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1.
Thromb Haemost ; 118(10): 1713-1728, 2018 Oct.
Article in English | MEDLINE | ID: mdl-30235482

ABSTRACT

Components of the intrinsic blood coagulation pathway, among them factor VIIIa (FVIIIa), have been recognized as suitable therapeutic targets to treat venous thromboembolism, pathological process behind two very serious cardiovascular diseases, deep vein thrombosis and pulmonary embolism. Here, we describe a unique glycoprotein from the nose-horned viper (Vipera ammodytes ammodytes [Vaa]) venom, Vaa serine proteinase homolog 1 (VaaSPH-1), structurally a serine protease but without an enzymatic activity and expressing potent anticoagulant action in human blood. We demonstrated that one of its targets in the blood coagulation system is FVIIIa of the intrinsic tenase complex, where it antagonizes the binding of FIXa. Anticoagulants with such characteristics are intensively sought, as they would be much safer for medical application as the contemporary drugs, which frequently induce excessive bleeding and other complications. VaaSPH-1 is unlikely to be orally available for chronic usage as it has molecular mass of 35 kDa. However, it represents a very promising template to design low molecular mass FVIIIa-directed anticoagulant substances, based on structural features of the interaction surface between VaaSPH-1 and FVIIIa. To this end, we constructed a three-dimensional model of VaaSPH-1 bound to FVIIIa. The model exposes the 157-loop and the preceding α-helix as the most appropriate structural elements of VaaSPH-1 to be considered as a guideline to synthesize small FVIIIa-binding molecules, potential new generation of anticoagulants.


Subject(s)
Cysteine Endopeptidases/metabolism , Neoplasm Proteins/metabolism , Reptilian Proteins/metabolism , Serine Proteases/metabolism , Venous Thromboembolism/drug therapy , Viper Venoms/metabolism , Animals , Blood Coagulation , Drug Design , Factor VIIIa/metabolism , Humans , Models, Chemical , Platelet Aggregation , Protein Binding , Structure-Activity Relationship , Viperidae/immunology
2.
Biochimie ; 109: 78-87, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25549999

ABSTRACT

A high molecular mass metalloproteinase with α-fibrinogenolytic activity, termed VaF1, was purified from nose-horned viper (Vipera ammodytes ammodytes) venom. Subcutaneous injection of 9 µg of VaF1 did not induce bleeding in rats. Nevertheless, in vitro it degraded collagen IV, nidogen and fibronectin, components of the extracellular matrix, although with low efficacy and narrow specificity. VaF1 would be expected to exert anti-coagulant action, due to its hydrolysis of fibrinogen, factor X, prothrombin and plasminogen, plasma proteins involved in blood coagulation. The enzyme is a single-chain glycoprotein with a molecular mass of 49.7 kDa, as determined by mass spectrometry, and multiple isoelectric points centred at pH 5.8. The complete amino acid sequence of the precursor of VaF1 was deduced by cloning and sequencing its cDNA. Composed of metalloproteinase, disintegrin-like and cysteine-rich domains, VaF1 is a typical P-IIIa subclass snake venom metalloproteinase. Although it possesses a collagen-binding sequence in its disintegrin-like domain, VaF1 displayed no effect on collagen-induced platelet aggregation in vitro. Two consensus N-glycosylation sites are present in the sequence of VaF1, however, the extent of its glycosylation is low, only 5.2% of the total molecular mass. Interestingly, in standard experimental conditions VaF1 is not recognised by antiserum against the whole venom, so it can contribute to post-serotherapy complications, such as ineffective blood coagulation, in the envenomed patient.


Subject(s)
Fibrinogen/metabolism , Metalloproteases/metabolism , Viper Venoms/enzymology , Viperidae/metabolism , Amino Acid Sequence , Animals , Base Sequence , Blotting, Western , Cattle , Collagen Type IV/metabolism , Electrophoresis, Polyacrylamide Gel , Factor X/metabolism , Fibronectins/metabolism , Hydrolysis , Immune Sera/immunology , Immune Sera/metabolism , Metalloproteases/chemistry , Metalloproteases/genetics , Molecular Sequence Data , Plasminogen/metabolism , Protein Structure, Secondary , Proteolysis , Prothrombin/metabolism , Rabbits , Sequence Homology, Amino Acid , Viper Venoms/immunology , Viperidae/genetics
3.
Eur J Med Chem ; 39(3): 257-65, 2004 Mar.
Article in English | MEDLINE | ID: mdl-15051174

ABSTRACT

The design, synthesis and biological activity of a series of novel non-covalent D-Phe-Pro-Arg motif-based thrombin inhibitors incorporating 4,5,6,7-tetrahydrobenzothiazol-2-amine as a novel arginine surrogate are described. Compound 9, the most potent in the series of thrombin inhibitors, exhibited an in vitro K(i) of 128 nM and 342-fold selectivity against trypsin. The binding mode of this novel class of thrombin inhibitors in the enzyme active site, based on the X-ray crystal structure of compound 9 co-crystallized with human alpha-thrombin, is discussed.


Subject(s)
Arginine/chemistry , Biomimetic Materials/pharmacology , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Thiazoles/pharmacology , Thrombin/antagonists & inhibitors , Trypsin/metabolism , Binding Sites , Biomimetic Materials/chemistry , Crystallography, X-Ray , Humans , Models, Molecular , Molecular Structure , Protein Binding , Structure-Activity Relationship , Substrate Specificity , Thrombin/metabolism
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