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1.
Zookeys ; 1020: 1-198, 2021.
Article in English | MEDLINE | ID: mdl-33708002

ABSTRACT

In Australia, the deep-water (bathyal and abyssal) benthic invertebrate fauna is poorly known in comparison with that of shallow (subtidal and shelf) habitats. Benthic fauna from the deep eastern Australian margin was sampled systematically for the first time during 2017 RV 'Investigator' voyage 'Sampling the Abyss'. Box core, Brenke sledge, and beam trawl samples were collected at one-degree intervals from Tasmania, 42°S, to southern Queensland, 24°S, from 900 to 4800 m depth. Annelids collected were identified by taxonomic experts on individual families around the world. A complete list of all identified species is presented, accompanied with brief morphological diagnoses, taxonomic remarks, and colour images. A total of more than 6000 annelid specimens consisting of 50 families (47 Polychaeta, one Echiura, two Sipuncula) and 214 species were recovered. Twenty-seven species were given valid names, 45 were assigned the qualifier cf., 87 the qualifier sp., and 55 species were considered new to science. Geographical ranges of 16 morphospecies extended along the eastern Australian margin to the Great Australian Bight, South Australia; however, these ranges need to be confirmed with genetic data. This work providing critical baseline biodiversity data on an important group of benthic invertebrates from a virtually unknown region of the world's ocean will act as a springboard for future taxonomic and biogeographic studies in the area.

2.
Zootaxa ; 4019: 70-97, 2015 Sep 18.
Article in English | MEDLINE | ID: mdl-26624067

ABSTRACT

Eight species of Glyceridae (Glycera brevicirris, Glycera cf. lapidum, Glycera onomichiensis, Glycera sagittariae, Glycera tesselata, Glycera tridactyla, Glycerella magellanica, Hemipodia cf. simplex) and six species of Goniadidae (Goniada antipoda, Goniada cf. brunnea, Goniada echinulata, Goniada emerita, Goniada grahami, Goniada paucidens) have been collected during several expeditions to the vicinity of Lizard Island (Australia, Queensland). An identification key to the Glyceriformia that inhabit the region is presented. Detailed and illustrated morphological descriptions are given for all investigated species.


Subject(s)
Polychaeta/classification , Animal Distribution , Animal Structures/anatomy & histology , Animal Structures/growth & development , Animals , Australia , Body Size , Ecosystem , Female , Islands , Male , Organ Size , Polychaeta/anatomy & histology , Polychaeta/growth & development
3.
Genome Biol Evol ; 7(12): 3443-62, 2015 Nov 19.
Article in English | MEDLINE | ID: mdl-26590213

ABSTRACT

Glyceridae (Annelida) are a group of venomous annelids distributed worldwide from intertidal to abyssal depths. To trace the evolutionary history and complexity of glycerid venom cocktails, a solid backbone phylogeny of this group is essential. We therefore aimed to reconstruct the phylogenetic relationships of these annelids using Illumina sequencing technology. We constructed whole-genome shotgun libraries for 19 glycerid specimens and 1 outgroup species (Glycinde armigera). The chosen target genes comprise 13 mitochondrial proteins, 2 ribosomal mitochondrial genes, and 4 nuclear loci (18SrRNA, 28SrRNA, ITS1, and ITS2). Based on partitioned maximum likelihood as well as Bayesian analyses of the resulting supermatrix, we were finally able to resolve a robust glycerid phylogeny and identified three clades comprising the majority of taxa. Furthermore, we detected group II introns inside the cox1 gene of two analyzed glycerid specimens, with two different insertions in one of these species. Moreover, we generated reduced data sets comprising 10 million, 4 million, and 1 million reads from the original data sets to test the influence of the sequencing depth on assembling complete mitochondrial genomes from low coverage genome data. We estimated the coverage of mitochondrial genome sequences in each data set size by mapping the filtered Illumina reads against the respective mitochondrial contigs. By comparing the contig coverage calculated in all data set sizes, we got a hint for the scalability of our genome skimming approach. This allows estimating more precisely the number of reads that are at least necessary to reconstruct complete mitochondrial genomes in Glyceridae and probably non-model organisms in general.


Subject(s)
Annelida/genetics , Evolution, Molecular , Genome, Helminth , Genome, Mitochondrial , Phylogeny , Animals , Annelida/classification , RNA, Ribosomal/genetics
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