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1.
Sci Rep ; 12(1): 9631, 2022 06 10.
Article in English | MEDLINE | ID: mdl-35688914

ABSTRACT

This article uses Deep Learning technologies to safeguard DNA sequencing against Bio-Cyber attacks. We consider a hybrid attack scenario where the payload is encoded into a DNA sequence to activate a Trojan malware implanted in a software tool used in the sequencing pipeline in order to allow the perpetrators to gain control over the resources used in that pipeline during sequence analysis. The scenario considered in the paper is based on perpetrators submitting synthetically engineered DNA samples that contain digitally encoded IP address and port number of the perpetrator's machine in the DNA. Genetic analysis of the sample's DNA will decode the address that is used by the software Trojan malware to activate and trigger a remote connection. This approach can open up to multiple perpetrators to create connections to hijack the DNA sequencing pipeline. As a way of hiding the data, the perpetrators can avoid detection by encoding the address to maximise similarity with genuine DNAs, which we showed previously. However, in this paper we show how Deep Learning can be used to successfully detect and identify the trigger encoded data, in order to protect a DNA sequencing pipeline from Trojan attacks. The result shows nearly up to 100% accuracy in detection in such a novel Trojan attack scenario even after applying fragmentation encryption and steganography on the encoded trigger data. In addition, feasibility of designing and synthesizing encoded DNA for such Trojan payloads is validated by a wet lab experiment.


Subject(s)
Computer Security , Deep Learning , DNA/genetics , Sequence Analysis, DNA , Software
2.
East Mediterr Health J ; 16 Suppl: S61-8, 2010.
Article in English | MEDLINE | ID: mdl-21495590

ABSTRACT

Blindness and visual impairment are major causes of noncomrnunicable diseases in Pakistan. Two national population-based blindness surveys conducted in 1988 and 2002-04 demonstrated a reduction in prevalence of blindness from 1.78% to 0.9% with a significant drop in cataract blindness as a result of accelerated nationwide interventions and eye care integration in primary health care. In addition, between 2006 and 2008, 88 facilities were upgraded as a result of the national eye health programme. These measures resulted in a 279% increase in eye outpatient attendances and a 375% increase in eye surgeries performed. Investment in human resources development and policy change contributed significantly to the sustainability of the programme. Key challenges facing the programme include aligning national eye health strategies with health system strengthening informed through health systems research. This paper attempts to document this extraordinary success.


Subject(s)
Blindness/prevention & control , National Health Programs/organization & administration , Blindness/epidemiology , Blindness/etiology , Health Policy , Health Surveys , Humans , Pakistan/epidemiology , Prevalence , Program Evaluation
3.
(East. Mediterr. health j).
in English | WHO IRIS | ID: who-118023

ABSTRACT

Blindness and visual impairment are major causes of noncommunicable diseases in Pakistan. Two national population-based blindness surveys conducted in 1988 and 2002-04 demonstrated a reduction in prevalence of blindness from 1.78% to 0.9% with a significant drop in cataract blindness as a result of accelerated nationwide interventions and eye care integration in primary health care. In addition, between 2006 and 2008r 88 facilities were upgraded as a result of the national eye health programme. These measures resulted in a 279% increase in eye outpatient attendances and a 375% increase in eye surgeries performed. Investment in human resources development and policy change contributed significantly to the sustainability of the programme. Key challenges facing the programme include aligning national eye health strategies with health system strengthening informed through health systems research. This gaper attempts to document this extraordinary success


Subject(s)
Health Systems Plans , Blindness , Vision, Low , Primary Health Care , National Health Programs , Delivery of Health Care, Integrated
4.
Community Eye Health ; 14(40): 60-1, 2001.
Article in English | MEDLINE | ID: mdl-17491935
5.
(East. Mediterr. health j).
in English | WHO IRIS | ID: who-118474

ABSTRACT

The prevalence and etiology of visual loss and eye diseases were determined in a resident Afghan refugee community in northern Pakistan. The survey included 1156 people and revealed that 2.1% of the population were blind and 6.9% were visually impaired according to WHO criteria. The leading causes of blindness included cataract [62.5%], uncorrected refractive errors [16.6%], retinal degeneration/dystrophy [12.5%], glaucoma [4.2%] and microphthalmos [4.2%]. The causes of visual loss were uncorrected refractive errors [46.2%], cataract [32.7%] and corneal opacities [4.8%]. These conditions were also important causes of unilateral lost vision. Active trachoma was found in 3.7% of all children under 10 years of age


Subject(s)
Prevalence , Eye Diseases , Health Surveys , Blindness , Visual Acuity , Cataract , Glaucoma , Refractive Errors , Retinal Degeneration , Vision, Low
6.
East Afr Med J ; 67(7): 518-21, 1990 Jul.
Article in English | MEDLINE | ID: mdl-2226232

ABSTRACT

A patient with confirmed acquired immune deficiency syndrome (AIDS) and disseminated Kaposi's sarcoma was seen in the Eye Clinic, Kenyatta National Hospital, and was found to have involvement of the conjunctiva and lids, confirmed by biopsy. He also had retinal haemorrhages and cotton-wool spots. Kaposi's sarcoma of the conjunctiva may be confused with a subconjunctival haemorrhage.


Subject(s)
Acquired Immunodeficiency Syndrome/complications , Conjunctival Neoplasms/etiology , Sarcoma, Kaposi/etiology , Adult , Conjunctival Neoplasms/diagnosis , Conjunctival Neoplasms/pathology , Humans , Male , Sarcoma, Kaposi/diagnosis , Sarcoma, Kaposi/pathology
7.
East Afr Med J ; 67(7): 522-6, 1990 Jul.
Article in English | MEDLINE | ID: mdl-2226233

ABSTRACT

A case is described of an 8 year old child who presented with Herpes Zoster Ophthalmicus involving the left eye. He had a positive history of pulmonary tuberculosis, repeated hospital admissions and blood transfusion. He was confirmed to have Acquired Immune Deficiency Syndrome. During the course of his followup, he developed cotton-wool spots and perivasculitis in the right eye. The mother was found to be seropositive while the father was seronegative.


Subject(s)
Acquired Immunodeficiency Syndrome/complications , Herpes Zoster Ophthalmicus/etiology , Child , Herpes Zoster Ophthalmicus/diagnosis , Herpes Zoster Ophthalmicus/pathology , Humans , Male , Visual Acuity
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