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1.
Nanotechnology ; 29(45): 455603, 2018 Nov 09.
Article in English | MEDLINE | ID: mdl-30156560

ABSTRACT

Thermal chemical vapor deposition (TCVD) is the current method of choice to fabricate high quality, large area graphene films on catalytic copper substrates. In order to obtain sufficiently high growth rates at reduced growth temperatures an efficient dissociation of the precursor molecules already in the gas phase is required. We used plasma enhanced chemical vapor deposition (PECVD) to fabricate high quality graphene films at various temperatures. The efficient, plasma-induced dissociation of the precursor molecules results in an activation energy of 2.2 eV for the growth rate in PECVD, which is reduced by almost a factor of 2 compared to TCVD growth in the same reactor. By varying the growth time, we demonstrate that crystalline graphene grains surrounded by amorphous carbon formed during the early stage of growth merge into an almost defect-free graphene film with growth time via a recrystallization process. Almost defect-free graphene is prepared with negligible (I D/I G < 0.1) contributions of the D peak in Raman spectroscopy and with a sheet resistance down to 470 Ω/sq.

2.
Nanotechnology ; 29(29): 295704, 2018 Jul 20.
Article in English | MEDLINE | ID: mdl-29620017

ABSTRACT

Fabrication of transition metal dichalcogenides (TMDCs) via metalorganic chemical vapor deposition (MOCVD) represents one of the most attractive routes to large-scale 2D material layers. Although good homogeneity and electrical conductance have been reported recently, the relation between growth parameters and photoluminescence (PL) intensity-one of the most important parameters for optoelectronic applications-has not yet been discussed for MOCVD TMDCs. In this work, MoS2 is grown via MOCVD on sapphire (0001) substrates using molybdenum hexacarbonyl (Mo(CO)6, MCO) and di-tert-butyl sulphide as precursor materials. A prebake step under H2 atmosphere combined with a reduced MCO precursor flow increases the crystal grain size by one order of magnitude and strongly enhances PL intensity with a clear correlation to the grain size. A decrease of the linewidth of both Raman resonances and PL spectra down to full width at half maxima of 3.2 cm-1 for the E 2g Raman mode and 60 meV for the overall PL spectrum indicate a reduced defect density at optimized growth conditions.

3.
Nanotechnology ; 28(18): 185601, 2017 May 05.
Article in English | MEDLINE | ID: mdl-28388593

ABSTRACT

The chemical vapor deposition (CVD) growth of graphene on copper is controlled by a complex interplay of substrate preparation, substrate temperature, pressure and flow of reactive gases. A large variety of recipes have been suggested in literature, often quite specific to the reactor, which is being used. Here, we report on a relation between growth rate and quality of graphene grown in a scalable 4″ CVD reactor. The growth rate is varied by substrate pre-treatment, chamber pressure, and methane to hydrogen (CH4:H2) ratio, respectively. We found that at lower growth rates graphene grains become hexagonal rather than randomly shaped, which leads to a reduced defect density and a sheet resistance down to 268 Ω/sq.

4.
Phys Rev Lett ; 107(16): 167601, 2011 Oct 14.
Article in English | MEDLINE | ID: mdl-22107431

ABSTRACT

The dynamics of optically detected nuclear magnetic resonance is studied in n-GaAs via time-resolved Kerr rotation using an on-chip microcoil for rf field generation. Both optically allowed and optically forbidden NMR are observed with a dynamics controlled by the interplay between dynamic nuclear polarization via hyperfine interaction with optically generated spin-polarized electrons and nuclear spin depolarization due to magnetic resonance absorption. Comparing the characteristic nuclear spin relaxation rate obtained in experiment with master equation simulations, the underlying nuclear spin depolarization mechanism for each resonance is extracted.

5.
Z Orthop Unfall ; 149(1): 68-76, 2011 Jan.
Article in German | MEDLINE | ID: mdl-20941694

ABSTRACT

BACKGROUND: Mid-shaft clavicular fractures are mainly treated conservatively with an average incidence of non-union in 4.5 %. Gender, age, grade of fragment dislocation and comminution are risk factors to develop a pseudarthrosis. In contrast to patients who where operated on, conservative treatment was also associated with a higher complication rate and pain level as well as a poor shoulder function and cosmetic result. Therefore more patients are treated operatively, especially modern minimally invasive techniques have been developed and remain as equals to the standard plate fixation. PATIENTS/MATERIAL: Within a period of 24 months patients with a mid-shaft clavicular fracture were included into a prospective, non-randomised multicentre study. A modified AO classification was used. Patients were treated either conservatively, by plating or intramedullary nailing. Pain level, cosmetic result, shoulder function and complication rate were documented as well as the influence of the profession on the therapeutic strategy and duration of unfitness for work. RESULTS: 120 patients (95 male, 25 female) were included in the study. Fractures were caused in 35 (29 %) by a direct, in 85 (71 %) by an indirect trauma mechanism. Because of their lower grade fractures with overlapping fragments 47 (39 %) patients were treated conservatively with a figure-of-eight-bandage. Patients with higher graded fractures and fragment displacement were stabilised either by intramedullary nailing (n = 20, 27 %) or plate fixation (n = 53, 73 %). 96 (80 %) patients were examined at a follow-up of eight weeks and eight months after injury. Early freedom from pain (p = 0.014), a better cosmetic result (p = 0.1) and an improved subjective (p = 0.004) and objective (p = 0.01) shoulder function were statistically significant in operated patients. Clavicle shortening was often found to be significant in conservatively treated patients (p = 0.006). Duration of unfitness for work depended on the physical activity in the job. The complication rate was 15 % for each therapy, non-union was detected in one (0.8 %) patient. CONCLUSION: Mid-shaft clavicular fractures have to be classified by the criteria contact and number of fragments. Advantages of operative procedures are early freedom from pain and shoulder function recovery. Non-displaced low grade shaft fractures without shortening should be treated conservatively, whereas displaced low-grade shaft fractures have a better result after intramedullary nailing. Plate fixation should be predominantly used in dislocated and comminuted fractures as well as in patients with a high level of physical activity in their jobs.


Subject(s)
Clavicle/injuries , Clavicle/surgery , Fracture Fixation/statistics & numerical data , Fractures, Bone/epidemiology , Fractures, Bone/surgery , Adolescent , Adult , Aged , Female , Germany/epidemiology , Humans , Male , Middle Aged , Prevalence , Treatment Outcome
6.
Nanotechnology ; 20(38): 385702, 2009 Sep 23.
Article in English | MEDLINE | ID: mdl-19713586

ABSTRACT

We demonstrate the potential of Kelvin probe force microscopy for simultaneously probing the topography and the work function of individual nanowires. Our technique allows us to visualize both the material and the doping contrast in single GaAs-based nanowires without the need to electrically contact the nanowires. In a GaAs/GaP heterostructure nanowire, a core-shell structure is found. This is attributed to a thermally activated radial overgrowth of GaAs, while in the GaP region the vertical nanowire growth dominates. In partially p-doped GaAs nanowires the doping transitions can be localized and the width of the depletion layer is estimated.

7.
Nanotechnology ; 20(13): 135604, 2009 Apr 01.
Article in English | MEDLINE | ID: mdl-19420507

ABSTRACT

High quality Cr-doped ZnO nanoparticles from the gas phase were prepared and investigated with respect to their structural, optical and magnetic properties. The extended x-ray absorption fine structure and the x-ray absorption near edge structure of the particles verify that after nanoparticle preparation Cr is incorporated as Cr3+ ) at least partially on sites with a 4-fold oxygen configuration, most likely on a Zn site, into the wurtzite lattice. Despite the fact that Cr is known to act as an efficient non-radiative loss centre for near band gap emission (NBE), a pronounced NBE is obtained up to room temperature even for a nominal Cr concentration of 10 at.%. Annealing at 1000 degrees C results in a significant improvement of the photoluminescence efficiency and a reduced PL linewidth down to 2.9 meV at low temperatures while the structural and magnetic data indicate the formation of ZnCr2O4 clusters.

8.
Eur Respir J ; 32(5): 1289-94, 2008 Nov.
Article in English | MEDLINE | ID: mdl-18978135

ABSTRACT

Pulmonary hypertension (PH) leads to an increased right ventricular workload, cardiac failure and death. In idiopathic pulmonary arterial hypertension (PAH) the vasodilating vasoactive intestinal peptide (aviptadil) is deficient. The aim of the present study was to test the acute effects on haemodynamics and blood gases, and the safety, of a single dose of inhaled aviptadil in chronic PH. A total of 20 patients with PH (PAH in nine, PH in lung disease in eight and chronic thromboembolic PH in three) inhaled a single 100-microg dose of aviptadil during right-heart catheterisation. Haemodynamics and blood gases were measured. Aviptadil aerosol caused a small and temporary but significant selective pulmonary vasodilation, an improved stroke volume and mixed venous oxygen saturation. Overall, six patients experienced a pulmonary vascular resistance reduction of >20%. In patients with significant lung disease, aviptadil tended to improve oxygenation. The pulmonary vasodilating effect of aviptadil aerosol was modest and short-lived, did not cause any side-effects and led to a reduced workload of the right ventricle without affecting systemic blood pressure. Aviptadil inhalation tended to improve oxygenation in patients with significant lung disease. Further studies are needed to evaluate the full therapeutic potential of aviptadil aerosol, including higher doses and chronic treatment.


Subject(s)
Hypertension, Pulmonary/drug therapy , Hypertension, Pulmonary/physiopathology , Phentolamine/administration & dosage , Vasoactive Intestinal Peptide/administration & dosage , Vasoactive Intestinal Peptide/metabolism , Adult , Aerosols , Aged , Blood Pressure , Drug Combinations , Female , Heart Failure/pathology , Heart Ventricles/pathology , Humans , Lung Diseases/pathology , Male , Middle Aged , Oxygen/metabolism
9.
Phys Rev Lett ; 92(10): 106802, 2004 Mar 12.
Article in English | MEDLINE | ID: mdl-15089225

ABSTRACT

Photoluminescence (PL) spectroscopy with subwavelength lateral resolution has been employed to probe individual localization centers in a thin InGaN/GaN quantum well. Spectrally narrow emission lines with a linewidth as small as 0.8 meV can be resolved, originating from the recombination of an electron-hole pair occupying a single localized state. Surprisingly, the individual emission lines show a pronounced blueshift when raising the temperature, while virtually no energy shift occurs for increasing excitation density. These findings are in remarkable contrast to the behavior usually found in macro-PL measurements and give a fundamental new insight into the recombination process in semiconductor nanostructures in the presence of localization and strong internal electric fields. We find clear indications for a biexciton state with a negative binding energy of about -5+/-0.7 meV.

10.
Phys Rev Lett ; 89(17): 177403, 2002 Oct 21.
Article in English | MEDLINE | ID: mdl-12398705

ABSTRACT

We demonstrate the generation of triggered single photons at a predetermined and well defined energy using the radiative recombination of single nitrogen-bound excitons in a semiconductor. The nitrogen atoms are embedded in a ZnSe quantum well structure and were excited by nonresonant optical pumping (82 MHz) at low temperature (4 K). We find resolution-limited photoluminescence lines (280 micro eV) which display photon antibunching under continuous optical pumping. Our results also suggest that single nitrogen-bound excitons are well suited for cavity quantum electrodynamics experiments.

11.
Phys Rev Lett ; 89(12): 127201, 2002 Sep 16.
Article in English | MEDLINE | ID: mdl-12225119

ABSTRACT

Statistical fluctuations of the magnetization are measured on the nanometer scale. As the experimental monitor we use the characteristic photoluminescence signal of a single electron-hole pair confined in one magnetic semiconductor quantum dot, which sensitively depends on the alignment of the magnetic ion spins. Quantitative access to statistical magnetic fluctuations is obtained by analyzing the linewidth broadening of the single dot emission. Our all-optical technique allows us to address a magnetic moment of only approximately equal 100 micro(B) and to resolve statistical changes on the order of a few micro(B).

12.
Phys Rev Lett ; 88(2): 027402, 2002 Jan 14.
Article in English | MEDLINE | ID: mdl-11801035

ABSTRACT

The dynamical response of a paramagnetic spin system to the exchange field of quasi-zero-dimensional electron-hole pairs in semiconductor quantum dots is investigated by time-resolved spectroscopy. The spin response time is extracted from the transient spectral shift of the photoluminescence signal caused by the dynamical spin alignment of magnetic ions incorporated in the crystal matrix. The formation of this ferromagnetically aligned spin complex is demonstrated to be surprisingly stable as compared to bulk systems, even at elevated temperatures and high external magnetic fields.

13.
J Mass Spectrom ; 36(9): 1038-52, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11599082

ABSTRACT

This study explores the potential of a novel electrospray-based method, termed gas-phase electrophoretic mobility molecular analysis (GEMMA), allowing the molecular mass determination of peptides, proteins and noncovalent biocomplexes up to 2 MDa (dimer of immunglobulin M). The macromolecular ions were formed by nano electrospray ionization (ESI) in the 'cone jet' mode. The multiple charged state of the monodisperse droplets/ions generated was reduced by means of bipolar ionized air (generated by an alpha-particle source) to yield exclusively singly charged positive and negative ions as well as neutrals. These ions are separated subsequently at atmospheric pressure using a nano differential mobility analyzer according to their electrophoretic mobility in air. Finally, the ions are detected using a standard condensation particle counter. Data were expressed as electrophoretic mobility diameters by applying the Millikan equation. The measured electrophoretic mobility diameters, or Millikan diameters, of 32 well-defined proteins were plotted against their molecular weights in the range 3.5 to 1920 kDa and exhibited an excellent squared correlation coefficient (r(2) = 0.999). This finding allowed the exact molecular weight determination of large (glyco)proteins and noncovalent biocomplexes by means of this new technique with a mass accuracy of +/-5.6% up to 2 MDa at the femtomole level. From the molecular masses of the weakly bound, large protein complexes thus obtained, the binding stoichiometry of the intact complex and the complex stability as a function of pH, for example, can be derived. Examples of specific protein complexes, such as the avidin or catalase homo-tetramer, are used to illustrate the potential of the technique for characterization of high-mass biospecific complexes. A discussion of current and future applications of charge-reduced nano ESI GEMMA, such as chemical reaction monitoring (reduction process of immunglobulin G) or size determination of an intact virus, a supramolecular complex, and monitoring of partial dissociation of a human rhinoviruses, is provided.


Subject(s)
Glycoproteins/chemistry , Peptides/chemistry , Proteins/chemistry , Viruses/chemistry , Electrophoresis , Immunoglobulin G/chemistry , Molecular Weight , Rhinovirus/chemistry , Spectrometry, Mass, Electrospray Ionization
14.
Mol Pharmacol ; 60(5): 900-6, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11641417

ABSTRACT

In this study, the differential role of the cyclin-dependent kinase (CDK) inhibitors p21(Waf1) and p27(Kip1) in cell cycle regulation was proposed for use in screening natural or synthetic compounds for cell cycle-dependent (particularly M phase-dependent) antineoplastic activity. p21(Waf1) or p27(Kip1) was ectopically expressed with an ecdysone-inducible mammalian expression system in a human colon adenocarcinoma cell line. Induction of p21(Waf1) or p27(Kip1) expression inhibited the activities of CDK2 and completely arrested cells at G(1) phase of the cell cycle by p27(Kip1) and at G(1) and G(2) phases by p21(Waf1). We examined the sensitivity of these cells to several antineoplastic agents known to be cell cycle-dependent or -independent. Substantially increased resistance to cell cycle-dependent antineoplastic agents was found in the cells when the expression of p21(Waf1) or p27(Kip1) was induced. In contrast, only a desensitization to cell cycle-independent antineoplastic agents was found in the cells arrested by p21(Waf1) or p27(Kip1). Because p21(Waf1) induces an additional block at G(2) phase that inhibits cell entry into M phase, we further examined the difference between p21(Waf1)- and p27(Kip1)-induced cells in their sensitivity to D-24851, a novel M phase-dependent compound. We found that induction of p21(Waf1) after exposure of the cells to D-24851 conferred stronger resistance than did induction of p27(Kip1). Taken together, our results suggest that the differential effect of p21(Waf1) and p27(Kip1) on cell cycle regulation may be advantageous for screening chemical libraries for novel antineoplastic candidates that are cell cycle-dependent, and M phase-dependent in particular.


Subject(s)
Acetamides/pharmacology , Antineoplastic Agents/pharmacology , Cell Cycle Proteins/physiology , Cyclins/physiology , Indoles/pharmacology , Mitosis/drug effects , Tumor Suppressor Proteins/physiology , Cell Cycle/drug effects , Cell Survival/drug effects , Cyclin-Dependent Kinase Inhibitor p21 , Cyclin-Dependent Kinase Inhibitor p27 , Drug Design , Humans , Tumor Cells, Cultured
15.
J Mass Spectrom ; 36(2): 124-39, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11288194

ABSTRACT

A general approach for the detailed characterization of sodium borohydride-reduced peptidoglycan fragments (syn. muropeptides), produced by muramidase digestion of the purified sacculus isolated from Bacillus subtilis (vegetative cell form of the wild type and a dacA mutant) and Bacillus megaterium (endospore form), is outlined based on UV matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) and nano-electrospray ionization (nESI) quadrupole ion trap (QIT) mass spectrometry (MS). After enzymatic digestion and reduction of the resulting muropeptides, the complex glycopeptide mixture was separated and fractionated by reversed-phase high-performance liquid chromatography. Prior to mass spectrometric analysis, the muropeptide samples were subjected to a desalting step and an aliquot was taken for amino acid analysis. Initial molecular mass determination of these peptidoglycan fragments (ranging from monomeric to tetrameric muropeptides) was performed by positive and negative ion MALDI-MS using the thin-layer technique with the matrix alpha-cyano-4-hydroxycinnamic acid. The results demonstrated that for the fast molecular mass determination of large sample numbers in the 0.8-10 pmol range and with a mass accuracy of +/-0.07%, negative ion MALDI-MS in the linear TOF mode is the method of choice. After this kind of muropeptide screening often a detailed primary structural analysis is required owing to ambiguous data. Structural data could be obtained from peptidoglycan monomers by post-source decay (PSD) fragment ion analysis, but not from dimers or higher oligomers and not with the necessary sensitivity. Multistage collision-induced dissociation (CID) experiments performed on an nESI-QIT instrument were found to be the superior method for structural characterization of not only monomeric but also of dimeric and trimeric muropeptides. Up to MS4 experiments were sometimes necessary to obtain unambiguous structural information. Three examples are presented: (a) CID MSn (n = 2-4) of a peptidoglycan monomer (disaccharide-tripeptide) isolated from B. subtilis (wild type, vegetative cell form), (b) CID MSn (n = 2-4) of a peptidoglycan dimer (bis-disaccharide-tetrapentapeptide) obtained from a B. subtilis mutant (vegetative cell form) and (c) CID MS2 of a peptidoglycan trimer (a linear hexasaccharide with two peptide side chains) isolated from the spore cortex of B. megaterium. All MS(n) experiments were performed on singly charged precursor ions and the MS2 spectra were dominated by fragments derived from interglycosidic bond cleavages. MS3 and MS4 spectra exhibited mainly peptide moiety fragment ions. In case of the bis-disaccharide-tetrapentapeptide, the peptide branching point could be determined based on MS3 and MS4 spectra. The results demonstrate the utility of nESI-QIT-MS towards the facile determination of the glycan sequence, the peptide linkage and the peptide sequence and branching of purified muropeptides (monomeric up to trimeric forms). The wealth of structural information generated by nESI-QIT-MSn is unsurpassed by any other individual technique.


Subject(s)
Bacillus/chemistry , Peptidoglycan/chemistry , Peptidoglycan/analysis , Spectrometry, Mass, Electrospray Ionization , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
16.
Cancer Res ; 61(1): 392-9, 2001 Jan 01.
Article in English | MEDLINE | ID: mdl-11196193

ABSTRACT

N-(pyridin-4-yl)-[1-(4-chlorbenzyl)-indol-3-yl]-glyoxyl-amid (D-24851) is a novel synthetic compound that was identified in a cell-based screening assay to discover cytotoxic drugs. D-24851 destabilizes microtubules and blocks cell cycle transition specifically at G2-M phase. The binding site of D-24851 does not overlap with the tubulin binding sites of known microtubule-destabilizing agents like vincristine or colchicine. In vitro, D-24851 has potent cytotoxic activity toward a panel of established human tumor cell lines including SKOV3 ovarian cancer, U87 glioblastoma, and ASPC-1 pancreatic cancer cells. In vivo, oral D-24851 treatment induced complete tumor regressions (cures) in rats bearing Yoshida AH13 sarcomas. Of importance is that the administration of curative doses of D-24851 to the animals revealed no systemic toxicity in terms of body weight loss and neurotoxicity in contrast to the administration of paclitaxel or vincristine. Interestingly, multidrug-resistant cell lines generated by vincristine-driven selection or transfection with the Mr 170,000 P-glycoprotein encoding cDNA were rendered resistant toward paclitaxel, vincristine, or doxorubicin but not towards D-24851 when compared with the parental cells. Because of its synthetic nature, its oral applicability, its potent in vitro and in vivo antitumoral activity, its efficacy against multidrug-resistant tumors, and the lack of neurotoxicity, D-24851 may have significant potential for the treatment of various malignancies.


Subject(s)
Acetamides/pharmacology , Antineoplastic Agents/pharmacology , Indoles/pharmacology , ATP Binding Cassette Transporter, Subfamily B, Member 1/metabolism , ATP-Binding Cassette Transporters/metabolism , Acetamides/metabolism , Acetamides/toxicity , Animals , Antineoplastic Agents/metabolism , Antineoplastic Agents/toxicity , Binding Sites , Binding, Competitive , Cell Cycle/drug effects , Cell Division/drug effects , Colchicine/metabolism , Drug Resistance, Multiple , Drug Resistance, Neoplasm , Female , Humans , Indoles/metabolism , Indoles/toxicity , Microtubules/drug effects , Motor Activity/drug effects , Multidrug Resistance-Associated Proteins , Nervous System Diseases/chemically induced , Neural Conduction/drug effects , Rats , Rats, Sprague-Dawley , Rats, Wistar , Sarcoma, Yoshida/drug therapy , Tubulin/metabolism , Tumor Cells, Cultured/drug effects , Vincristine/metabolism
17.
J Cell Biol ; 146(4): 723-30, 1999 Aug 23.
Article in English | MEDLINE | ID: mdl-10459008

ABSTRACT

Protein targeting to the membrane of the ER is regulated by three GTPases, the 54-kD subunit of the signal recognition particle (SRP) and the alpha- and beta-subunit of the SRP receptor (SR). Here, we report on the GTPase cycle of the beta-subunits of the SR (SRbeta). We found that SRbeta binds GTP with high affinity and interacts with ribosomes in the GTP-bound state. Subsequently, the ribosome increases the GTPase activity of SRbeta and thus functions as a GTPase activating protein for SRbeta. Furthermore, the interaction between SRbeta and the ribosome leads to a reduction in the affinity of SRbeta for guanine nucleotides. We propose that SRbeta regulates the interaction of SR with the ribosome and thereby allows SRalpha to scan membrane-bound ribosomes for the presence of SRP. Interaction between SRP and SRalpha then leads to release of the signal sequence from SRP and insertion into the translocon. GTP hydrolysis then results in dissociation of SR from the ribosome, and SRP from the SR.


Subject(s)
GTP Phosphohydrolases/metabolism , Guanosine Triphosphate/metabolism , Receptors, Cytoplasmic and Nuclear/metabolism , Receptors, Peptide/metabolism , Ribosomes/metabolism , Animals , Binding Sites , Dogs , Endoplasmic Reticulum, Rough/metabolism , GTPase-Activating Proteins , Guanosine Diphosphate/metabolism , Guanylyl Imidodiphosphate/metabolism , Hydrolysis , Liposomes/metabolism , Membrane Glycoproteins/metabolism , Membrane Proteins/metabolism , Microsomes , Models, Biological , Molecular Chaperones , Protein Binding , Proteins/metabolism , Receptors, Cytoplasmic and Nuclear/genetics , Receptors, Peptide/genetics , SEC Translocation Channels , Sequence Deletion , Trans-Activators/metabolism
18.
J Bacteriol ; 181(13): 3956-66, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10383963

ABSTRACT

The composition and fine structure of the vegetative cell wall peptidoglycan from Bacillus subtilis were determined by analysis of its constituent muropeptides. The structures of 39 muropeptides, representing 97% of the total peptidoglycan, were elucidated. About 99% analyzed muropeptides in B. subtilis vegetative cell peptidoglycan have the free carboxylic group of diaminopimelic acid amidated. Anhydromuropeptides and products missing a glucosamine at the nonreducing terminus account for 0.4 and 1.5%, respectively, of the total muropeptides. These two types of muropeptides are suggested to end glycan strands. An unexpected feature of B. subtilis muropeptides was the occurrence of a glycine residue in position 5 of the peptide side chain on monomers or oligomers, which account for 2.7% of the total muropeptides. This amount is, however, dependent on the composition of the growth media. Potential attachment sites for anionic polymers to peptidoglycan occur on dominant muropeptides and account for 2.1% of the total. B. subtilis peptidoglycan is incompletely digested by lysozyme due to de-N-acetylation of glucosamine, which occurs on 17.3% of muropeptides. The cross-linking index of the polymer changes with the growth phase. It is highest in late stationary phase, with a value of 33.2 or 44% per muramic acid residue, as determined by reverse-phase high-pressure liquid chromatography or gel filtration, respectively. Analysis of the muropeptide composition of a dacA (PBP 5) mutant shows a dramatic decrease of muropeptides with tripeptide side chains and an increase or appearance of muropeptides with pentapeptide side chains in monomers or oligomers. The total muropeptides with pentapeptide side chains accounts for almost 82% in the dacA mutant. This major low-molecular-weight PBP (DD-carboxypeptidase) is suggested to play a role in peptidoglycan maturation.


Subject(s)
Bacillus subtilis/chemistry , Bacterial Proteins , Carrier Proteins/metabolism , Cell Wall/chemistry , Hexosyltransferases , Muramoylpentapeptide Carboxypeptidase/metabolism , Peptidoglycan/chemistry , Peptidyl Transferases , Alanine/analysis , Bacillus subtilis/growth & development , Cell Wall/metabolism , Chromatography, High Pressure Liquid , Culture Media , Diaminopimelic Acid/analysis , Glucose/analysis , Glutamic Acid/analysis , Glycine/analysis , Muramic Acids/analysis , Penicillin-Binding Proteins , Peptidoglycan/metabolism , Sequence Analysis
19.
J Bacteriol ; 181(12): 3710-5, 1999 Jun.
Article in English | MEDLINE | ID: mdl-10368145

ABSTRACT

The peptidoglycan (murein) of Helicobacter pylori has been investigated by high-performance liquid chromatography and mass spectrometric techniques. Murein from H. pylori corresponded to the A1gamma chemotype, but the muropeptide elution patterns were substantially different from the one for Escherichia coli in that the former produced high proportions of muropeptides with a pentapeptide side chain (about 60 mol%), with Gly residues as the C-terminal amino acid (5 to 10 mol%), and with (1-->6)anhydro-N-acetylmuramic acid (13 to 18 mol%). H. pylori murein also lacks murein-bound lipoprotein, trimeric muropeptides, and (L-D) cross-linked muropeptides. Cessation of growth and transition to coccoid shape triggered an increase in N-acetylglucosaminyl-N-acetylmuramyl-L-Ala-D-Glu (approximately 20 mol%), apparently at the expense of monomeric muropeptides with tri- and tetrapeptide side chains. Muropeptides with (1-->6)anhydro-muramic acid and with Gly were also more abundant in resting cells.


Subject(s)
Helicobacter pylori/cytology , Peptidoglycan/chemistry , Cell Wall/ultrastructure , Chromatography, High Pressure Liquid , Dimerization , Galactose/metabolism , Glycosylation , Helicobacter pylori/growth & development , Molecular Structure , Peptides/chemistry , Peptides/isolation & purification , Peptidoglycan/isolation & purification , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Time Factors
20.
Opt Lett ; 24(5): 342-4, 1999 Mar 01.
Article in English | MEDLINE | ID: mdl-18071500

ABSTRACT

The responsivity at a constant detection area of non-steady-state photoinduced electromotive force (photo-emf) detectors is improved by a factor equal to the number of contact pairs contained in asymmetric interdigitated surface contacts. The polar nature of photo-emf current generation requires contact asymmetry in which one increases the total signal by blocking the illumination between alternate contact pairs, in distinct contrast to the behavior of conventional interdigitated contacts fabricated upon isotropic photoconductors.

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