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1.
J Chem Phys ; 157(21): 214303, 2022 Dec 07.
Article in English | MEDLINE | ID: mdl-36511526

ABSTRACT

In this work, the pressure- and temperature-dependent reaction rate constants for the hydrogen abstraction and addition of hydroxyl radicals to the unsaturated cyclopentene were studied. Geometries and vibrational frequencies of reactants, products, and transition states were calculated using density functional theory, with single-point energy corrections determined at the domain-based local pair natural orbital-coupled-cluster single double triple/cc-pVTZ-F12 level. The high-pressure limit rate constants were calculated using the canonical variational transition state theory with the small-curvature tunneling approximation. The vibrational partition functions were corrected by the effects of torsional and ring-puckering anharmonicities of the transition states and cyclopentene, respectively. Variational effects are shown to be relevant for all the hydrogen abstraction reactions. The increasing of the rate constants by tunneling is significant at temperatures below 500 K. The pressure dependence on the rate constants of the addition of OH• to cyclopentene was calculated using the system-specific quantum Rice-Ramsperger-Kassel model. The high-pressure limit rate constants decrease with increasing temperature in the range 250-1000 K. The falloff behavior was studied at several temperatures with pressures varying between 10-3 and 103 bar. At temperatures below 500 K, the effect of the pressure on the addition rate constant is very modest. However, at temperatures around and above 1000 K, taking pressure into account is mandatory for an accurate rate constant calculation. Branching ratio analyses reveal that the addition reaction dominates at temperatures below 500 K, decreasing rapidly at higher temperatures. Arrhenius parameters are provided for all reactions and pressure dependent Arrhenius parameters are given for the addition of OH• to cyclopentene.

2.
Neuroscience ; 167(1): 135-42, 2010 Apr 28.
Article in English | MEDLINE | ID: mdl-20138128

ABSTRACT

Fusion of synaptic vesicles with the plasma membrane is mediated by the SNARE (soluble NSF attachment receptor) proteins and is regulated by synaptotagmin (syt). There are at least 17 syt isoforms that have the potential to act as modulators of membrane fusion events. Synaptotagmin IV (syt IV) is particularly interesting; it is an immediate early gene that is regulated by seizures and certain classes of drugs, and, in humans, syt IV maps to a region of chromosome 18 associated with schizophrenia and bipolar disease. Syt IV has recently been found to localize to dense core vesicles in hippocampal neurons, where it regulates neurotrophin release. Here we have examined the ultrastructure of cultured hippocampal neurons from wild-type and syt IV -/- mice using electron tomography. Perhaps surprisingly, we observed a potential synaptic vesicle transport defect in syt IV -/- neurons, with the accumulation of large numbers of small clear vesicles (putative axonal transport vesicles) near the trans-Golgi network. We also found an interaction between syt IV and KIF1A, a kinesin known to be involved in vesicle trafficking to the synapse. Finally, we found that syt IV -/- synapses exhibited reduced numbers of synaptic vesicles and a twofold reduction in the proportion of docked vesicles compared to wild-type. The proportion of docked vesicles in syt IV -/- boutons was further reduced, 5-fold, following depolarization.


Subject(s)
Golgi Apparatus/physiology , Hippocampus/physiology , Neurons/physiology , Synaptic Vesicles/physiology , Synaptotagmins/metabolism , Animals , Animals, Newborn , Brain/physiology , Brain/ultrastructure , Cells, Cultured , Electron Microscope Tomography , Golgi Apparatus/ultrastructure , Hippocampus/ultrastructure , Immunoprecipitation , Kinesins/metabolism , Mice , Mice, Knockout , Microscopy, Confocal , Microscopy, Fluorescence , Neurons/ultrastructure , Presynaptic Terminals/physiology , Presynaptic Terminals/ultrastructure , Synaptic Vesicles/ultrastructure , Synaptotagmins/deficiency , Synaptotagmins/genetics
3.
Am Heart J ; 147(4): 698-704, 2004 Apr.
Article in English | MEDLINE | ID: mdl-15077087

ABSTRACT

BACKGROUND: Clinical descriptors and ST-segment recovery variables hold prognostic information for clinical outcome after thrombolysis for acute myocardial infarction (MI). We sought to define the incremental prognostic value of continuous 12-lead ST-segment monitoring variables to clinical risk descriptors identified by the Global Utilization of Streptokinase and TPA (alteplase) for Occluded Coronary Arteries (GUSTO-I) trial 30-day mortality analysis. METHODS: Of 1,777 patients enrolled in continuous ST-segment substudies from the Thrombolysis and Angioplasty in Myocardial Infarction (TAMI-9), GUSTO-I, Duke University Clinical Cardiology Study (DUCCS-II), Integrilin to manage Platelet Aggregation to Combat Thrombus in Acute Myocardial Infarction (IMPACT-AMI), Promotion of Reperfusion by Inhibition of Thrombin During Myocardial Infarction Evolution (PRIME), and Platelet Aggregation Receptor Antagonist Dose Investigation and Reperfusion Gain in Myocardial Infarction (PARADIGM) trials, 825 patients qualified for assessment of time to recovery. ST recovery variables analyzed were time to stable ST-recovery and late ST elevation. Patients who were at low clinical risk (n = 261) had no high-risk descriptors, and patients at high clinical risk (n = 564) had at least 1 of these high-risk descriptors: age >or=70 years, systolic blood pressure or=90 beats/min, anterior MI, or previous MI. High (n = 90), moderate (n = 318), and low (n =417) ST-risk groups were defined by the presence of both slow ST recovery and late ST elevation, one or the other, or neither, respectively. End points analyzed were inhospital death and combined death, reinfarction, or congestive heart failure. RESULTS: There was a trend toward increased mortality rate in the high-clinical/high-ST-risk group. For the composite end point, ST subgrouping resulted in significant event stratification in both patients at low and high clinical risk. In multivariable analysis, age and heart rate were independent predictors of both mortality and the composite end point. Late ST elevation added incremental prognostic information. CONCLUSION: Age, heart rate, and late ST elevation are powerful, independent predictors of adverse clinical outcome. Continuous monitoring allows noninvasive assessment of the response to therapy. Consequently, this technique will enhance the potential to risk-stratify individual patients in a real-time setting.


Subject(s)
Electrocardiography, Ambulatory , Myocardial Infarction/diagnosis , Aged , Blood Pressure , Female , Heart Failure , Heart Rate , Humans , Logistic Models , Male , Middle Aged , Myocardial Infarction/mortality , Myocardial Infarction/physiopathology , Myocardial Infarction/therapy , Prognosis , Recurrence , Risk
4.
Genetics ; 144(3): 1181-94, 1996 Nov.
Article in English | MEDLINE | ID: mdl-8913759

ABSTRACT

Is there a selective advantage of increased diversity at one immunoglobulin locus when diversity at another locus is low? A previous paper demonstrated excess heterozygosity at the rabbit light chain b locus when heterozygosity was low at the heavy chain constant region e locus. Here we consider the reverse situation by analyzing allele distributions at heavy chain loci in populations fixed for the light chain b locus. We analyzed the a locus that encodes the predominantly expressed heavy chain variable region, and the d and e loci that control different parts of the Ig gamma class constant region. While there was excess heterozygosity, genetic differentiation between localities was extensive and was most pronounced for females. This was in marked contrast with observations in areas where b-locus diversity was important and confirms a negative correlation between e- and b-locus heterozygosity. Trigenic disequilibria corresponded to a significant negative correlation between e- and a-locus heterozygosity due mainly to strong variation among localities within the context of pronounced (digenic) linkage disequilibria. Although substantial, the average increase in a/e-locus single heterozygosity implemented by higher order disequilibria within localities was not significant.


Subject(s)
Alleles , Genetic Variation , Immunoglobulins/genetics , Analysis of Variance , Animals , Genotype , Linkage Disequilibrium , Rabbits
5.
Bull Soc Pathol Exot ; 83(4): 446-56; discussion 456-7, 1990.
Article in French | MEDLINE | ID: mdl-2285998

ABSTRACT

Sera from 269 wild rabbit (Oryctolagus cuniculus L.) trapped in 1985 and 1986 in Camargue and Vaucluse, France, were studied for antibody against 9 arboviruses. By inhibition haemagglutination test, positive reactions were found only against West-Nile (0.37%). By complement fixation test, antibodies were detected against Eyach (0.92%) and Tribec (0.46%). These results are discussed according to arboviruses isolated in France, to previous serosurveys in rabbits and other mammals and to potential vectors known to occur in France. Potential impact on rabbit population is also discussed.


Subject(s)
Antibodies, Viral/blood , Arbovirus Infections/veterinary , Arboviruses/immunology , Rabbits , Animals , Arbovirus Infections/epidemiology , Complement Fixation Tests/veterinary , Disease Vectors , Female , France/epidemiology , Hemagglutination Tests/veterinary , Male , Prevalence
6.
7.
Proc Natl Acad Sci U S A ; 84(9): 3075-9, 1987 May.
Article in English | MEDLINE | ID: mdl-3106983

ABSTRACT

Consistent linkage disequilibrium was observed between independently segregating protein loci. In natural populations of the European rabbit Oryctolagus cuniculus, highly significant, nonrandom associations between alleles of the constant regions of the immunoglobulin light and heavy chains were found, both within localities and between localities. We suggest that the population genetic data presented here are relevant to the adaptive significance of the genetic polymorphisms of the antibody constant regions.


Subject(s)
Alleles , Genetic Linkage , Immunoglobulin Constant Regions/genetics , Immunoglobulins/genetics , Polymorphism, Genetic , Animals , Australia , Europe , Genetics, Population , Immunoglobulin Allotypes/genetics , Immunoglobulin Heavy Chains/genetics , Immunoglobulin Light Chains/genetics , Rabbits , United Kingdom
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