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1.
Heliyon ; 9(10): e20540, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37842622

ABSTRACT

The use of masks as a measure to control the spread of respiratory viruses has been widely acknowledged. However, there are instances where wearing a mask is not possible, making these environments potential vectors for virus transmission. Such environments can contain multiple sources of infection and are challenging to characterize in terms of infection risk. To address this issue, we have developed a methodology to investigate the role of ventilation in reducing the infection risk in such environments. We use a restaurant setting as a representative scenario to demonstrate the methodology. Using implicit large eddy simulations along with discrete droplet dispersion modeling we investigate the impact of ventilation and physical distance on the spread of respiratory viruses and the risk of infection. Our findings show that operating ventilation systems, such as mechanical mixing and increasing physical distance between subjects, can significantly reduce the average room infection risk and number of newly infected subjects. However, this observation is subject to the transmissibility of the airborne viruses. In the case of a highly transmissible virus, the use of mechanical mixing may be inconsequential when compared to only fresh air ventilation. These findings provide valuable insights into the mitigation of infection risk in situations where the use of masks is not possible.

2.
PLoS Comput Biol ; 19(3): e1010972, 2023 03.
Article in English | MEDLINE | ID: mdl-36940207

ABSTRACT

As evidenced by the worldwide pandemic, respiratory infectious diseases and their airborne transmission must be studied to safeguard public health. This study focuses on the emission and transport of speech-generated droplets, which can pose risk of infection depending on the loudness of the speech, its duration and the initial angle of exhalation. We have numerically investigated the transport of these droplets into the human respiratory tract by way of a natural breathing cycle in order to predict the infection probability of three strains of SARS-CoV-2 on a person who is listening at a one-meter distance. Numerical methods were used to set the boundary conditions of the speaking and breathing models and large eddy simulation (LES) was used for the unsteady simulation of approximately 10 breathing cycles. Four different mouth angles when speaking were contrasted to evaluate real conditions of human communication and the possibility of infection. Breathed virions were counted using two different approaches: the breathing zone of influence and direction deposition on the tissue. Our results show that infection probability drastically changes based on the mouth angle and the breathing zone of influence overpredicts the inhalation risk in all cases. We conclude that to portray real conditions, the probability of infection should be based on direct tissue deposition results to avoid overprediction and that several mouth angles must be considered in future analyses.


Subject(s)
COVID-19 , SARS-CoV-2 , Humans , Respiratory System , Administration, Inhalation , Respiration
3.
Sports Biomech ; : 1-15, 2022 Dec 12.
Article in English | MEDLINE | ID: mdl-36510445

ABSTRACT

This study was designed to develop a computational fluid dynamics (CFD) method for unsteady analysis of a series of ski jump movements with attitude changes, and to analyse the aerodynamic characteristics of an expert jumper over the entire ski jump movement. Two ski jumpers participated in this study. A sensor-based motion capture suit was used to capture the jumper's posture during the actual ski jump. A three-dimensional computer graphics animation was created by superimposing the joint angles obtained from the motion measurements of the 3D shape of the athlete. The unsteady aerodynamic forces acting on the ski jumper, from the takeoff to the landing, were then calculated using CFD. A time-varying spatially uniform flow was specified as the inflow boundary condition of the computational domain. The results indicated that both the lift and drag forces of the expert jumper increase rapidly during the initial flight when the jumper's posture changes drastically. Thereafter, drag force decreased considerably, but the decrease in the lift force was less drastic. Later in the flight phase, the lift force acting on the expert jumper increased, and throughout the flight phase, the lift-drag ratio of the expert jumper remained higher than that of the unskilled jumper.

4.
Sci Rep ; 12(1): 11186, 2022 07 01.
Article in English | MEDLINE | ID: mdl-35778513

ABSTRACT

The dose-response model has been widely used for quantifying the risk of infection of airborne diseases like COVID-19. The model has been used in the room-average analysis of infection risk and analysis using passive scalars as a proxy for aerosol transport. However, it has not been employed for risk estimation in numerical simulations of droplet dispersion. In this work, we develop a framework for the evaluation of the probability of infection in droplet dispersion simulations using the dose-response model. We introduce a version of the model that can incorporate the higher transmissibility of variant strains of SARS-CoV2 and the effect of vaccination in evaluating the probability of infection. Numerical simulations of droplet dispersion during speech are carried out to investigate the infection risk over space and time using the model. The advantage of droplet dispersion simulations for risk evaluation is demonstrated through the analysis of the effect of ambient wind, humidity on infection risk, and through a comparison with risk evaluation based on passive scalars as a proxy for aerosol transport.


Subject(s)
COVID-19 , Infections , Administration, Inhalation , Aerosols/adverse effects , Humans , RNA, Viral , SARS-CoV-2
5.
Int J High Perform Comput Appl ; 36(5-6): 568-586, 2022 Nov.
Article in English | MEDLINE | ID: mdl-38603243

ABSTRACT

The fastest supercomputer in 2020, Fugaku, has not only achieved digital transformation of epidemiology in allowing end-to-end, detailed quantitative modeling of COVID-19 transmissions for the first time but also transformed the behavior of the entire Japanese public through its detailed analysis of transmission risks in multitudes of societal situations entailing heavy risks. A novel aerosol simulation methodology was synthesized out of a combination of a new CFD methods meeting industrial demands in the solver, CUBE (Jansson et al., 2019), which not only allowed the simulations to scale massively with high resolution required for micrometer virus-containing aerosol particles but also enabled extremely rapid time-to-solution due to its ability to generate the digital twins representing multitudes of societal situations in a matter of minutes, attaining true overall application high performance; such simulations have been running for the past 1.5°years on Fugaku, cumulatively consuming top supercomputer-class resources and the communicated by the media as well as becoming the basis for official public policies.

6.
PLoS One ; 12(6): e0179727, 2017.
Article in English | MEDLINE | ID: mdl-28654649

ABSTRACT

What wavelengths do undulatory swimmers use during propulsion? In this work we find that a wide range of body/caudal fin (BCF) swimmers, from larval zebrafish and herring to fully-grown eels, use specific wavelength (ratio of wavelength to tail amplitude of undulation) values that fall within a relatively narrow range. The possible emergence of this constraint is interrogated using numerical simulations of fluid-structure interaction. Based on these, it was found that there is an optimal specific wavelength (OSW) that maximizes the swimming speed and thrust generated by an undulatory swimmer. The observed values of specific wavelength for BCF animals are relatively close to this OSW. The mechanisms underlying the maximum propulsive thrust for BCF swimmers are quantified and are found to be consistent with the mechanisms hypothesized in prior work. The adherence to an optimal value of specific wavelength in most natural hydrodynamic propulsors gives rise to empirical design criteria for man-made propulsors.


Subject(s)
Animal Fins/physiology , Models, Biological , Swimming/physiology , Animals , Biomechanical Phenomena/physiology , Species Specificity
7.
PLoS Biol ; 13(4): e1002123, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25919026

ABSTRACT

Examples of animals evolving similar traits despite the absence of that trait in the last common ancestor, such as the wing and camera-type lens eye in vertebrates and invertebrates, are called cases of convergent evolution. Instances of convergent evolution of locomotory patterns that quantitatively agree with the mechanically optimal solution are very rare. Here, we show that, with respect to a very diverse group of aquatic animals, a mechanically optimal method of swimming with elongated fins has evolved independently at least eight times in both vertebrate and invertebrate swimmers across three different phyla. Specifically, if we take the length of an undulation along an animal's fin during swimming and divide it by the mean amplitude of undulations along the fin length, the result is consistently around twenty. We call this value the optimal specific wavelength (OSW). We show that the OSW maximizes the force generated by the body, which also maximizes swimming speed. We hypothesize a mechanical basis for this optimality and suggest reasons for its repeated emergence through evolution.


Subject(s)
Biological Evolution , Invertebrates/physiology , Swimming , Vertebrates/physiology , Water , Animals , Biomechanical Phenomena
8.
Sci Rep ; 4: 7329, 2014 Dec 10.
Article in English | MEDLINE | ID: mdl-25491270

ABSTRACT

For nearly a century, researchers have tried to understand the swimming of aquatic animals in terms of a balance between the forward thrust from swimming movements and drag on the body. Prior approaches have failed to provide a separation of these two forces for undulatory swimmers such as lamprey and eels, where most parts of the body are simultaneously generating drag and thrust. We nonetheless show that this separation is possible, and delineate its fundamental basis in undulatory swimmers. Our approach unifies a vast diversity of undulatory aquatic animals (anguilliform, sub-carangiform, gymnotiform, bal-istiform, rajiform) and provides design principles for highly agile bioinspired underwater vehicles. This approach has practical utility within biology as well as engineering. It is a predictive tool for use in understanding the role of the mechanics of movement in the evolutionary emergence of morphological features relating to locomotion. For example, we demonstrate that the drag-thrust separation framework helps to predict the observed height of the ribbon fin of electric knifefish, a diverse group of neotropical fish which are an important model system in sensory neurobiology. We also show how drag-thrust separation leads to models that can predict the swimming velocity of an organism or a robotic vehicle.


Subject(s)
Fishes/physiology , Models, Biological , Swimming/physiology , Animals , Fishes/anatomy & histology
9.
Sci Rep ; 4: 5904, 2014 Jul 31.
Article in English | MEDLINE | ID: mdl-25082341

ABSTRACT

Nearly eighty years ago, Gray reported that the drag power experienced by a dolphin was larger than the estimated muscle power - this is termed as Gray's paradox. We provide a fluid mechanical perspective of this paradox. The viewpoint that swimmers necessarily spend muscle energy to overcome drag in the direction of swimming needs revision. For example, in undulatory swimming most of the muscle energy is directly expended to generate lateral undulations of the body, and the drag power is balanced not by the muscle power but by the thrust power. Depending on drag model utilized, the drag power may be greater than muscle power without being paradoxical.


Subject(s)
Hydrodynamics , Swimming , Animals , Energy Metabolism , Humans , Models, Theoretical , Muscle Strength , Muscle, Skeletal/physiology
10.
Proc Natl Acad Sci U S A ; 111(21): 7517-21, 2014 May 27.
Article in English | MEDLINE | ID: mdl-24821764

ABSTRACT

Which animals use their energy better during movement? One metric to answer this question is the energy cost per unit distance per unit weight. Prior data show that this metric decreases with mass, which is considered to imply that massive animals are more efficient. Although useful, this metric also implies that two dynamically equivalent animals of different sizes will not be considered equally efficient. We resolve this longstanding issue by first determining the scaling of energy cost per unit distance traveled. The scale is found to be M(2/3) or M(1/2), where M is the animal mass. Second, we introduce an energy-consumption coefficient (CE) defined as energy per unit distance traveled divided by this scale. CE is a measure of efficiency of swimming and flying, analogous to how drag coefficient quantifies aerodynamic drag on vehicles. Derivation of the energy-cost scale reveals that the assumption that undulatory swimmers spend energy to overcome drag in the direction of swimming is inappropriate. We derive allometric scalings that capture trends in data of swimming and flying animals over 10-20 orders of magnitude by mass. The energy-consumption coefficient reveals that swimmers beyond a critical mass, and most fliers are almost equally efficient as if they are dynamically equivalent; increasingly massive animals are not more efficient according to the proposed metric. Distinct allometric scalings are discovered for large and small swimmers. Flying animals are found to require relatively more energy compared with swimmers.


Subject(s)
Energy Metabolism/physiology , Flight, Animal/physiology , Models, Biological , Movement/physiology , Swimming/physiology , Animals , Biomechanical Phenomena , Body Weight , Species Specificity
11.
J Exp Biol ; 217(Pt 2): 201-13, 2014 Jan 15.
Article in English | MEDLINE | ID: mdl-24072799

ABSTRACT

While wake structures of many forms of swimming and flying are well characterized, the wake generated by a freely swimming undulating fin has not yet been analyzed. These elongated fins allow fish to achieve enhanced agility exemplified by the forward, backward and vertical swimming capabilities of knifefish, and also have potential applications in the design of more maneuverable underwater vehicles. We present the flow structure of an undulating robotic fin model using particle image velocimetry to measure fluid velocity fields in the wake. We supplement the experimental robotic work with high-fidelity computational fluid dynamics, simulating the hydrodynamics of both a virtual fish, whose fin kinematics and fin plus body morphology are measured from a freely swimming knifefish, and a virtual rendering of our robot. Our results indicate that a series of linked vortex tubes is shed off the long edge of the fin as the undulatory wave travels lengthwise along the fin. A jet at an oblique angle to the fin is associated with the successive vortex tubes, propelling the fish forward. The vortex structure bears similarity to the linked vortex ring structure trailing the oscillating caudal fin of a carangiform swimmer, though the vortex rings are distorted because of the undulatory kinematics of the elongated fin.


Subject(s)
Animal Fins/anatomy & histology , Gymnotiformes/anatomy & histology , Swimming , Animal Fins/physiology , Animals , Biomechanical Phenomena , Computer Simulation , Gymnotiformes/physiology , Hydrodynamics , Models, Anatomic , Rheology , Robotics
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