by reaction with terpenoid building blocks have been tested. The Lewis acid promoted reaction of 1 with prenal (21) opened up an efficient route to girinimbine (3) and the corresponding reaction with citral (25) afforded mahanimbine (5). Oxidation of compounds 3 and 5 provided murrayacine (4) and murrayacinine (6). Following the biogenetic proposal, mahanimbine (5) has been exploited for efficient biomimetic syntheses of the cyclized monoterpenoid pyrano[3,2-a]carbazole alkaloids cyclomahanimbine (7), mahanimbidine (8) and bicyclomahanimbine (9). The interconversions of 5, 7, 8 and 9 are described and mechanistic implications are discussed. Structural assignments are unambiguously verified by X-ray crystal structure determinations. Moreover, cyclomahanimbine (7) was transformed into murrayazolinine (10) and exozoline (11).


Subject(s)
Carbazoles/chemistry , Carbazoles/chemical synthesis , Lewis Acids/chemistry , Monoterpenes/chemical synthesis , Pyrans/chemical synthesis , Biomimetics , Crystallography, X-Ray , Cyclization , Molecular Structure , Monoterpenes/chemistry , Oxidation-Reduction , Palladium/chemistry , Pyrans/chemistry
17.
Bioorg Med Chem ; 21(18): 5794-8, 2013 Sep 15.
Article in English | MEDLINE | ID: mdl-23910990

ABSTRACT

Using 3ß-hydroxychol-5-en-24-oic acid (4) as starting material, the diastereoisomeric allylic alcohols (24E)-26-hydroxydesmosterol (2) and (24Z)-26-hydroxydesmosterol (3) have been synthesised in six steps with 67% and 12% overall yield, respectively. Both of these isomers are found in newborn mouse brain where sterol synthesis is high. Unlike desmosterol (1), neither of these isomers is a ligand to the liver x receptors and thus represents a novel biological deactivation mechanism avoiding cholesterol synthesis.


Subject(s)
Desmosterol/analogs & derivatives , Desmosterol/chemistry , Animals , Brain/metabolism , Crystallography, X-Ray , Desmosterol/chemical synthesis , Isomerism , Liver X Receptors , Mice , Molecular Conformation , Orphan Nuclear Receptors/chemistry , Orphan Nuclear Receptors/metabolism
19.
Org Biomol Chem ; 10(21): 4159-63, 2012 Jun 07.
Article in English | MEDLINE | ID: mdl-22434373

ABSTRACT

A stereoselective synthesis of (25S)-Δ(1)-, (25S)-Δ(1,4)-, (25S)-Δ(1,7)-, (25S)-Δ(8(14))-, (25S)-Δ(4,6,8(14))-dafachronic acid, methyl (25S)-Δ(1,4)-dafachronate and (25S)-5α-hydroxy-3,6-dioxocholest-7-en-26-oic acid is described. (25S)-Δ(1,4)-Dafachronic acid and its methyl ester are natural products isolated from corals and have been obtained by synthesis for the first time. (25S)-5α-Hydroxy-3,6-dioxocholest-7-en-26-oic acid represents a promising synthetic precursor for cytotoxic marine steroids.


Subject(s)
Anthozoa/chemistry , Caenorhabditis elegans/drug effects , Cholestenes/chemical synthesis , Animals , Caenorhabditis elegans/genetics , Caenorhabditis elegans/growth & development , Caenorhabditis elegans Proteins/genetics , Cholestenes/pharmacology , Dose-Response Relationship, Drug , Esters/chemical synthesis , Esters/pharmacology , Larva/drug effects , Larva/genetics , Larva/growth & development , Molecular Structure , Receptors, Cytoplasmic and Nuclear/deficiency , Receptors, Cytoplasmic and Nuclear/genetics , Stereoisomerism , Structure-Activity Relationship
20.
Org Biomol Chem ; 8(20): 4562-8, 2010 Oct 21.
Article in English | MEDLINE | ID: mdl-20664880

ABSTRACT

We describe an efficient total synthesis of the sesquiterpenes (±)-ß-isocomene and (±)-isocomene using a Lewis acid-promoted [3 + 2] cycloaddition of allyl-tert-butyldiphenylsilane as the key-step.

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