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1.
PLoS One ; 13(4): e0193405, 2018.
Article in English | MEDLINE | ID: mdl-29694353

ABSTRACT

We conducted a series of experiments to examine short-term (2-5 days) effects of abrupt increases in the partial pressure of carbon dioxide (pCO2) in seawater on rates of primary and bacterial production at Station ALOHA (22°45' N, 158° W) in the North Pacific Subtropical Gyre (NPSG). The majority of experiments (8 of 10 total) displayed no response in rates of primary production (measured by 14C-bicarbonate assimilation; 14C-PP) under elevated pCO2 (~1100 µatm) compared to ambient pCO2 (~387 µatm). In 2 of 10 experiments, rates of 14C-PP decreased significantly (~43%) under elevated pCO2 treatments relative to controls. Similarly, no significant differences between treatments were observed in 6 of 7 experiments where bacterial production was measured via incorporation of 3H-leucine (3H-Leu), while in 1 experiment, rates of 3H-Leu incorporation measured in the dark (3H-LeuDark) increased more than 2-fold under high pCO2 conditions. We also examined photoperiod-length, depth-dependent (0-125 m) responses in rates of 14C-PP and 3H-Leu incorporation to abrupt pCO2 increases (to ~750 µatm). In the majority of these depth-resolved experiments (4 of 5 total), rates of 14C-PP demonstrated no consistent response to elevated pCO2. In 2 of 5 depth-resolved experiments, rates of 3H-LeuDark incorporation were lower (10% to 15%) under elevated pCO2 compared to controls. Our results revealed that rates of 14C-PP and bacterial production in this persistently oligotrophic habitat generally demonstrated no or weak responses to abrupt changes in pCO2. We postulate that any effects caused by changes in pCO2 may be masked or outweighed by the role that nutrient availability and temperature play in controlling metabolism in this ecosystem.


Subject(s)
Carbon Dioxide/analysis , Ecosystem , Plankton/growth & development , Seawater/chemistry , Pacific Ocean , Temperature
2.
Microb Ecol ; 70(2): 445-58, 2015 Aug.
Article in English | MEDLINE | ID: mdl-25805213

ABSTRACT

Biostimulation through the addition of inorganic nutrients has been the most widely practiced bioremediation strategy in oil-polluted marine waters. However, little attention has so far been paid to the microbial food web and the impact of top-down control that directly or indirectly influences the success of the bioremediation. We designed a mesocosm experiment using pre-filtered (<50 µm) surface seawater from the Bay of Banyuls-sur-Mer (North-Western Mediterranean Sea) and examined the top-down effect exerted by heterotrophic nanoflagellates (HNF) and virus-like particles (VLP) on prokaryotic abundance, activity and diversity in the presence or absence of diesel fuel. Prokaryotes, HNF and VLP abundances showed a predator-prey succession, with a co-development of HNF and VLP. In the polluted system, we observed a stronger impact of viral lysis on prokaryotic abundances than in the control. Analysis of the diversity revealed that a bloom of Vibrio sp. occurred in the polluted mesocosm. That bloom was rapidly followed by a less abundant and more even community of predation-resistant bacteria, including known hydrocarbon degraders such as Oleispira spp. and Methylophaga spp. and opportunistic bacteria such as Percisivirga spp., Roseobacter spp. and Phaeobacter spp. The shift in prokaryotic dominance in response to viral lysis provided clear evidence of the 'killing the winner' model. Nevertheless, despite clear effects on prokaryotic abundance, activity and diversity, the diesel degradation was not impacted by top-down control. The present study investigates for the first time the functioning of a complex microbial network (including VLP) using a nutrient-based biostimulation strategy and highlights some key processes useful for tailoring bioremediation.


Subject(s)
Bacteria/metabolism , Seawater/microbiology , Bacteria/classification , Biodegradation, Environmental , Ecosystem , Microbial Consortia , Petroleum/microbiology , Water Microbiology
3.
Appl Environ Microbiol ; 78(18): 6516-23, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22773638

ABSTRACT

Resolution of the nitrogen (N) cycle in the marine environment requires an accurate assessment of dinitrogen (N(2)) fixation. We present here an update on progress in conducting field measurements of acetylene reduction (AR) and (15)N(2) tracer assimilation in the oligotrophic North Pacific Subtropical Gyre (NPSG). The AR assay was conducted on discrete seawater samples using a headspace analysis system, followed by quantification of ethylene (C(2)H(4)) with a reducing compound photodetector. The rates of C(2)H(4) production were measurable for nonconcentrated seawater samples after an incubation period of 3 to 4 h. The (15)N(2) tracer measurements compared the addition of (15)N(2) as a gas bubble and dissolved as (15)N(2) enriched seawater. On all sampling occasions and at all depths, a 2- to 6-fold increase in the rate of (15)N(2) assimilation was measured when (15)N(2)-enriched seawater was added to the seawater sample compared to the addition of (15)N(2) as a gas bubble. In addition, we show that the (15)N(2)-enriched seawater can be prepared prior to its use with no detectable loss (<1.7%) of dissolved (15)N(2) during 4 weeks of storage, facilitating its use in the field. The ratio of C(2)H(4) production to (15)N(2) assimilation varied from 7 to 27 when measured simultaneously in surface seawater samples. Collectively, the modifications to the AR assay and the (15)N(2) assimilation technique present opportunities for more accurate and high frequency measurements (e.g., diel scale) of N(2) fixation, providing further insight into the contribution of different groups of diazotrophs to the input of N in the global oceans.


Subject(s)
Aquatic Organisms/metabolism , Marine Biology/methods , Nitrogen Fixation , Seawater/microbiology , Acetylene/metabolism , Isotope Labeling , Nitrogen/metabolism , Oxidation-Reduction , Pacific Ocean , Time Factors
4.
Environ Microbiol ; 13(10): 2768-77, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21895910

ABSTRACT

The effect of inorganic particle concentrations on bacteria-virus-nanoflagellate dynamics in an oligotrophic coastal system was investigated using a model aluminosilicate, kaolinite, with a modal size of 2.1 µm. Virus-only, bacteria-only and bacteria-virus-nanoflagellate incubations were carried out at increasing kaolinite concentrations to elucidate the microbial response. The sorption of bacteria and viruses to kaolinite particles was negligible over a concentration range of 1-50 mg l(-1). In contrast, the abundance of heterotrophic nanoflagellates was negatively correlated with kaolinite concentrations following both 48 and 96 h incubations. Calculated nanoflagellate bacterial ingestion rates were reduced by 5-35% depending on kaolinite particle concentration. In the bacteria-virus-nanoflagellate incubations viral production increased by 56 × 10(3) to 104 × 10(3) VLPs ml(-1) h(-1) as a function of kaolinite particle concentration. Our results demonstrate for the first time that the interaction of microbial populations with inorganic particles can shift the balance between protist and virally mediated mortality of marine heterotrophic prokaryotes.


Subject(s)
Bacteria/metabolism , Dinoflagellida/physiology , Food Chain , Viruses/metabolism , Water Microbiology , Absorption , Bacteria/virology , Colony Count, Microbial , Dinoflagellida/microbiology , Dinoflagellida/virology , Ecosystem , Kaolin/metabolism , Seawater/microbiology , Seawater/virology
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