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1.
Stud Health Technol Inform ; 289: 485-486, 2022 Jan 14.
Article in English | MEDLINE | ID: mdl-35062196

ABSTRACT

The German Corona Consensus (GECCO) established a uniform dataset in FHIR format for exchanging and sharing interoperable COVID-19 patient specific data between health information systems (HIS) for universities. For sharing the COVID-19 information with other locations that use openEHR, the data are to be converted in FHIR format. In this paper, we introduce our solution through a web-tool named "openEHR-to-FHIR" that converts compositions from an openEHR repository and stores in their respective GECCO FHIR profiles. The tool provides a REST web service for ad hoc conversion of openEHR compositions to FHIR profiles.


Subject(s)
COVID-19 , Electronic Health Records , Consensus , Delivery of Health Care , Humans , SARS-CoV-2
2.
Sci Rep ; 11(1): 10556, 2021 05 18.
Article in English | MEDLINE | ID: mdl-34006956

ABSTRACT

The spread of multidrug resistant organisms (MDRO) is a global healthcare challenge. Nosocomial outbreaks caused by MDRO are an important contributor to this threat. Computer-based applications facilitating outbreak detection can be essential to address this issue. To allow application reusability across institutions, the various heterogeneous microbiology data representations needs to be transformed into standardised, unambiguous data models. In this work, we present a multi-centric standardisation approach by using openEHR as modelling standard. Data models have been consented in a multicentre and international approach. Participating sites integrated microbiology reports from primary source systems into an openEHR-based data platform. For evaluation, we implemented a prototypical application, compared the transformed data with original reports and conducted automated data quality checks. We were able to develop standardised and interoperable microbiology data models. The publicly available data models can be used across institutions to transform real-life microbiology reports into standardised representations. The implementation of a proof-of-principle and quality control application demonstrated that the new formats as well as the integration processes are feasible. Holistic transformation of microbiological data into standardised openEHR based formats is feasible in a real-life multicentre setting and lays the foundation for developing cross-institutional, automated outbreak detection systems.


Subject(s)
Cross Infection/microbiology , Drug Resistance, Microbial , Electronic Health Records/standards , Computer Simulation , Cross Infection/epidemiology , Disease Outbreaks , Humans , Interinstitutional Relations , Proof of Concept Study , Reference Standards
4.
Stud Health Technol Inform ; 267: 59-65, 2019 Sep 03.
Article in English | MEDLINE | ID: mdl-31483255

ABSTRACT

The Logical Observation Identifiers, Names and Codes (LOINC) is a common terminology used for standardizing laboratory terms. Within the consortium of the HiGHmed project, LOINC is one of the central terminologies used for health data sharing across all university sites. Therefore, linking the LOINC codes to the site-specific tests and measures is one crucial step to reach this goal. In this work we report our ongoing efforts in implementing LOINC to our laboratory information system and research infrastructure, as well as our challenges and the lessons learned. 407 local terms could be mapped to 376 LOINC codes of which 209 are already available to routine laboratory data. In our experience, mapping of local terms to LOINC is a widely manual and time consuming process for reasons of language and expert knowledge of local laboratory procedures.


Subject(s)
Logical Observation Identifiers Names and Codes , Clinical Laboratory Information Systems , Laboratories , Universities
5.
Stud Health Technol Inform ; 258: 146-150, 2019.
Article in English | MEDLINE | ID: mdl-30942733

ABSTRACT

BACKGROUND: The nationwide data infrastructure project HiGHmed strives for achieving semantic interoperability through the use of openEHR archetypes. Therefore, a knowledge governance framework defining collaborative modelling processes has been established. For long-sustained success and the creation of high-quality archetypes, continuous monitoring is vital. OBJECTIVES: To present an update on archetype modelling and governance framework establishment in HiGHmed. METHODS: Qualitative and quantitative analyses of the progress in establishing modelling groups, roles and users, realizing modelling workflows, and modelling archetypes. RESULTS: Currently, 25 modellers and 17 domain experts are participating. 79 archetypes have been identified, from which 69 are pre-existing and internationally published; completion rates of review rounds are satisfying but improvable. CONCLUSIONS: The governance framework is valuable to make the activities manageable and to accelerate modelling. Combined with highly engaged data stewards and clinicians, a reasonable number of archetypes have already been developed.


Subject(s)
Electronic Health Records , Semantics , Data Systems
6.
Stud Health Technol Inform ; 258: 247-248, 2019.
Article in English | MEDLINE | ID: mdl-30942760

ABSTRACT

The Logical Observation Identifiers, Names and Codes (LOINC) is a common terminology used for standardizing laboratory terms. Within the HiGHmed consortium, LOINC is used as a central terminology for health data sharing across all university hospital sites. Therefore, linking the LOINC codes to the site-specific tests and measures is one crucial step to reach this goal. In this work we report our ongoing work in implementing LOINC to the laboratory information system, our challenges and lessons learned.


Subject(s)
Clinical Laboratory Information Systems , Logical Observation Identifiers Names and Codes , Laboratories , Schools, Medical
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