ABSTRACT
Mimosa scabrella Benth., popularly known as ''bracatinga'', is a pioneer and endemic species of Brazil, occurring in Mixed Ombrophilous Forest associated with Brazilian Atlantic Rainforest biomes. It is a fast-growing tree of the Fabaceae family that facilitates the dynamics of ecological succession. SSR development, when there is no genome sequence, is time and labor intensive and there are no molecular markers for M. scabrella. We developed and validated the first microsatellite markers for this tetraploid species, evaluating mother trees and progenies. Using Illumina sequencing, we identified 290 SSR loci and 211 primer pairs. After 31 SSR loci PCR/agarose electrophoresis selection, a subset of 11 primer pairs was synthetized with fluorescence in the forward primer for PCR and capillary electrophoresis validation with leaf DNA of 33 adult and 411 progeny individuals. Polymorphic locus percentage was 36, 4 in 11 loci, 3 chloroplast SSRs, and 1 nuclear SSR. Allele number of polymorphic loci ranged from 2 to 11 alleles considering all sampling. All 11 primer pairs were also tested for cross-species amplification for five Fabaceae-Mimosoideae species, ranging from 2 loci transferred to Calliandra tweedii Benth. and all 11 loci transferred to Mimosa taimbensis Burkart. The assessed and validated SSR markers for M. scabrella are suitable and useful for analysis and population genetic studies.
Subject(s)
DNA Primers/chemical synthesis , Microsatellite Repeats , Mimosa/genetics , Cell Nucleus/genetics , Chloroplasts/genetics , Genetic Markers , Sequence Analysis, DNA/methods , Species Specificity , TetraploidyABSTRACT
RESUMO Varronia curassavica Jacq. (Boraginaceae) está presente na vegetação de restinga e apresenta relevantes propriedades medicinais. A espécie é explorada especialmente por comunidades locais e pela indústria farmacêutica, porém, carece de informações ecológicas e genéticas a seu respeito. Nesse contexto, o estudo foi conduzido com o objetivo de caracterizar a diversidade genética de três populações de V. curassavica em áreas de restinga na Ilha de Santa Catarina. Foram coletadas folhas de 50 indivíduos adultos em cada uma das três áreas de estudo e as frequências alélicas das populações foram obtidas a partir de 14 locos alozímicos. Foram encontrados 25 alelos distintos nas três populações, sendo dois alelos exclusivos. As populações apresentaram diversidade genética média de 0,111 e índice de fixação médio de -0,060 (-0,273 até 0,222). Os níveis de diversidade são intermediários, semelhantes aos exibidos por espécies da mesma família ou de características ecológicas semelhantes. Os índices de fixação foram todos significativos e discrepantes entre as populações, sendo que duas delas apresentaram excesso de heterozigotos. A divergência genética interpopulacional foi significativa e igual a 0,079, considerada moderada e sugerindo efeitos de subdivisão populacional. Os níveis de diversidade genética encontrados e a redução populacional causada pela redução e fragmentação dos habitats em que a espécie ocorre sugerem medidas de conservação ex situ e demandam maior rigor na proteção legal de áreas de proteção permanente.
ABSTRACT The Varronia curassavica Jacq. (Boraginaceae) is present in restinga vegetation and shows relevant medicinal properties. The species is exploited by local communities and by the pharmaceutical industry; however, it lacks ecological and genetic information. Thus, this study aimed to characterize the genetic diversity of three V. curassavica populations in restinga areas of Santa Catarina Island. Leaves of 50 adult individuals were sampled in each of the three study areas and the allelic frequencies were obtained from 14 allozyme loci. Twenty-five different alleles were found in the three populations, two of them being exclusive. The populations showed, on average, a genetic diversity of 0,111 and a fixation index of -0,060 (-0,273 to 0,222). The diversity levels are intermediary, similar to those ones owned by species of the same family or with similar ecological traits. The fixation indexes were all significant and discrepant among the populations, with two of them showing excess of heterozygotes. The genetic divergence among populations was significant and equal to 0,079, which is considered moderate and suggests effects of population subdivision. The levels of genetic diversity found and the population decrease caused by reduction and fragmentation of habitats in which the species are present implies in ex situ conservation measures and a higher enforcement of the legal preservation of permanent protected areas.
Subject(s)
Humans , Cordia/classification , Genetic Structures/ethics , Plants, Medicinal/chemistryABSTRACT
Crude methanolic extracts and fractions from the aerial parts of seven species of Hypericum (H. caprifoliatum Cham. and Schltdl., H. carinatum Griseb., H. connatum Lam., H. ternum A. St.-Hil., H. myrianthum Cham. and Schltdl., H. piriai Arechav. and H. polyanthemum Klotzsch ex Reichardt) growing in southern Brazil were analyzed for their in vitro antifungal activity against a panel of standardized and clinical opportunistic pathogenic yeasts and filamentous fungi, including dermatophytes, by the agar dilution method. Chloroform and hexane extracts of H. ternum showed the greatest activity among extracts tested.
Subject(s)
Antifungal Agents/pharmacology , Candida/drug effects , Hypericum , Phytotherapy , Plant Extracts/pharmacology , Antifungal Agents/administration & dosage , Antifungal Agents/therapeutic use , Humans , Microbial Sensitivity Tests , Plant Components, Aerial , Plant Extracts/administration & dosage , Plant Extracts/therapeutic useABSTRACT
The crude methanolic extracts of six species of Hypericum [H. caprifoliatum Cham. & Schlecht., H. carinatum Griseb., H. connatum Lam., H. ternum A. St. Hil., H. myrianthum Cham. & Schlecht. and H. polyanthemum Klotzsch ex Reichardt] growing in southern Brazil were analyzed for antimicrobial activity against several microorganisms (bacteria and fungi). The most active plant was H. caprifoliatum, which showed activity against Staphylococcus aureus. Only H. polyanthemum and H. ternum extracts were active against Bacillus subtilis. None of the crude methanolic extracts showed activity against S. epidermidis, Escherichia coli or Saccharomyces cerevisiae. Extracts from these species were evaluated chemically and tannin, flavonoid and phenolic acids were the prominent compounds. The plants contained quercitrin, hyperoside (except H. connatum) and, less frequently, isoquercitrin and chlorogenic acid. In contrast to H. perforatum, which has high concentrations of rutin, these species do not produce this flavonoid or it appears as traces. The tannin concentration varied between 5.1 and 16.7% in H. myrianthum and H. ternum, respectively.
