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1.
Solid State Nucl Magn Reson ; 42: 26-32, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22336040

ABSTRACT

The effectiveness of two different selective inversion methods is investigated to determine timescales of Li ion mobility in paramagnetic Li intercalation materials. The first method is 1D exchange spectroscopy, which employs a 90°-τ(1)-90° sequence for selective inversion of a Li resonance undergoing site exchange. The experiment is most easily applied when the first delay period, τ(1), is set to the frequency difference between two resonances undergoing ion exchange. This enables the determination of ion hopping timescales for single exchange pair systems only. To measure ion dynamics in systems having more than one exchange process, a second selective inversion method was tested on two paramagnetic Li intercalation materials. This second technique, replaces the 90°-τ(1)-90° portion of 1D EXSY with a long, selective shaped pulse (SP). Two paramagnetic solid-state materials, which are both cathode materials for lithion ion batteries, were chosen as model compounds to test the effectiveness of both the selective inversion methods. The first compound, Li(2)VPO(4)F, was chosen as it hosts two Li sites with 1-exchange process. The second model compound is a 3-site, 3-exchange process system, Li(2)VOPO(4). For the 2-site material, Li(2)VPO(4)F, the timescales of the single A-B exchange process were found to be within error of one another regardless of the inversion method. For the 3 Li-site material Li(2)VOPO(4), the three exchange processes, AB, BC, and AC, were found to be on the millisecond timescale as revealed using the SP method. These timescales were determined over a variable temperature range where activation energies extended from 0.6 ± 0.1 eV up to 0.9 ± 0.2 eV.


Subject(s)
Electric Power Supplies , Electrodes , Lithium/chemistry , Magnetic Resonance Spectroscopy/methods , Materials Testing/methods , Energy Transfer , Ions
2.
Biochem Cell Biol ; 76(2-3): 171-6, 1998.
Article in English | MEDLINE | ID: mdl-9923686

ABSTRACT

NMR is a vital tool for measuring the dynamics of biological macromolecules in solution. The chemical exchange observed is often divided into slow or intermediate exchange. Slow exchange affects principally the z magnetizations of the system and is observed in modified spin-lattice relaxation experiments. Intermediate exchange gives rise to broadening and coalescence in the spectrum itself. This broadened spectrum is often considered as a whole, but we have shown that it is better to regard it as a sum of transitions, with a generalized picture of the transition probability. In this paper, we give explicit expressions for the lineshape for two sites and review some of the recent applications of chemical exchange in biochemical NMR.


Subject(s)
Magnetic Resonance Spectroscopy/methods , Models, Chemical , Macromolecular Substances , Solutions , Time Factors
3.
J Biomol Struct Dyn ; 11(3): 509-28, 1993 Dec.
Article in English | MEDLINE | ID: mdl-8129870

ABSTRACT

With a view to understanding the structural requirement for tyrosine phosphorylation, we have examined the free and Ca(2+)-bound conformations of the synthetic peptide tBoc-Leu-Pro-Tyr-Ala-NHCH3, a substrate for a protein tyrosine kinase, using circular dichroism (CD), 1H and 13C nuclear magnetic resonance (NMR) and molecular modeling methods. CD spectrum of the free peptide in water showed a random coil structure, while the spectrum in acetonitrile was indicative of a folded structure containing a type III beta-turn. Dihedral angle data derived from JNH-CH coupling constants, as well as two-dimensional 1H-COSY and NOESY spectral analyses, showed that the peptide adopts a conformation close to the 3(10)-helix. Ca2+ binding by the peptide, as monitored by CD spectral changes, was quite weak in water. However, substantial CD spectral changes were observed in the peptide on addition of Ca2+ in acetonitrile suggestive of major conformational alterations due to Ca2+ binding. Analysis of the binding isotherms at 25 degrees C obtained from CD data in acetonitrile indicated a 2:1 peptide:Ca2+ ("sandwich") complex to be the dominant species with a Kd of about 30 microM. A 1:1 complex was also present and became significant at Ca2+:peptide ratios above 1. By comparison, the peptide formed a predominantly 1:1 complex with Mg2+ with a Kd of about 40 microM. 13C-NMR data showed that a mixture of cis and trans conformers (arising from rotation around the Leu-Pro bond) in the free peptide changes over to the all-trans form on coordination of the peptide carbonyl groups to the Ca2+ ion. 1H-NOESY data of the Ca2+ complex revealed several interactions involving the sidechains of two peptide molecules in the sandwich. Molecular modeling and energy minimization with and without the input of NOESY-derived distance constraints showed the sandwich complex to be an energetically very favourable conformation. Besides its relevance in terms of the possible involvement of divalent cations in substrate-tyrosine kinase interaction, the conformational characterization of tBoc-Leu-Pro-Tyr-Ala-NHCH3 and its Ca2+ complex should help understand the conformational determinants for Ca(2+)-binding by linear peptides.


Subject(s)
Calcium/metabolism , Oligopeptides/metabolism , Protein-Tyrosine Kinases/metabolism , Amino Acid Sequence , Binding Sites , Circular Dichroism , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Sequence Data , Monte Carlo Method , Oligopeptides/chemical synthesis , Oligopeptides/chemistry , Protein Conformation , Substrate Specificity
4.
Arch Dis Child ; 62(9): 951-6, 1987 Sep.
Article in English | MEDLINE | ID: mdl-3674948

ABSTRACT

Three hundred and fifty eight infants from south east Scotland who died suddenly were classified into four groups. Categories for these groups ranged from where a definite cause of death had been recorded to where no explanation had been provided and no associated disorder was discovered (SIDS). Our results supported the view that there are few differences in the history of cases certified as SIDS and other cases reported as dying suddenly but with an explanation. Groups that most closely matched the SIDS definition employed were reported to be healthier throughout life and freer from illness in the 48 hours before death. From the findings of this study the 'true' SIDS group did not appear as an 'at risk' population. The study group as a whole was not marked by social deprivation, poor mothering, or less privileged families. The importance of intensive investigation, including postmortem examination was emphasised, as misdiagnosis may give a 'falsely' inflated picture of the incidence of the syndrome and could cause unnecessary anxiety.


Subject(s)
Sudden Infant Death/epidemiology , Birth Order , Birth Weight , Female , Humans , Infant , Infant, Newborn , Male , Maternal Age , Scotland , Seasons , Sex Factors , Smoking , Social Class , Sudden Infant Death/etiology
5.
Steroids ; 48(3-4): 267-77, 1986.
Article in English | MEDLINE | ID: mdl-3445282

ABSTRACT

This paper presents a complete analysis of the proton and carbon-13 NMR spectra of 21-acetoxy-6 alpha,9-difluoro-11 beta-hydroxy-16 alpha,17-(1-methylethylidene) bis-(oxy) pregna-1,4-diene-3,20-dione, a potent anti-inflammatory fluorosteroid. The 300 MHz proton spectrum was analyzed using a combination of the two-dimensional homonuclear chemical shift correlation (COSY) technique and one-dimensional NOE difference spectra. Exact coupling constants and chemical shifts were obtained by spectral simulation and iteration. The carbon-13 spectrum was assigned from the proton spectrum via a two-dimensional heteronuclear chemical shift experiment, and long-range fluorine-proton couplings were confirmed by a fully coupled heteronuclear COSY-type experiment.


Subject(s)
Fluocinolone Acetonide , Fluocinonide , Magnetic Resonance Spectroscopy , Chemical Phenomena , Chemistry , Fluocinolone Acetonide/analogs & derivatives
7.
Biochem Genet ; 23(11-12): 1011-28, 1985 Dec.
Article in English | MEDLINE | ID: mdl-4084207

ABSTRACT

The expression of the GST1, GST2, and GST3 loci in fetal, neonatal, and infant tissues has been studied using starch gel electrophoresis and chromatofocusing. Each locus demonstrated developmental changes in expression, some of which were specific to a single tissue while others occurred in several tissues. GST1 was not usually expressed in any of the tissues studied before 30 weeks of gestation but steadily increased thereafter until adult levels were reached in late infancy. In neonates and older infants the frequencies of the GST1*0, GST1*1, and GST1*2 alleles were 0.79, 0.07, and 0.14, respectively. GST2 was always expressed in liver and adrenal but was only weakly expressed in spleen, cardiac muscle, and diaphragm. In kidney this locus was not usually expressed until nearly 1 year after birth. The GST3 isoenzymes were present in all fetal, neonatal, and infant tissues, although their expression in liver decreased after 30 weeks of gestation. Other isoenzymes with fast anodal mobilities were also identified in several tissues; these are believed to be GST3 isoenzymes that have undergone posttranslational modification rather than products of the putative GST4 locus. No specifically fetal isoenzymes were detected.


Subject(s)
Glutathione Transferase/isolation & purification , Isoenzymes/isolation & purification , Chromatography , Cytosol/enzymology , Electrophoresis, Starch Gel , Embryo, Mammalian/enzymology , Female , Fetus/enzymology , Gene Expression Regulation , Gestational Age , Glutathione Transferase/biosynthesis , Glutathione Transferase/genetics , Growth , Humans , Infant , Infant, Newborn , Isoenzymes/biosynthesis , Isoenzymes/genetics , Organ Specificity , Pregnancy
9.
Prenat Diagn ; 5(1): 73-6, 1985.
Article in English | MEDLINE | ID: mdl-3883343

ABSTRACT

A pleural effusion associated with congenital pulmonary lymphangiectasia was detected in a fetus in utero but was absent at the time of delivery. The pleural effusion was unilateral although the disease involved both lungs. In this case there was an association between polyhydramnios and congenital pulmonary lymphangiectasia.


Subject(s)
Fetal Diseases/diagnosis , Lung Diseases/congenital , Lymphangiectasis/congenital , Pleural Effusion/diagnosis , Prenatal Diagnosis , Ultrasonography , Adult , Female , Humans , Infant, Newborn , Lung Diseases/diagnosis , Lymphangiectasis/diagnosis , Male , Polyhydramnios/diagnosis , Pregnancy
11.
J Med Genet ; 21(1): 39-44, 1984 Feb.
Article in English | MEDLINE | ID: mdl-6229635

ABSTRACT

The results of chromosome analyses on 500 cases of perinatal deaths are reported. It was found that 4.8% were chromosomally abnormal, but 90% of the chromosomally abnormal were either clinically malformed or macerated fetuses. Of the macerated fetuses, 9% were chromosomally abnormal and of these 33% had trisomy 21. The data suggest that the high loss of trisomy 21 fetuses in later stages of pregnancy is of an order sufficient to explain the discrepancy between the higher numbers of trisomy 21 detected during amniotic fluid sampling than found at birth in women of 35 years and over.


Subject(s)
Chromosome Aberrations , Fetal Death/genetics , Infant Mortality , Adolescent , Adult , Chromosomes, Human, 13-15 , Chromosomes, Human, 16-18 , Down Syndrome/epidemiology , Down Syndrome/genetics , Female , Fetal Death/epidemiology , Humans , Infant, Newborn , Male , Maternal Age , Pregnancy , Scotland , Sex Ratio , Trisomy
13.
J Clin Pathol ; 36(9): 1000-4, 1983 Sep.
Article in English | MEDLINE | ID: mdl-6224822

ABSTRACT

Lysosomal enzyme activities were studied in cells derived from the following types of leukaemia: chronic myeloid, acute myeloid, acute myelomonocytic, acute monocytic, non-T, non-B cell acute lymphoblastic, T-cell acute lymphoblastic, B-cell chronic lymphocytic and T-cell chronic lymphocytic. Activities of beta-hexosaminidase and alpha-mannosidase were significantly higher in cells from acute monocytic and acute myelomonocytic leukaemias, and somewhat higher in the other myeloid leukaemias, when compared with control granulocytes. Activities of beta-hexosaminidase, alpha-mannosidase, alpha-fucosidase, beta-glucuronidase and acid phosphatase were markedly lower in B cells of chronic lymphocytic leukaemia when compared with control or other leukaemic lymphoid cells. On isoelectric focusing abnormal patterns of beta-hexosaminidase, alpha-mannosidase and beta-glucuronidase activities were commonly found in myeloid and non-T, non-B cell leukaemias. All patients with acute myeloid leukaemia exhibited a relative decrease in the B form of beta-hexosaminidase activity. The results described show that studies on lysosomal enzymes may assist in the classification of different types of leukaemia.


Subject(s)
Leukemia/enzymology , Lysosomes/enzymology , Adult , Hexosaminidases/metabolism , Humans , Hydrolases , Isoelectric Focusing , Mannosidases/metabolism , alpha-Mannosidase , beta-N-Acetylhexosaminidases
15.
Clin Genet ; 22(1): 30-6, 1982 Jul.
Article in English | MEDLINE | ID: mdl-6756711

ABSTRACT

A chromosome abnormality, 46,XY,1p+, was detected in cultured amniotic fluid cells. The chromosomes of both parents were normal and it was impossible to recognise the extra chromosomal material using current banding techniques. The activity of acid alpha-glucosidase was found to be consistently higher than controls whereas activity of several other lysosomal enzymes, galactokinase and thymidine kinase was not. The results suggest that the extra material is that part of the long arm of chromosome 17 bearing the gene for acid alpha-glucosidase but not the genes for galactokinase and thymidine kinase. This would narrow the assignment of the acid alpha-glucosidase locus to 17q22 leads to 17 qter.


Subject(s)
Chromosome Aberrations/enzymology , Chromosomes, Human, 1-3 , Translocation, Genetic , Cells, Cultured , Chromosome Disorders , Genes , Hexosaminidases/genetics , Humans , Karyotyping , alpha-Glucosidases/genetics , alpha-L-Fucosidase/genetics
19.
Ann Hum Genet ; 42(2): 173-81, 1978 Oct.
Article in English | MEDLINE | ID: mdl-569457

ABSTRACT

The results of chromosome studies from 1193 consecutive paediatric necropsies in Edinburgh and 331 in Adelaide are given. In the Edinburgh series 51 major chromosome abnormalities were detected in 780 (6.5%) necropsies where chromosome studies were successful and in Adelaide 16 in 295 (5.4%) were found. It is suggested that chromosome studies should become an integral part of the paediatric necropsy except for deaths due to primary central nervous system lesions and trauma.


Subject(s)
Chromosome Aberrations/epidemiology , Fetal Death/genetics , Australia , Autopsy , Child , Child, Preschool , Chromosome Disorders , Chromosome Mapping , Female , Humans , Infant , Infant Mortality , Infant, Newborn , Karyotyping , Male , Mosaicism , Pregnancy , Scotland
20.
Clin Chim Acta ; 88(2): 229-36, 1978 Sep 01.
Article in English | MEDLINE | ID: mdl-699319

ABSTRACT

A chromogenic substrate, 2-hexadecanoylamino-4-nitrophenyl-beta-D-galactopyranoside, has recently been described for the diagnosis of Krabbe's disease. Hydrolysis of this substrate by extracts of cultured cells and tissues was compared with the activities of lactocerebrosidase I and non-specific beta-galactosidase. Under appropriate conditions, hydrolysis of the chromogenic analogue was markedly reduced in extracts of cultured amniotic fluid cells and skin fibroblasts derived from cases of Krabbe's disease. Activity was also markedly deficient in extracts of Krabbe's brain, although only a partial reduction was measured in liver extracts. Generally activities were higher in tissues of fetal origion. Unfortunately, the new analogue proved less specific and less sensitive than the natural substrates used to diagnose Krabbe's disease. Consequently, the analogue does not provide a satisfactory alternative substrate for the prenatal diagnosis of Krabbe's disease.


Subject(s)
Clinical Enzyme Tests , Galactosamine/analogs & derivatives , Galactosidases/metabolism , Leukodystrophy, Globoid Cell/diagnosis , Prenatal Diagnosis , Adolescent , Amniotic Fluid/cytology , Brain/enzymology , Cells, Cultured , Child, Preschool , Female , Fibroblasts/enzymology , Humans , Infant , Infant, Newborn , Liver/enzymology , Male , Pregnancy , Skin/enzymology
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