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1.
J Clin Microbiol ; 39(4): 1549-52, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11283085

ABSTRACT

We characterized 22 human clinical strains of Streptococcus bovis by genotypic (16S rRNA gene sequence analysis [MicroSeq]; Applied Biosystems, Foster City, Calif.) and phenotypic (API 20 Strep and Rapid ID32 Strep systems (bioMerieux Vitek, Hazelton, Mo.) methods. The strains, isolated from blood, cerebrospinal fluid (CSF), and urine, formed two distinct 16S ribosomal DNA sequence clusters. Three strains which were associated with endocarditis urinary tract infection (UTI), and sepsis clustered with the S. bovis type strain ATCC 33317 (cluster 1); other closely related type strains were S. equinus and S. infantarius. Nineteen strains clustered at a distance of about 2.5% dissimilarity to the S. bovis type strain (cluster 2) and were associated with central nervous system (CNS) disease in addition to endocarditis, UTI, and sepsis. All strains were distinct from S. gallolyticus. Within cluster 2, a single strain grouped with ATCC strain 43143 (cluster 2a) and may be phenotypically distinct. All the other strains formed a second subgroup (cluster 2b) that was biochemically similar to S. bovis biotype II/2 (mannitol negative and beta galactosidase, alpha galactosidase, beta glucuronidase, and trehalose positive). The API 20 Strep system identified isolates of cluster 2b as S. bovis biotype II/2, those of cluster 1 as S. bovis biotype II/1, and that of cluster 2a as S. bovis biotype I. There was an excellent correlation of biotype and genotype: S. bovis biotype II/2 isolates form a separate genospecies distinct from the S. bovis, S. gallolyticus, and S. infantarius type strains and are the most common isolates in adult males.


Subject(s)
Bacterial Typing Techniques , Genes, rRNA , RNA, Ribosomal, 16S/genetics , Streptococcal Infections/microbiology , Streptococcus bovis/classification , Adult , Child , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Genotype , Humans , Male , Molecular Sequence Data , Phenotype , Sequence Analysis, DNA , Streptococcus bovis/genetics , Streptococcus bovis/isolation & purification
2.
Clin Infect Dis ; 32(10): 1511-5, 2001 May 15.
Article in English | MEDLINE | ID: mdl-11317256

ABSTRACT

Difficulties in distinguishing organisms of the "Streptococcus milleri group" (SMG; Streptococcus intermedius, Streptococcus constellatus, and Streptococcus anginosus), have caused ambiguity in determining their pathogenic potential. We reviewed 118 cases in which SMG isolates had been identified using 16S rDNA sequence. S. constellatus and S. anginosus were isolated far more frequently than was S. intermedius. Nearly all isolates of S. intermedius and most isolates of S. constellatus, but only 19% of those of S. anginosus, were associated with abscess. Our findings suggest that speciation of the SMG may guide diagnostic evaluation, give insight into the possible role of coinfecting organisms, and help assess the need to search for occult abscess.


Subject(s)
Abscess , RNA, Ribosomal, 16S/genetics , Streptococcal Infections/microbiology , Streptococcus/classification , Streptococcus/pathogenicity , Genes, rRNA , Humans , Sequence Analysis, DNA , Streptococcus/genetics
3.
J Clin Microbiol ; 38(4): 1703-5, 2000 Apr.
Article in English | MEDLINE | ID: mdl-10747177

ABSTRACT

Aerococcus urinae is a rarely reported pathogen, possibly due to difficulties in the identification of the organism. A. urinae is a gram-positive coccus that grows in pairs and clusters, produces alpha-hemolysis on blood agar, and is negative for catalase and pyrrolidonyl aminopeptidase. Some of these characteristics and its being absent from the databases of most commercial identification systems could allow A. urinae to be misidentified as a streptococcus, enterococcus, or staphylococcus. We report two cases of urinary tract infection (UTI) caused by A. urinae and characterize these isolates by morphology, biochemical testing, whole-cell fatty acid analysis, 16S rRNA gene sequencing, and antibiotic susceptibilities. Most patients infected with A. urinae are elderly males with predisposing conditions who present initially with UTI. Because A. urinae is resistant to sulfonamides, treatment could be inappropriate, with infections resulting in serious complications, including death. It is important for the clinician and the microbiologist to consider A. urinae a potential pathogen and proceed with thorough microbiological identification.


Subject(s)
Gram-Positive Bacterial Infections/microbiology , Streptococcaceae/classification , Streptococcaceae/isolation & purification , Urinary Tract Infections/microbiology , Aged , Aged, 80 and over , Bacterial Typing Techniques , Humans , Male , Microbial Sensitivity Tests , Middle Aged , Streptococcaceae/genetics
4.
J Clin Microbiol ; 38(4): 1426-9, 2000 Apr.
Article in English | MEDLINE | ID: mdl-10747119

ABSTRACT

Mycobacterium tuberculosis often exhibits serpentine cording when grown in liquid medium, whereas Mycobacterium kansasii can be larger and cross-barred. We assessed the use of these morphologic characteristics as a cost-effective method for rapid presumptive identification of isolates from BACTEC bottles. Without specific training, using the Kinyoun acid-fast stain, definitive cording was found in 237 of 373 specimens positive for M. tuberculosis (64%) and cross-barring was recognized within 63 of 76 (83%) of the specimens positive for M. kansasii, giving sensitivities specificities, positive predictive values, and negative predictive values of 63.5, 96, 92, and 79%, respectively, for M. tuberculosis and 83, 95, 59, and 98%, respectively, for M. kansasii. With training and experience, these results improved to 74.5, 98, 96, and 84% and 93, 98, 79, and 98%, respectively. The major improvements were in distinguishing the pseudocording, or loose aggregation of Mycobacterium avium complex from M. tuberculosis and the long beaded forms of Mycobacterium gordonae from M. kansasii. Mycobacterium asiaticum and Mycobacterium szulgai, which rarely occur, are genetically related to M. kansasii and morphologically difficult to distinguish. In defined circumstances, serpentine cording and cross-barring can be used for rapid presumptive identification of M. tuberculosis and M. kansasii, respectively, and as guides for initial probe selection to reduce costs.


Subject(s)
Mycobacterium Infections, Nontuberculous/diagnosis , Mycobacterium kansasii/classification , Mycobacterium kansasii/cytology , Mycobacterium tuberculosis/classification , Mycobacterium tuberculosis/cytology , Tuberculosis/diagnosis , Cord Factors/metabolism , Culture Media , Humans , Mycobacterium Infections, Nontuberculous/microbiology , Mycobacterium kansasii/growth & development , Mycobacterium kansasii/metabolism , Mycobacterium tuberculosis/growth & development , Mycobacterium tuberculosis/metabolism , Predictive Value of Tests , Sensitivity and Specificity , Tuberculosis/microbiology
5.
Medicina (B Aires) ; 58(6): 739-40, 1998.
Article in Spanish | MEDLINE | ID: mdl-10347969

ABSTRACT

Disseminated Gonococcal Infection (DGI) is very unusual in elderly patients and its association with Rhabdomyolysis (RML) has not been published for which reason we are presenting a case of RML secondary to DGI in an elderly women. We presume that the muscle damage was directly related with the gonococcal infection through toxin generation and release of endogenous mediators from mononuclear phagocytes and neutrophils and/or with ischemic injury due to altered tissue perfusion evidenced in this case by the presence of hypotension, oliguria and acidosis. We suggest that DGI be added to the RML infectious etiologies and considered in the initial differential diagnosis of all patients with polyarthritis and RML in order to facilitate an optimal treatment.


Subject(s)
Gonorrhea/complications , Rhabdomyolysis/etiology , Aged , Female , Gonorrhea/diagnosis , Gonorrhea/drug therapy , Humans , Rhabdomyolysis/diagnosis , Rhabdomyolysis/drug therapy , Syndrome
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